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The map label for this gene is yfgC [C]

Identifier: 238028522

GI number: 238028522

Start: 3379527

End: 3381212

Strand: Reverse

Name: yfgC [C]

Synonym: bglu_1g29860

Alternate gene names: 238028522

Gene position: 3381212-3379527 (Counterclockwise)

Preceding gene: 238028524

Following gene: 238028516

Centisome position: 86.55

GC content: 74.67

Gene sequence:

>1686_bases
ATGCGTCCGAAATCCCTGCTCGCCGTCTCGCTGTCGCTCGCCCTCGCGCTGCCGCCGGGCAGCCGCGCGCAGTCGTCGCC
CACGCCGCCGCTGCCGCGCGTTCTCGACGCCATTTCCACGGCCCCCGAGATTCCGCCCGAGATCGCGCCGGGCGTGTTCG
GCACCTACGGCGGCGAGCATGCCCGGCTCGCGGGCACGCCCGGCGCGGCGGCGCCGAGCCTGCGCGGGCCGCTGCACAAC
CCGCAGCTGCCCGACCTCGGCGACGGCTCGGGCGGCGCGCTGACGCCGCAGGCCGAGCGCCGTCTCGGCGAGCGCGTGAT
GCGCGAGATCCGGCGCGACCCCGACTATCTCGACGACTGGCTCGCGCGCGACTACCTCAACGCGGTCGCGGCGAAACTGT
CGGCGGCGGCGGCCGCGCAGTTCATCGGCGGCGATCGTCCCGATTTCGACCTGTTCCCGATGCGCGATGCGCAGATCAAC
GCCTTCTCGCTGCCGGGCGGCTTCATCGGCGTGAACACCGGCCTCGTGATCGTGACGCGCACCGAGTCCGAGCTGGCCTC
GGTGCTCGGCCACGAAATGGGCCACGTGCTGCAGCGGCACATCGCGCGCATGCTCGGCGCGAGCGAGAAGACGGGCTACG
CGGCGCTCGCGGCGATGCTGCTCGGGGTGCTGGCCGGCGTGCTCGCGCGCAGCGGCGATCTGGGCAGCGCGATCGCGGTG
GGCGGCCAGGCCTACGCGGTTGACAACCAGCTGCGCTTCTCGCGCGGCGCCGAGCGCGAGGCGGATCGCGTGGGCTTCCA
ACTGCTCGCGGGCGCCGGCTTCGATCCGTATGGCATGCCCGGCTTCTTCGAGCGCCTGGAGCGCGCGTCGATGGGCGACG
CGGGCGTGCCCGAATACGCGCGCACCCATCCGCTCACCATCGACCGGATCGCCGACATGGAGGCACGCGCGCGCCGCGCG
CCGTACCGCCAGCCGCGCCAGTCGAGCGAATACGGCTTCGTGCGCGCACGGCTGCGGGTGCTGCAGCTGCGCGCGCCGTC
CGACATCGCCGACGAGGTGCGGCGCATGCGCGGCGAGATCGACGACCGGCTCGCGCCGAACGTGGCGGCCAACTGGTACG
GCATCGCGCTCGGCGAGATGCTGCTCGGCCGCTATCCGGAGGCGGATGCGGCGCTCGCGGCCGCGCGCGGGCGTTTCGAA
CGGTTCGAGGCCGACCAGGGCGCGCTCCCCGCCAGCTCGCCGAGCCTCGACGTGCTGGCGGCCGACATCGCGCGCCGCGC
CGGCCGCGCCGCCGACGCGGTGCGGCTCGCGGCGGCGGCGCAGCAGCGCTGGCTGGCCTCGCACGCGGCGATCGCGATGC
ATCTGGAGGCGCTGCTCGCGGCGAAGCGCTTCGGCCAGGCGCAGGCGCTCGCGCAGGAGCAGGCCCAGGCGGACCCGCGC
CAGCCCGACTGGTGGCGCTATCTCGCGCAGGCGGCGCAGGGCAGCGGCGATGCGATCATGCGGCGCCGCGCGCTGGCCGA
GCAGCTCGCGCTCGGCGGCGCGTGGCCGTCGGCGATCCGTCAGCTGCAGGAGGCGCGTGACGACAAGTCGGTCAGCTTCT
ACGAGCAGTCGATCATCACCGCGCGGCTGCACGACTTCGAGGCGCGCTACCAGGAGGAGCAGGCCGACCGGGACGAGCGC
GGCTAG

Upstream 100 bases:

>100_bases
TGAGCGCGATTCGCCCGGCGTGGATTCCGGGGCGCGCCGCGCGCCGCCGTCGAATCGCGTCGCGGGCCGCCCGTCGCCTC
CGCCGCGTTCGATGTCATCC

Downstream 100 bases:

>100_bases
GGCCAGGGCCGGCCTGCGGCGGCGCGGCGTCAGCCGCCGGCCGTGCCCGCCGCGCCGGCGCCGCCCGCCCGCGCCGCCGG
GCTGGCGACGAACGCGAAGC

Product: M48 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MRPKSLLAVSLSLALALPPGSRAQSSPTPPLPRVLDAISTAPEIPPEIAPGVFGTYGGEHARLAGTPGAAAPSLRGPLHN
PQLPDLGDGSGGALTPQAERRLGERVMREIRRDPDYLDDWLARDYLNAVAAKLSAAAAAQFIGGDRPDFDLFPMRDAQIN
AFSLPGGFIGVNTGLVIVTRTESELASVLGHEMGHVLQRHIARMLGASEKTGYAALAAMLLGVLAGVLARSGDLGSAIAV
GGQAYAVDNQLRFSRGAEREADRVGFQLLAGAGFDPYGMPGFFERLERASMGDAGVPEYARTHPLTIDRIADMEARARRA
PYRQPRQSSEYGFVRARLRVLQLRAPSDIADEVRRMRGEIDDRLAPNVAANWYGIALGEMLLGRYPEADAALAAARGRFE
RFEADQGALPASSPSLDVLAADIARRAGRAADAVRLAAAAQQRWLASHAAIAMHLEALLAAKRFGQAQALAQEQAQADPR
QPDWWRYLAQAAQGSGDAIMRRRALAEQLALGGAWPSAIRQLQEARDDKSVSFYEQSIITARLHDFEARYQEEQADRDER
G

Sequences:

>Translated_561_residues
MRPKSLLAVSLSLALALPPGSRAQSSPTPPLPRVLDAISTAPEIPPEIAPGVFGTYGGEHARLAGTPGAAAPSLRGPLHN
PQLPDLGDGSGGALTPQAERRLGERVMREIRRDPDYLDDWLARDYLNAVAAKLSAAAAAQFIGGDRPDFDLFPMRDAQIN
AFSLPGGFIGVNTGLVIVTRTESELASVLGHEMGHVLQRHIARMLGASEKTGYAALAAMLLGVLAGVLARSGDLGSAIAV
GGQAYAVDNQLRFSRGAEREADRVGFQLLAGAGFDPYGMPGFFERLERASMGDAGVPEYARTHPLTIDRIADMEARARRA
PYRQPRQSSEYGFVRARLRVLQLRAPSDIADEVRRMRGEIDDRLAPNVAANWYGIALGEMLLGRYPEADAALAAARGRFE
RFEADQGALPASSPSLDVLAADIARRAGRAADAVRLAAAAQQRWLASHAAIAMHLEALLAAKRFGQAQALAQEQAQADPR
QPDWWRYLAQAAQGSGDAIMRRRALAEQLALGGAWPSAIRQLQEARDDKSVSFYEQSIITARLHDFEARYQEEQADRDER
G
>Mature_561_residues
MRPKSLLAVSLSLALALPPGSRAQSSPTPPLPRVLDAISTAPEIPPEIAPGVFGTYGGEHARLAGTPGAAAPSLRGPLHN
PQLPDLGDGSGGALTPQAERRLGERVMREIRRDPDYLDDWLARDYLNAVAAKLSAAAAAQFIGGDRPDFDLFPMRDAQIN
AFSLPGGFIGVNTGLVIVTRTESELASVLGHEMGHVLQRHIARMLGASEKTGYAALAAMLLGVLAGVLARSGDLGSAIAV
GGQAYAVDNQLRFSRGAEREADRVGFQLLAGAGFDPYGMPGFFERLERASMGDAGVPEYARTHPLTIDRIADMEARARRA
PYRQPRQSSEYGFVRARLRVLQLRAPSDIADEVRRMRGEIDDRLAPNVAANWYGIALGEMLLGRYPEADAALAAARGRFE
RFEADQGALPASSPSLDVLAADIARRAGRAADAVRLAAAAQQRWLASHAAIAMHLEALLAAKRFGQAQALAQEQAQADPR
QPDWWRYLAQAAQGSGDAIMRRRALAEQLALGGAWPSAIRQLQEARDDKSVSFYEQSIITARLHDFEARYQEEQADRDER
G

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=325, Percent_Identity=31.6923076923077, Blast_Score=133, Evalue=4e-32,
Organism=Escherichia coli, GI87082185, Length=156, Percent_Identity=32.0512820512821, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 60423; Mature: 60423

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPKSLLAVSLSLALALPPGSRAQSSPTPPLPRVLDAISTAPEIPPEIAPGVFGTYGGEH
CCCHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCC
ARLAGTPGAAAPSLRGPLHNPQLPDLGDGSGGALTPQAERRLGERVMREIRRDPDYLDDW
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
LARDYLNAVAAKLSAAAAAQFIGGDRPDFDLFPMRDAQINAFSLPGGFIGVNTGLVIVTR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCEEEEEC
TESELASVLGHEMGHVLQRHIARMLGASEKTGYAALAAMLLGVLAGVLARSGDLGSAIAV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHEE
GGQAYAVDNQLRFSRGAEREADRVGFQLLAGAGFDPYGMPGFFERLERASMGDAGVPEYA
CCEEEEECCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHH
RTHPLTIDRIADMEARARRAPYRQPRQSSEYGFVRARLRVLQLRAPSDIADEVRRMRGEI
HCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
DDRLAPNVAANWYGIALGEMLLGRYPEADAALAAARGRFERFEADQGALPASSPSLDVLA
HHHCCCCHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
ADIARRAGRAADAVRLAAAAQQRWLASHAAIAMHLEALLAAKRFGQAQALAQEQAQADPR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QPDWWRYLAQAAQGSGDAIMRRRALAEQLALGGAWPSAIRQLQEARDDKSVSFYEQSIIT
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
ARLHDFEARYQEEQADRDERG
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRPKSLLAVSLSLALALPPGSRAQSSPTPPLPRVLDAISTAPEIPPEIAPGVFGTYGGEH
CCCHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCC
ARLAGTPGAAAPSLRGPLHNPQLPDLGDGSGGALTPQAERRLGERVMREIRRDPDYLDDW
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
LARDYLNAVAAKLSAAAAAQFIGGDRPDFDLFPMRDAQINAFSLPGGFIGVNTGLVIVTR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCEEEEEC
TESELASVLGHEMGHVLQRHIARMLGASEKTGYAALAAMLLGVLAGVLARSGDLGSAIAV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHEE
GGQAYAVDNQLRFSRGAEREADRVGFQLLAGAGFDPYGMPGFFERLERASMGDAGVPEYA
CCEEEEECCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHH
RTHPLTIDRIADMEARARRAPYRQPRQSSEYGFVRARLRVLQLRAPSDIADEVRRMRGEI
HCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
DDRLAPNVAANWYGIALGEMLLGRYPEADAALAAARGRFERFEADQGALPASSPSLDVLA
HHHCCCCHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
ADIARRAGRAADAVRLAAAAQQRWLASHAAIAMHLEALLAAKRFGQAQALAQEQAQADPR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QPDWWRYLAQAAQGSGDAIMRRRALAEQLALGGAWPSAIRQLQEARDDKSVSFYEQSIIT
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
ARLHDFEARYQEEQADRDERG
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]