| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028507
Identifier: 238028507
GI number: 238028507
Start: 3364867
End: 3366009
Strand: Direct
Name: 238028507
Synonym: bglu_1g29710
Alternate gene names: NA
Gene position: 3364867-3366009 (Clockwise)
Preceding gene: 238028506
Following gene: 238028517
Centisome position: 86.13
GC content: 71.04
Gene sequence:
>1143_bases ATGAAGCCGACCCCCACCGCCACGCCCCGCCAGCCGGGCCGCCTGAAGCGCACGGCGCAGCTGGCAATCGCGAGTGCCGT GTTTGCGCTGCTCGCCGCCTGCGGCGGCGGTGACGACAACGCCGCGCCCACCCAGACGGCCAGCGTGAAGATGCAGGTCG TGTCGTTCGGCGACAGCCTGTCCGACGTCGGCACCTACTCGCCGCAGATCCTGCTCGGATTCGGCGGCGGGCGCTTCACC ACCAATCCGGGCGAAGTCTGGACCCAGAAGGTGGCCGAGTTCTACGGCGACACGCTCAAGCCGGCCTATGAAGGCGGGTT CGGCGTGCCGCTGCAGGCCACGGGCGGCCTCGGCTACGCGCAGGGCGGCTCGCGCGTGACGCAGCAGCCCGGCATCGGCC ACGCCGACGCGTCGGTGGCGAACGCCGATTACGCGCAGGCCACCACCACGCCGATCTCGACCCAGGTCCAGCAGTACCTG CAGCAGTACGGCAGCTTCAACGCGAACCAGATCGTGCTCGTCAACGGCGGCGCCAACGACATCCTGCTGCAGGCGCAGAT CGCGCAGGCGGCGGGCGGCACGCCGGCCGCGCAGCTCGCGGCGGCCCAGGCGGTGGGCCTCGCCGCGCAGCAGCTGGGCG GGATCATCGCGAAGATCGCCGCCTCGGGCGCGACCCACGTGTTCGTATCGAACATGCCCGACATCGGCACCACGCCGCTC GCGGTGGCGGGCGGCGCGGCCACGGCGGCCGCGCTCACGCAGCTCTCGGGCCTCTTCAACAAGACGCTGGCGGGCACGCT GACGGCGCTGAACGTCGACACCACGAAGGTCAAGCTGATGGACACCTTCACGTGGCAGGACGGCATCGGCGCGAACTTGG CGGCCAACGGCTTCTCGGTCGGCAACACCGGCACCGCCTGCAACCTCACCGCGATGGCCACCGCCGCCGCGAAGGCCGGC GTGGCGCAGGCGAGCGCGTTCGCCTCGTCGTTGTTCTGCTCGCCGCAGACCTACACGGCCCCCAACGCCGACCAGACCTA CATGTTCGCCGACTCGGTCCATCCGAGCACGCGCCTGCATGCGCTGTTCGCGCAGTTCGTCGAGCAGCAGATCACGGCCT CCGGCGTGGGGGCGCCGAAGTAA
Upstream 100 bases:
>100_bases AGACGGCACGCCGCCGTGCCGCCGGACATCGGGCCTCACGCGTCCGACGACGCGTAACACCAAGCAGTCTGGCCATATAT CTATACGAGGAGATGAACGC
Downstream 100 bases:
>100_bases GCAGCGAAATCGGCGCCGCCGGGCGCCGCAGACGACAACGCCCGGCGCTTGCGCCGGGCGTTGTTTCATGGACCGCCGGA GCGCCCGGCGGCCCGCTCGC
Product: esterase EstA
Products: NA
Alternate protein names: GDSL Family Lipase; Phospholipase/Lecithinase/Hemolysin-Like Protein; Lipase / Esterase Protein; Lipase/Esterase; Lipase / Esterase; Esterase; Phospholipase/Lecithinase/Hemolysin-Like; Outer Membrane Autotransporter Barrel
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MKPTPTATPRQPGRLKRTAQLAIASAVFALLAACGGGDDNAAPTQTASVKMQVVSFGDSLSDVGTYSPQILLGFGGGRFT TNPGEVWTQKVAEFYGDTLKPAYEGGFGVPLQATGGLGYAQGGSRVTQQPGIGHADASVANADYAQATTTPISTQVQQYL QQYGSFNANQIVLVNGGANDILLQAQIAQAAGGTPAAQLAAAQAVGLAAQQLGGIIAKIAASGATHVFVSNMPDIGTTPL AVAGGAATAAALTQLSGLFNKTLAGTLTALNVDTTKVKLMDTFTWQDGIGANLAANGFSVGNTGTACNLTAMATAAAKAG VAQASAFASSLFCSPQTYTAPNADQTYMFADSVHPSTRLHALFAQFVEQQITASGVGAPK
Sequences:
>Translated_380_residues MKPTPTATPRQPGRLKRTAQLAIASAVFALLAACGGGDDNAAPTQTASVKMQVVSFGDSLSDVGTYSPQILLGFGGGRFT TNPGEVWTQKVAEFYGDTLKPAYEGGFGVPLQATGGLGYAQGGSRVTQQPGIGHADASVANADYAQATTTPISTQVQQYL QQYGSFNANQIVLVNGGANDILLQAQIAQAAGGTPAAQLAAAQAVGLAAQQLGGIIAKIAASGATHVFVSNMPDIGTTPL AVAGGAATAAALTQLSGLFNKTLAGTLTALNVDTTKVKLMDTFTWQDGIGANLAANGFSVGNTGTACNLTAMATAAAKAG VAQASAFASSLFCSPQTYTAPNADQTYMFADSVHPSTRLHALFAQFVEQQITASGVGAPK >Mature_380_residues MKPTPTATPRQPGRLKRTAQLAIASAVFALLAACGGGDDNAAPTQTASVKMQVVSFGDSLSDVGTYSPQILLGFGGGRFT TNPGEVWTQKVAEFYGDTLKPAYEGGFGVPLQATGGLGYAQGGSRVTQQPGIGHADASVANADYAQATTTPISTQVQQYL QQYGSFNANQIVLVNGGANDILLQAQIAQAAGGTPAAQLAAAQAVGLAAQQLGGIIAKIAASGATHVFVSNMPDIGTTPL AVAGGAATAAALTQLSGLFNKTLAGTLTALNVDTTKVKLMDTFTWQDGIGANLAANGFSVGNTGTACNLTAMATAAAKAG VAQASAFASSLFCSPQTYTAPNADQTYMFADSVHPSTRLHALFAQFVEQQITASGVGAPK
Specific function: Unknown
COG id: COG3240
COG function: function code IR; Phospholipase/lecithinase/hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38325; Mature: 38325
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTPTATPRQPGRLKRTAQLAIASAVFALLAACGGGDDNAAPTQTASVKMQVVSFGDSL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCH SDVGTYSPQILLGFGGGRFTTNPGEVWTQKVAEFYGDTLKPAYEGGFGVPLQATGGLGYA HHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCEEECCCCCCC QGGSRVTQQPGIGHADASVANADYAQATTTPISTQVQQYLQQYGSFNANQIVLVNGGAND CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCC ILLQAQIAQAAGGTPAAQLAAAQAVGLAAQQLGGIIAKIAASGATHVFVSNMPDIGTTPL EEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCE AVAGGAATAAALTQLSGLFNKTLAGTLTALNVDTTKVKLMDTFTWQDGIGANLAANGFSV EEECCHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEEEECCCCCCCCCEECCCEEC GNTGTACNLTAMATAAAKAGVAQASAFASSLFCSPQTYTAPNADQTYMFADSVHPSTRLH CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHH ALFAQFVEQQITASGVGAPK HHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKPTPTATPRQPGRLKRTAQLAIASAVFALLAACGGGDDNAAPTQTASVKMQVVSFGDSL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCH SDVGTYSPQILLGFGGGRFTTNPGEVWTQKVAEFYGDTLKPAYEGGFGVPLQATGGLGYA HHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCEEECCCCCCC QGGSRVTQQPGIGHADASVANADYAQATTTPISTQVQQYLQQYGSFNANQIVLVNGGAND CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCC ILLQAQIAQAAGGTPAAQLAAAQAVGLAAQQLGGIIAKIAASGATHVFVSNMPDIGTTPL EEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCE AVAGGAATAAALTQLSGLFNKTLAGTLTALNVDTTKVKLMDTFTWQDGIGANLAANGFSV EEECCHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEEEECCCCCCCCCEECCCEEC GNTGTACNLTAMATAAAKAGVAQASAFASSLFCSPQTYTAPNADQTYMFADSVHPSTRLH CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHH ALFAQFVEQQITASGVGAPK HHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA