| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is cbbA [H]
Identifier: 238028512
GI number: 238028512
Start: 3370058
End: 3371122
Strand: Reverse
Name: cbbA [H]
Synonym: bglu_1g29760
Alternate gene names: 238028512
Gene position: 3371122-3370058 (Counterclockwise)
Preceding gene: 238028513
Following gene: 238028511
Centisome position: 86.3
GC content: 65.63
Gene sequence:
>1065_bases ATGCCTCTCGTATCAATGCGTCAACTGCTGGATCACGCGGCAGAGCATGGCTATGGCCTGCCGGCATTCAACGTGAACAA CCTGGAGCAGGTGCAGGCGATCATGGCGGCGGCCGACCAGGTCGGCGCGCCGGTGATCATGCAGGCGTCGGCCGGCGCCC GGAAGTACGCAGGCGAGGCGTTCCTGCGCCATCTGATCGAATCGGCGGTCGAGTCGTATCCGCACATTCCGGTCGTGATG CACCAGGATCACGGCCAGTCGCCGGCGGTCTGCCTCGCGGCGATCCGCAGCGGCTTCTCGAGCGTGATGATGGACGGCTC GCTGGAGGCCGACGGCAAGTCGGTGGCGTCGTATGAATACAACGTCGACGTGTCGCGCAAGGTCGTCGAGATGGCCCACG CGATCGGCGTGACGGTGGAGGCCGAACTCGGCGTGCTCGGTTCGCTCGAGACCATGAAGGGCGACAAGGAAGACGGCCAC GGCGCCGACGGCACCATGACGCGCGAGCAGCTGCTGACGGACCCCGAGCAGGCCGCCGACTTCGTCAGGGAGACGCAGTG CGACGCGCTGGCGATCGCGATCGGCACCTCGCATGGCGCCTACAAGTTCTCGAAGAAGCCCACCGGCGATATCCTCTCGA TCGAGCGGATCAAGGAGATCCACGCGCGCATCCCGAACACGCACCTCGTGATGCACGGTTCGTCGTCGGTGCCGCAGGAA CTGCTGGCCGAGATCCGCGAGTTCGGCGGCGACATGAAGGAAACCTACGGCGTGCCGGTCGAGGAAATCCAGGAAGGCAT CAAGCACGGCGTGCGCAAGATCAACATCGATACCGACCTGCGTCTGGCGATCACGGGCGCGATCCGTCGCTACCTGTTCG AGAACCCGTCGAAGTTCGATCCGCGCGACTATCTGAAGCCGGCCCGCGAGGCCGCCAAGCAGGTCTGCGTGGCGCGCTAC CTCGCGTTCGGCTGCGAAGGCCAGGCCGCGAAGATCAAGCCGGTGCCGCTCGACAAGATGGCCGAGCGCTACAAGGCGGG CGAACTGGCCCAGCTCGTGCGCTAA
Upstream 100 bases:
>100_bases TCGACGCTCGGCCGCGCCGCGCCCGCCCCGTGTTCTCGTCCGGAGCCGGCATGTCGCCGCCGCCCAAAGCGCACCGGTTT TCATTAGACGGAGTACCACA
Downstream 100 bases:
>100_bases CATAGCTGCCGCGGCCGCCCGGTGCGCCGGGCGGCTGTCGGCCGGAGGCCTCGCCGCCGTTCCCGCCTGTCGAAGGGGAA CGGCGTTTCCCTTTTGTTTG
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MPLVSMRQLLDHAAEHGYGLPAFNVNNLEQVQAIMAAADQVGAPVIMQASAGARKYAGEAFLRHLIESAVESYPHIPVVM HQDHGQSPAVCLAAIRSGFSSVMMDGSLEADGKSVASYEYNVDVSRKVVEMAHAIGVTVEAELGVLGSLETMKGDKEDGH GADGTMTREQLLTDPEQAADFVRETQCDALAIAIGTSHGAYKFSKKPTGDILSIERIKEIHARIPNTHLVMHGSSSVPQE LLAEIREFGGDMKETYGVPVEEIQEGIKHGVRKINIDTDLRLAITGAIRRYLFENPSKFDPRDYLKPAREAAKQVCVARY LAFGCEGQAAKIKPVPLDKMAERYKAGELAQLVR
Sequences:
>Translated_354_residues MPLVSMRQLLDHAAEHGYGLPAFNVNNLEQVQAIMAAADQVGAPVIMQASAGARKYAGEAFLRHLIESAVESYPHIPVVM HQDHGQSPAVCLAAIRSGFSSVMMDGSLEADGKSVASYEYNVDVSRKVVEMAHAIGVTVEAELGVLGSLETMKGDKEDGH GADGTMTREQLLTDPEQAADFVRETQCDALAIAIGTSHGAYKFSKKPTGDILSIERIKEIHARIPNTHLVMHGSSSVPQE LLAEIREFGGDMKETYGVPVEEIQEGIKHGVRKINIDTDLRLAITGAIRRYLFENPSKFDPRDYLKPAREAAKQVCVARY LAFGCEGQAAKIKPVPLDKMAERYKAGELAQLVR >Mature_353_residues PLVSMRQLLDHAAEHGYGLPAFNVNNLEQVQAIMAAADQVGAPVIMQASAGARKYAGEAFLRHLIESAVESYPHIPVVMH QDHGQSPAVCLAAIRSGFSSVMMDGSLEADGKSVASYEYNVDVSRKVVEMAHAIGVTVEAELGVLGSLETMKGDKEDGHG ADGTMTREQLLTDPEQAADFVRETQCDALAIAIGTSHGAYKFSKKPTGDILSIERIKEIHARIPNTHLVMHGSSSVPQEL LAEIREFGGDMKETYGVPVEEIQEGIKHGVRKINIDTDLRLAITGAIRRYLFENPSKFDPRDYLKPAREAAKQVCVARYL AFGCEGQAAKIKPVPLDKMAERYKAGELAQLVR
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI87082041, Length=329, Percent_Identity=34.9544072948328, Blast_Score=174, Evalue=5e-45, Organism=Escherichia coli, GI1789526, Length=316, Percent_Identity=32.9113924050633, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI1788072, Length=328, Percent_Identity=28.9634146341463, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI1789293, Length=358, Percent_Identity=24.3016759776536, Blast_Score=80, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6322790, Length=364, Percent_Identity=26.9230769230769, Blast_Score=82, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006412 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38520; Mature: 38389
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVSMRQLLDHAAEHGYGLPAFNVNNLEQVQAIMAAADQVGAPVIMQASAGARKYAGEA CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH FLRHLIESAVESYPHIPVVMHQDHGQSPAVCLAAIRSGFSSVMMDGSLEADGKSVASYEY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE NVDVSRKVVEMAHAIGVTVEAELGVLGSLETMKGDKEDGHGADGTMTREQLLTDPEQAAD CCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHH FVRETQCDALAIAIGTSHGAYKFSKKPTGDILSIERIKEIHARIPNTHLVMHGSSSVPQE HHHHHCCCEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH LLAEIREFGGDMKETYGVPVEEIQEGIKHGVRKINIDTDLRLAITGAIRRYLFENPSKFD HHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCCCCC PRDYLKPAREAAKQVCVARYLAFGCEGQAAKIKPVPLDKMAERYKAGELAQLVR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHC >Mature Secondary Structure PLVSMRQLLDHAAEHGYGLPAFNVNNLEQVQAIMAAADQVGAPVIMQASAGARKYAGEA CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH FLRHLIESAVESYPHIPVVMHQDHGQSPAVCLAAIRSGFSSVMMDGSLEADGKSVASYEY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE NVDVSRKVVEMAHAIGVTVEAELGVLGSLETMKGDKEDGHGADGTMTREQLLTDPEQAAD CCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHH FVRETQCDALAIAIGTSHGAYKFSKKPTGDILSIERIKEIHARIPNTHLVMHGSSSVPQE HHHHHCCCEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH LLAEIREFGGDMKETYGVPVEEIQEGIKHGVRKINIDTDLRLAITGAIRRYLFENPSKFD HHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCCCCC PRDYLKPAREAAKQVCVARYLAFGCEGQAAKIKPVPLDKMAERYKAGELAQLVR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8550527 [H]