| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028517
Identifier: 238028517
GI number: 238028517
Start: 3375942
End: 3376136
Strand: Direct
Name: 238028517
Synonym: bglu_1g29810
Alternate gene names: NA
Gene position: 3375942-3376136 (Clockwise)
Preceding gene: 238028507
Following gene: 238028518
Centisome position: 86.42
GC content: 66.67
Gene sequence:
>195_bases ATGAGTGAAATCAAGGAACGACCGCTCGTCGAACTGTCGGCAAAGGATCTGCCGGCGTACTGCCCGAACCCGGCGATGGC GCGCTGGAGCGCCCATCCGCGCGTGTTCATCGACGTCACGCACGGCGAGGCGCGCTGCCCCTACTGCGGCACGCGCTACA AGCTGCGCGACGGCGAGGTGGTCCACGGCCATTGA
Upstream 100 bases:
>100_bases TTTTTCGCTATCGTGTCGGGCAACGACGGCACGCCTGACCAGGCCCGTGATTCGCCAGGCGGCGCGCGCCGTTCCCCCTT TACCGCAACAAGAGACCGCC
Downstream 100 bases:
>100_bases GGGCCGCCGGCCCCGCCGAACCCGGCGCGCCGCCCGGGCCGCCCCTCGTCTCACTCGTCCCGCCCACCCGAGCGCGGCGC CACGGCGCCGCGTTTCATCA
Product: CHCC-type zinc finger protein
Products: NA
Alternate protein names: Zinc-Finger Domain-Containing Protein
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MSEIKERPLVELSAKDLPAYCPNPAMARWSAHPRVFIDVTHGEARCPYCGTRYKLRDGEVVHGH
Sequences:
>Translated_64_residues MSEIKERPLVELSAKDLPAYCPNPAMARWSAHPRVFIDVTHGEARCPYCGTRYKLRDGEVVHGH >Mature_63_residues SEIKERPLVELSAKDLPAYCPNPAMARWSAHPRVFIDVTHGEARCPYCGTRYKLRDGEVVHGH
Specific function: Unknown
COG id: COG4391
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7263; Mature: 7132
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIKERPLVELSAKDLPAYCPNPAMARWSAHPRVFIDVTHGEARCPYCGTRYKLRDGEV CCCCCCCCEEEECCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCEEEECCCEE VHGH EECC >Mature Secondary Structure SEIKERPLVELSAKDLPAYCPNPAMARWSAHPRVFIDVTHGEARCPYCGTRYKLRDGEV CCCCCCCEEEECCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCEEEECCCEE VHGH EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA