| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028516
Identifier: 238028516
GI number: 238028516
Start: 3374832
End: 3375626
Strand: Reverse
Name: 238028516
Synonym: bglu_1g29800
Alternate gene names: NA
Gene position: 3375626-3374832 (Counterclockwise)
Preceding gene: 238028522
Following gene: 238028515
Centisome position: 86.41
GC content: 71.19
Gene sequence:
>795_bases ATGCTCGCTCGCCTGTCCCCCACCGATCGCCACGCCTGCCTGCAGGCGGCGCGCGACTATGCGCCGACGCTGACGGCGAT ACTGTCGTGGGGATTCGTTACCGGGATCGCGATGAGCCAGTCGGTGATGACGACCGGGCAGGCGGTCTGGATGTCGCTGC TCGTCTACGGCGGCTCGTCCCAGCTCGCGGTGCTGCCGCTGATGGCGGCCAAATTGCCGCTCTGGACCCTCCTGCTAACG GCCGCGATGGTCAACCTGCGCTTCGTGATCTTCAGCGCCGGCCTCGCGCCGCACTTCTGCTACCTGCCGATGTGGCGCCG CATCCTGATCGGCTATTTCAACGGCGACGTCATCTACCTGATATTCGTCAAGCAGGGTTTCGCGACCGGCCGCGTGCCGG GCAAGGAAGCCTACTTCTGGGGCATGGCGCTGCTCAGCTGGGTGTCGTGGCAGGCTTCGTCGCTGGCCGGCATCGCGCTG GCGAGCGTGGTGCCGGCCAGCTGGGGGCTGGGTCTGGCCGGCACGCTCGCGCTGCTGCCGATCATGGTGTCGGCGGTGGC GAACCGCTCCACGCTCGCGGCGGTGGCGGTGGCCGGCGTGGTCGCGCTGCTGGCGCTCGACCTGCCTTACCGGCTCGGGC TGCCGCTCGCGGTGTTCGCCGCGCTCGCGGCCGGCACGCTGGCCGACACCTTCGTCGAGCGCGCCGACTGGCGCCGGCTG CGTGCCCGGGTGCGCAGCCGCGACGCGGTCGATCCGGCCGCGGCCGCGAGCGACGGCGAAGGAGGCCGGCGGTGA
Upstream 100 bases:
>100_bases CGGCGCTATAATCCTGCGGTCGTTCCACAAAAGCACCACGGCAGACAACGCGGTCCGCGCGCCAGCCCGCCCCCATTGCG CCGCCGCCCGGCGCCGTTCC
Downstream 100 bases:
>100_bases GCGGCGCGCAGGTCTGGTGGCTGATCGCGGGCATGACGCTGGTCACCGCGCTCACCCGCGCGCTGTTCCTGATCGGCGGC GCGCGCACCGTCCTGCCCGC
Product: AzlC family protein
Products: NA
Alternate protein names: Branched-Chain Amino Acid Permease; Branched-Chain Amino Acid Transport Protein AzlC; AzlC-Like; Inner Membrane Protein; AzlC-Like Protein; Inner Membrane Protein YgaZ; Branched Chain Amino Acid Efflux Pump LivE; AzlC Family; AzlC Protein; Azlc Family Protein; Branched Chain Amino Acid ABC Transporter
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MLARLSPTDRHACLQAARDYAPTLTAILSWGFVTGIAMSQSVMTTGQAVWMSLLVYGGSSQLAVLPLMAAKLPLWTLLLT AAMVNLRFVIFSAGLAPHFCYLPMWRRILIGYFNGDVIYLIFVKQGFATGRVPGKEAYFWGMALLSWVSWQASSLAGIAL ASVVPASWGLGLAGTLALLPIMVSAVANRSTLAAVAVAGVVALLALDLPYRLGLPLAVFAALAAGTLADTFVERADWRRL RARVRSRDAVDPAAAASDGEGGRR
Sequences:
>Translated_264_residues MLARLSPTDRHACLQAARDYAPTLTAILSWGFVTGIAMSQSVMTTGQAVWMSLLVYGGSSQLAVLPLMAAKLPLWTLLLT AAMVNLRFVIFSAGLAPHFCYLPMWRRILIGYFNGDVIYLIFVKQGFATGRVPGKEAYFWGMALLSWVSWQASSLAGIAL ASVVPASWGLGLAGTLALLPIMVSAVANRSTLAAVAVAGVVALLALDLPYRLGLPLAVFAALAAGTLADTFVERADWRRL RARVRSRDAVDPAAAASDGEGGRR >Mature_264_residues MLARLSPTDRHACLQAARDYAPTLTAILSWGFVTGIAMSQSVMTTGQAVWMSLLVYGGSSQLAVLPLMAAKLPLWTLLLT AAMVNLRFVIFSAGLAPHFCYLPMWRRILIGYFNGDVIYLIFVKQGFATGRVPGKEAYFWGMALLSWVSWQASSLAGIAL ASVVPASWGLGLAGTLALLPIMVSAVANRSTLAAVAVAGVVALLALDLPYRLGLPLAVFAALAAGTLADTFVERADWRRL RARVRSRDAVDPAAAASDGEGGRR
Specific function: Unknown
COG id: COG1296
COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28096; Mature: 28096
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARLSPTDRHACLQAARDYAPTLTAILSWGFVTGIAMSQSVMTTGQAVWMSLLVYGGSS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QLAVLPLMAAKLPLWTLLLTAAMVNLRFVIFSAGLAPHFCYLPMWRRILIGYFNGDVIYL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEE IFVKQGFATGRVPGKEAYFWGMALLSWVSWQASSLAGIALASVVPASWGLGLAGTLALLP EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IMVSAVANRSTLAAVAVAGVVALLALDLPYRLGLPLAVFAALAAGTLADTFVERADWRRL HHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RARVRSRDAVDPAAAASDGEGGRR HHHHHHCCCCCCHHCCCCCCCCCC >Mature Secondary Structure MLARLSPTDRHACLQAARDYAPTLTAILSWGFVTGIAMSQSVMTTGQAVWMSLLVYGGSS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QLAVLPLMAAKLPLWTLLLTAAMVNLRFVIFSAGLAPHFCYLPMWRRILIGYFNGDVIYL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEE IFVKQGFATGRVPGKEAYFWGMALLSWVSWQASSLAGIALASVVPASWGLGLAGTLALLP EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IMVSAVANRSTLAAVAVAGVVALLALDLPYRLGLPLAVFAALAAGTLADTFVERADWRRL HHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RARVRSRDAVDPAAAASDGEGGRR HHHHHHCCCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA