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The map label for this gene is rssA [H]

Identifier: 238028548

GI number: 238028548

Start: 3417210

End: 3418568

Strand: Reverse

Name: rssA [H]

Synonym: bglu_1g30120

Alternate gene names: 238028548

Gene position: 3418568-3417210 (Counterclockwise)

Preceding gene: 238028549

Following gene: 238028546

Centisome position: 87.51

GC content: 71.52

Gene sequence:

>1359_bases
ATGAATAGCCTGCGCGTGCGGCTGCTGATCTGGCTGGCGCTGCCGATGACGGTGTTCATCGTCGCGGCCGGCCTGATCAC
GCGCAGCAACGCGTGGCGCACCGCCAACCTGCTGCAGGACGAGGTGCTGCTGTCGGCCGCGCGCGTGATGGCCGGCAATG
TCGGCTGGGACGGCAACGACCTGAGCGCGGCCGTCTCGCCGAGCGCGATCGAGATCCTCAGCACGCCGCGCGAGGACCAG
GTGTTCTTTCGCGTGCAGGAGATCGGCGGGCCGATGATCGCCGGCACGTCGGACTTTCCGCAGGTGGTGCCCGAGGTCTC
GCCGAAGTGGTACGACGCGGTGATGAACGGCGAGCCGGTGCGCGCCGTGTCGGTGATCCGGCCGATGTACGACGCCGGCG
TGACGCGCCGCGTGGTGATCTCGGTGGGGCGCACGCTGCGGCAGCGCGATGCGCTGGTGCACGCGCTGTGGCGCCCGCAG
ATGTTCTATTTCTCCGCGATCCTGACGATCGCCGTGGTGCTGGTCTGCGTCGGGCTCACGCTCGAGCTGCGGCCGCTCGC
GCGGCTCGCGCGGCGCATGCCCGAGCGCGTCCTGACCTCGTCGGTGCGCGTGAAGGTGGAGCCGCTGCGCAGCGAGCTGC
GGCCGATCGTGAGCGCATTCAACCAGTGCCTCGAGATCATCGAGAAACAGACCGCCATGCAGCGGCGCTTCATCGCCGAC
GCCGCGCACCAGCTGCGCACGCCGCTCACGCTGCTCGGCACGCAGCTGCAGTACGCGCGCCGCCAGCACGATCCGGAACA
GGTGCAGGACACGCTGAAGGCGATGGCCCGCAGCAATCGCTCGCTGGTCGCGCTGACCAACCAGCTGCTGACGCTGGCGC
AGGCCGAGGCGGCCGACTACGCGCAATACGCGGGCGTGAAGGTGGACCTGCGCGCGATCGCGACCGGCACCATCGAGCAG
CTCGCGCTGCTCGCCCAGCGGCGCCGCGTGGAGCTGGCCGCCCGGCTCGACGCGCCCGATGCGTTCGTGAACGGCAACGA
GCAACTGCTGGCGGTGCTGGTGTTCAATCTGGTCGACAACGCGATCCGCTATTCGCCCGAGGGCGGTACCGTGACGGTCT
CGCTCGAGGCCGCGCCGGAGGCGGTGCGGCTCGCCGTTGCCGACGAGGGGGCGGGCATCGCCGCCGGGCTGCGCGAGAAG
GTGTTCGAGCCGTTCTTCCGCGCCTCGCCGCTGCCAGGCAGCGGGCTCGGGCTGGCGATCGTGCGCGAGATCGCGCGCGC
GCACCGCGCGACGCTGCGGCTCGACGACGGGCCGGGCGGGCGCGGGCTGCTCGTCACGGCGGCGTTTCCGGCCGGCTGA

Upstream 100 bases:

>100_bases
GAGATCTACGTGTCGCGGCTGCGCCGCAAGCTCGAGGCGAGCAGCGCCACCATCATCACGCTGCGCGGGCTCGGCTATCT
GCTGGAAGACGGCGCCGCCG

Downstream 100 bases:

>100_bases
GCAATCGGGCGGGCCGGCCCGCCGCGCCCCGGCCTCAGGCCTGCACGTGCGCTTCGCCCGGCACCCAGCCCAGTTCGCGC
CGGGCCTTCTGGTTGGATAC

Product: histidine Kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MNSLRVRLLIWLALPMTVFIVAAGLITRSNAWRTANLLQDEVLLSAARVMAGNVGWDGNDLSAAVSPSAIEILSTPREDQ
VFFRVQEIGGPMIAGTSDFPQVVPEVSPKWYDAVMNGEPVRAVSVIRPMYDAGVTRRVVISVGRTLRQRDALVHALWRPQ
MFYFSAILTIAVVLVCVGLTLELRPLARLARRMPERVLTSSVRVKVEPLRSELRPIVSAFNQCLEIIEKQTAMQRRFIAD
AAHQLRTPLTLLGTQLQYARRQHDPEQVQDTLKAMARSNRSLVALTNQLLTLAQAEAADYAQYAGVKVDLRAIATGTIEQ
LALLAQRRRVELAARLDAPDAFVNGNEQLLAVLVFNLVDNAIRYSPEGGTVTVSLEAAPEAVRLAVADEGAGIAAGLREK
VFEPFFRASPLPGSGLGLAIVREIARAHRATLRLDDGPGGRGLLVTAAFPAG

Sequences:

>Translated_452_residues
MNSLRVRLLIWLALPMTVFIVAAGLITRSNAWRTANLLQDEVLLSAARVMAGNVGWDGNDLSAAVSPSAIEILSTPREDQ
VFFRVQEIGGPMIAGTSDFPQVVPEVSPKWYDAVMNGEPVRAVSVIRPMYDAGVTRRVVISVGRTLRQRDALVHALWRPQ
MFYFSAILTIAVVLVCVGLTLELRPLARLARRMPERVLTSSVRVKVEPLRSELRPIVSAFNQCLEIIEKQTAMQRRFIAD
AAHQLRTPLTLLGTQLQYARRQHDPEQVQDTLKAMARSNRSLVALTNQLLTLAQAEAADYAQYAGVKVDLRAIATGTIEQ
LALLAQRRRVELAARLDAPDAFVNGNEQLLAVLVFNLVDNAIRYSPEGGTVTVSLEAAPEAVRLAVADEGAGIAAGLREK
VFEPFFRASPLPGSGLGLAIVREIARAHRATLRLDDGPGGRGLLVTAAFPAG
>Mature_452_residues
MNSLRVRLLIWLALPMTVFIVAAGLITRSNAWRTANLLQDEVLLSAARVMAGNVGWDGNDLSAAVSPSAIEILSTPREDQ
VFFRVQEIGGPMIAGTSDFPQVVPEVSPKWYDAVMNGEPVRAVSVIRPMYDAGVTRRVVISVGRTLRQRDALVHALWRPQ
MFYFSAILTIAVVLVCVGLTLELRPLARLARRMPERVLTSSVRVKVEPLRSELRPIVSAFNQCLEIIEKQTAMQRRFIAD
AAHQLRTPLTLLGTQLQYARRQHDPEQVQDTLKAMARSNRSLVALTNQLLTLAQAEAADYAQYAGVKVDLRAIATGTIEQ
LALLAQRRRVELAARLDAPDAFVNGNEQLLAVLVFNLVDNAIRYSPEGGTVTVSLEAAPEAVRLAVADEGAGIAAGLREK
VFEPFFRASPLPGSGLGLAIVREIARAHRATLRLDDGPGGRGLLVTAAFPAG

Specific function: Member of the two-component regulatory system rssA/rssB involved in regulation of swarming motility which has been shown to be inhibited by saturated fatty acids. RssA/rssB regulates cellular fatty acid composition, hemolysin production and cell surface t

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=450, Percent_Identity=28.6666666666667, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1786783, Length=330, Percent_Identity=27.8787878787879, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1790551, Length=255, Percent_Identity=31.3725490196078, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1788393, Length=252, Percent_Identity=31.7460317460317, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1786600, Length=244, Percent_Identity=31.1475409836066, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI1790346, Length=240, Percent_Identity=27.5, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1788549, Length=204, Percent_Identity=26.4705882352941, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1787894, Length=237, Percent_Identity=30.8016877637131, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790861, Length=272, Percent_Identity=28.3088235294118, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788713, Length=238, Percent_Identity=23.109243697479, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI145693157, Length=219, Percent_Identity=25.1141552511416, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1790436, Length=215, Percent_Identity=26.9767441860465, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87082128, Length=323, Percent_Identity=27.5541795665635, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787374, Length=290, Percent_Identity=25.8620689655172, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788279, Length=279, Percent_Identity=26.8817204301075, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789808, Length=296, Percent_Identity=28.0405405405405, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789149, Length=205, Percent_Identity=26.3414634146341, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI87081816, Length=228, Percent_Identity=28.0701754385965, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1786912, Length=236, Percent_Identity=23.3050847457627, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 49283; Mature: 49283

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLRVRLLIWLALPMTVFIVAAGLITRSNAWRTANLLQDEVLLSAARVMAGNVGWDGND
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LSAAVSPSAIEILSTPREDQVFFRVQEIGGPMIAGTSDFPQVVPEVSPKWYDAVMNGEPV
CCCCCCCHHHHHHCCCCCCHHEEEHHHHCCCEEECCCCHHHHHHCCCCHHHHHHCCCCCH
RAVSVIRPMYDAGVTRRVVISVGRTLRQRDALVHALWRPQMFYFSAILTIAVVLVCVGLT
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
LELRPLARLARRMPERVLTSSVRVKVEPLRSELRPIVSAFNQCLEIIEKQTAMQRRFIAD
CCHHHHHHHHHHCHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAHQLRTPLTLLGTQLQYARRQHDPEQVQDTLKAMARSNRSLVALTNQLLTLAQAEAADY
HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
AQYAGVKVDLRAIATGTIEQLALLAQRRRVELAARLDAPDAFVNGNEQLLAVLVFNLVDN
HHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHH
AIRYSPEGGTVTVSLEAAPEAVRLAVADEGAGIAAGLREKVFEPFFRASPLPGSGLGLAI
HHEECCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
VREIARAHRATLRLDDGPGGRGLLVTAAFPAG
HHHHHHHHHHEEEECCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MNSLRVRLLIWLALPMTVFIVAAGLITRSNAWRTANLLQDEVLLSAARVMAGNVGWDGND
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LSAAVSPSAIEILSTPREDQVFFRVQEIGGPMIAGTSDFPQVVPEVSPKWYDAVMNGEPV
CCCCCCCHHHHHHCCCCCCHHEEEHHHHCCCEEECCCCHHHHHHCCCCHHHHHHCCCCCH
RAVSVIRPMYDAGVTRRVVISVGRTLRQRDALVHALWRPQMFYFSAILTIAVVLVCVGLT
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
LELRPLARLARRMPERVLTSSVRVKVEPLRSELRPIVSAFNQCLEIIEKQTAMQRRFIAD
CCHHHHHHHHHHCHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAHQLRTPLTLLGTQLQYARRQHDPEQVQDTLKAMARSNRSLVALTNQLLTLAQAEAADY
HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
AQYAGVKVDLRAIATGTIEQLALLAQRRRVELAARLDAPDAFVNGNEQLLAVLVFNLVDN
HHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHH
AIRYSPEGGTVTVSLEAAPEAVRLAVADEGAGIAAGLREKVFEPFFRASPLPGSGLGLAI
HHEECCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
VREIARAHRATLRLDDGPGGRGLLVTAAFPAG
HHHHHHHHHHEEEECCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA