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The map label for this gene is ybdL [H]

Identifier: 238028546

GI number: 238028546

Start: 3415018

End: 3416172

Strand: Reverse

Name: ybdL [H]

Synonym: bglu_1g30100

Alternate gene names: 238028546

Gene position: 3416172-3415018 (Counterclockwise)

Preceding gene: 238028548

Following gene: 238028545

Centisome position: 87.45

GC content: 70.82

Gene sequence:

>1155_bases
ATGCGCAATTCGTGCCGGATCGAGACCAAGCTGCCGCAAAGCGGCATTTCCGTCTTCTCCCGCATCGCGGAGCAGGCCGC
GCGGCACGATGCCGTGAACCTGTGGCAGGGCGCGCCGTCGTTCCCCGCCGACCCGGCGCTGATCGCCCGCGCCGAGCGGG
CGATGCGCTCGGGCCTGAATCAGTACGCGCCGATGGCCGGCTACGCGCCGCTCAGGGCGGTGCTCGCGGAGAAGACCGAG
CGCCTGCACGGCGCGCGCTACCGGCCCGACAGCGAGATCACGGTGACTGCCGGCGCGAGCGAGGCGATCTACGCGGCGAT
TGCGGCGCTCGTGCAGGCCGGCGACGAGGTGATCTTCTTCGAGCCCGCGTTCGAGGTATACGAGCCGTCGATCCGGCTGC
AGGGCGCCACGCCGGTGGCGCTCGGCATCCGCCTCGACACGCTGCGCATCGACTGGGACGAGGTGGCCGCCGCGATCACG
CCGCGCACCCGGATGATCATCGTCAACACGCCCCACAATCCCACCGGCGCGCTGCTCGACGCCGGCGACCTCGCGCGCCT
GGCCGCGCTCACGCGCGACACCGACATCGTGATCCTCTCCGACGAGGTGTACGAGCACATGGTCTATGACGGGCGCGAAC
ACCTGAGCCTCGCGCGCGTTCCCGAGCTGGCCGAACGCAGCGTGATCGCGCTGTCGCTCGGCAAGACCTATCACGCCACC
GGCTGGCGCGTCGGCTACTGCCTCGCGCCGGCCGAGCTGACCACCGAGATCCGGAAGGTGCACCAGTACGTGGTGTTCTC
CGCGCCCGCGCCGCTGCAGGCCGCGCTGGCCGAGGCGCTGGCCGAGCCGCACAGCTATCTCGGGCTCGCCGCGTTCTATC
AGCGCAAGCGCGACCTGCTCGTCGAGTCGATGGCCGGCTCGCGGCTGTCGGTCGTGCCGAGCGCCGGCGGCTTCTTCATG
CTGGTGCGCTTCGATCGGGTTTGCGCGCAGGGCGACGAGGCGTTCGCGATGGCGGTGCTGGAGCAGCATGGGGTCGGCAC
CATTCCGCTCGCGAGCTTCTACCAGGACCGGCGCGATACCGGCATGCTGCGCCTGAGCTTCTGCAAGGACGACGACACGC
TGCGCGAAGGCGGCCGGCGCCTCGCGGCGATCTAG

Upstream 100 bases:

>100_bases
GCGGGCCGTGCCTGGGCGCCGGCCGCGTTGCGTGGCGTGCCGCGATATGCCAACCTTGTCGCCCGCCGCCCCAGCGCGGT
CAGACCGAGGAGTTCACCGA

Downstream 100 bases:

>100_bases
CCCGGCCCTGCGGGCGGTTTCGACGGGATCGTCGGTTCGTTCCGGTATCGGCGATTGCGCCGCCTATGCCGCGGCGCGAC
CCTGCGGAATCGATGCCACC

Product: Aspartate/tyrosine/aromatic aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MRNSCRIETKLPQSGISVFSRIAEQAARHDAVNLWQGAPSFPADPALIARAERAMRSGLNQYAPMAGYAPLRAVLAEKTE
RLHGARYRPDSEITVTAGASEAIYAAIAALVQAGDEVIFFEPAFEVYEPSIRLQGATPVALGIRLDTLRIDWDEVAAAIT
PRTRMIIVNTPHNPTGALLDAGDLARLAALTRDTDIVILSDEVYEHMVYDGREHLSLARVPELAERSVIALSLGKTYHAT
GWRVGYCLAPAELTTEIRKVHQYVVFSAPAPLQAALAEALAEPHSYLGLAAFYQRKRDLLVESMAGSRLSVVPSAGGFFM
LVRFDRVCAQGDEAFAMAVLEQHGVGTIPLASFYQDRRDTGMLRLSFCKDDDTLREGGRRLAAI

Sequences:

>Translated_384_residues
MRNSCRIETKLPQSGISVFSRIAEQAARHDAVNLWQGAPSFPADPALIARAERAMRSGLNQYAPMAGYAPLRAVLAEKTE
RLHGARYRPDSEITVTAGASEAIYAAIAALVQAGDEVIFFEPAFEVYEPSIRLQGATPVALGIRLDTLRIDWDEVAAAIT
PRTRMIIVNTPHNPTGALLDAGDLARLAALTRDTDIVILSDEVYEHMVYDGREHLSLARVPELAERSVIALSLGKTYHAT
GWRVGYCLAPAELTTEIRKVHQYVVFSAPAPLQAALAEALAEPHSYLGLAAFYQRKRDLLVESMAGSRLSVVPSAGGFFM
LVRFDRVCAQGDEAFAMAVLEQHGVGTIPLASFYQDRRDTGMLRLSFCKDDDTLREGGRRLAAI
>Mature_384_residues
MRNSCRIETKLPQSGISVFSRIAEQAARHDAVNLWQGAPSFPADPALIARAERAMRSGLNQYAPMAGYAPLRAVLAEKTE
RLHGARYRPDSEITVTAGASEAIYAAIAALVQAGDEVIFFEPAFEVYEPSIRLQGATPVALGIRLDTLRIDWDEVAAAIT
PRTRMIIVNTPHNPTGALLDAGDLARLAALTRDTDIVILSDEVYEHMVYDGREHLSLARVPELAERSVIALSLGKTYHAT
GWRVGYCLAPAELTTEIRKVHQYVVFSAPAPLQAALAEALAEPHSYLGLAAFYQRKRDLLVESMAGSRLSVVPSAGGFFM
LVRFDRVCAQGDEAFAMAVLEQHGVGTIPLASFYQDRRDTGMLRLSFCKDDDTLREGGRRLAAI

Specific function: Shows aminotransferase activity with methionine and histidine as substrates, and to a lesser extent also with phenylalanine [H]

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=392, Percent_Identity=34.1836734693878, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI169881279, Length=392, Percent_Identity=34.1836734693878, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI56713254, Length=390, Percent_Identity=30.7692307692308, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI56713256, Length=390, Percent_Identity=30.7692307692308, Blast_Score=188, Evalue=6e-48,
Organism=Homo sapiens, GI169881281, Length=298, Percent_Identity=31.8791946308725, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI4507369, Length=224, Percent_Identity=26.7857142857143, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1786816, Length=383, Percent_Identity=45.1697127937337, Blast_Score=340, Evalue=8e-95,
Organism=Escherichia coli, GI1788722, Length=395, Percent_Identity=24.5569620253165, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1788627, Length=348, Percent_Identity=26.4367816091954, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788332, Length=212, Percent_Identity=28.3018867924528, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787710, Length=222, Percent_Identity=29.7297297297297, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71994472, Length=399, Percent_Identity=30.3258145363409, Blast_Score=201, Evalue=6e-52,
Organism=Caenorhabditis elegans, GI71994476, Length=399, Percent_Identity=30.3258145363409, Blast_Score=200, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI17567369, Length=397, Percent_Identity=28.463476070529, Blast_Score=195, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17567663, Length=371, Percent_Identity=24.5283018867925, Blast_Score=97, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6322401, Length=391, Percent_Identity=30.690537084399, Blast_Score=176, Evalue=7e-45,
Organism=Drosophila melanogaster, GI28573069, Length=409, Percent_Identity=32.0293398533007, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24646114, Length=409, Percent_Identity=32.0293398533007, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI28573067, Length=409, Percent_Identity=32.0293398533007, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI28573065, Length=409, Percent_Identity=32.0293398533007, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI18859735, Length=326, Percent_Identity=24.8466257668712, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.- [C]

Molecular weight: Translated: 41950; Mature: 41950

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNSCRIETKLPQSGISVFSRIAEQAARHDAVNLWQGAPSFPADPALIARAERAMRSGLN
CCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCHH
QYAPMAGYAPLRAVLAEKTERLHGARYRPDSEITVTAGASEAIYAAIAALVQAGDEVIFF
HCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEE
EPAFEVYEPSIRLQGATPVALGIRLDTLRIDWDEVAAAITPRTRMIIVNTPHNPTGALLD
CCCHHHHCCCEEECCCCCEEEEEEEEEEEECHHHHHHHCCCCEEEEEEECCCCCCCCEEC
AGDLARLAALTRDTDIVILSDEVYEHMVYDGREHLSLARVPELAERSVIALSLGKTYHAT
CHHHHHHHHHCCCCCEEEECHHHHHHHHHCCHHHHHHHHCHHHHHCCEEEEEECCEEECC
GWRVGYCLAPAELTTEIRKVHQYVVFSAPAPLQAALAEALAEPHSYLGLAAFYQRKRDLL
CCEEEEEECCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VESMAGSRLSVVPSAGGFFMLVRFDRVCAQGDEAFAMAVLEQHGVGTIPLASFYQDRRDT
HHHHCCCEEEEEECCCCEEEEEEHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCC
GMLRLSFCKDDDTLREGGRRLAAI
CEEEEEEECCCHHHHHCCCEECCC
>Mature Secondary Structure
MRNSCRIETKLPQSGISVFSRIAEQAARHDAVNLWQGAPSFPADPALIARAERAMRSGLN
CCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCHH
QYAPMAGYAPLRAVLAEKTERLHGARYRPDSEITVTAGASEAIYAAIAALVQAGDEVIFF
HCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEE
EPAFEVYEPSIRLQGATPVALGIRLDTLRIDWDEVAAAITPRTRMIIVNTPHNPTGALLD
CCCHHHHCCCEEECCCCCEEEEEEEEEEEECHHHHHHHCCCCEEEEEEECCCCCCCCEEC
AGDLARLAALTRDTDIVILSDEVYEHMVYDGREHLSLARVPELAERSVIALSLGKTYHAT
CHHHHHHHHHCCCCCEEEECHHHHHHHHHCCHHHHHHHHCHHHHHCCEEEEEECCEEECC
GWRVGYCLAPAELTTEIRKVHQYVVFSAPAPLQAALAEALAEPHSYLGLAAFYQRKRDLL
CCEEEEEECCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VESMAGSRLSVVPSAGGFFMLVRFDRVCAQGDEAFAMAVLEQHGVGTIPLASFYQDRRDT
HHHHCCCEEEEEECCCCEEEEEEHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCC
GMLRLSFCKDDDTLREGGRRLAAI
CEEEEEEECCCHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]