| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is kynB [H]
Identifier: 238028474
GI number: 238028474
Start: 3325569
End: 3326213
Strand: Direct
Name: kynB [H]
Synonym: bglu_1g29380
Alternate gene names: 238028474
Gene position: 3325569-3326213 (Clockwise)
Preceding gene: 238028472
Following gene: 238028475
Centisome position: 85.13
GC content: 73.18
Gene sequence:
>645_bases ATGGCTACGCTTTGGGACATCTCCCCCGACATTTTCGCCGATACGCCGGTCTGGCCGGGTGACACGCGTGTGTCGGTCGA TCGCGTCTGGCGCATCGAGGCCGGCTCGCCCGTCAACGTCGCCCGGCTGACGCTCTCGCCGCATACCGGCGCACATGCCG ACGCGCCGCTGCACTACGACGCGCATGGCGCGCCGATCGGTGCCGTGCCGCTGGACACCTACCTCGGCGCGTGCCGCGTG ATCCACTGCCTGGGCGCCGCGCCGCTGGTGCGGCCCGAGCAGTTGGCCGCCTCGCTCGCCGGCGCGCCGCCGCGCGTGCT GCTGCGCACCTACGCGCGCGCCCCGCGCGAGACCTGGGACAGCGCATTCTGCGCCGTCGCGCCCGAAACCATCGACCTGC TCGCCGCGCACGGCGTGCGGCTGGTGGGCATCGACACGCCGTCGCTCGACCCGCAGGAATCGAAGACCATGGACGCGCAC CGGCGCGTCGGCGCGCATGCGATGGCGATCCTCGAAGGGCTGGTGCTCGACGAGGTCGCGGCGGGCGACTACGAGCTGAT CGCGCTGCCGCTGAAGTTTACGACGCTCGACGCAAGCCCGGTGCGCGCGGTGCTGCGCGCGCTGCCGGCACCGGCCGCGC CGTAG
Upstream 100 bases:
>100_bases TATCTGCGATATTTGCCGAATGTCCATGTTTATTTCGCAAGCACCTTTCGGCGACGTTTGCTTATGATCGTGTGCATCGA TACCCCGAAAACACACGCAG
Downstream 100 bases:
>100_bases GCGGCGGGCCGCGGCGGCGGCTCGGGCCGCAGATCGCCCCCGCTCCCGGTCATCCGCCTGCCGGCCGCGGCCGCCGGCCT GAATCAGGATTGGTTCTTTC
Product: arylformamidase
Products: NA
Alternate protein names: KFA; N-formylkynurenine formamidase [H]
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MATLWDISPDIFADTPVWPGDTRVSVDRVWRIEAGSPVNVARLTLSPHTGAHADAPLHYDAHGAPIGAVPLDTYLGACRV IHCLGAAPLVRPEQLAASLAGAPPRVLLRTYARAPRETWDSAFCAVAPETIDLLAAHGVRLVGIDTPSLDPQESKTMDAH RRVGAHAMAILEGLVLDEVAAGDYELIALPLKFTTLDASPVRAVLRALPAPAAP
Sequences:
>Translated_214_residues MATLWDISPDIFADTPVWPGDTRVSVDRVWRIEAGSPVNVARLTLSPHTGAHADAPLHYDAHGAPIGAVPLDTYLGACRV IHCLGAAPLVRPEQLAASLAGAPPRVLLRTYARAPRETWDSAFCAVAPETIDLLAAHGVRLVGIDTPSLDPQESKTMDAH RRVGAHAMAILEGLVLDEVAAGDYELIALPLKFTTLDASPVRAVLRALPAPAAP >Mature_213_residues ATLWDISPDIFADTPVWPGDTRVSVDRVWRIEAGSPVNVARLTLSPHTGAHADAPLHYDAHGAPIGAVPLDTYLGACRVI HCLGAAPLVRPEQLAASLAGAPPRVLLRTYARAPRETWDSAFCAVAPETIDLLAAHGVRLVGIDTPSLDPQESKTMDAHR RVGAHAMAILEGLVLDEVAAGDYELIALPLKFTTLDASPVRAVLRALPAPAAP
Specific function: Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine [H]
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kynB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017484 - InterPro: IPR007325 [H]
Pfam domain/function: PF04199 Cyclase [H]
EC number: =3.5.1.9 [H]
Molecular weight: Translated: 22642; Mature: 22511
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLWDISPDIFADTPVWPGDTRVSVDRVWRIEAGSPVNVARLTLSPHTGAHADAPLHYD CCEECCCCCCCEECCCCCCCCCEEEHEEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEC AHGAPIGAVPLDTYLGACRVIHCLGAAPLVRPEQLAASLAGAPPRVLLRTYARAPRETWD CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHH SAFCAVAPETIDLLAAHGVRLVGIDTPSLDPQESKTMDAHRRVGAHAMAILEGLVLDEVA CEEEEECCHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC AGDYELIALPLKFTTLDASPVRAVLRALPAPAAP CCCEEEEEEEEEEEECCCHHHHHHHHHCCCCCCC >Mature Secondary Structure ATLWDISPDIFADTPVWPGDTRVSVDRVWRIEAGSPVNVARLTLSPHTGAHADAPLHYD CEECCCCCCCEECCCCCCCCCEEEHEEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEC AHGAPIGAVPLDTYLGACRVIHCLGAAPLVRPEQLAASLAGAPPRVLLRTYARAPRETWD CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHH SAFCAVAPETIDLLAAHGVRLVGIDTPSLDPQESKTMDAHRRVGAHAMAILEGLVLDEVA CEEEEECCHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC AGDYELIALPLKFTTLDASPVRAVLRALPAPAAP CCCEEEEEEEEEEEECCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA