| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028422
Identifier: 238028422
GI number: 238028422
Start: 3270278
End: 3271240
Strand: Reverse
Name: 238028422
Synonym: bglu_1g28860
Alternate gene names: NA
Gene position: 3271240-3270278 (Counterclockwise)
Preceding gene: 238028423
Following gene: 238028421
Centisome position: 83.74
GC content: 67.08
Gene sequence:
>963_bases ATGACGACTCACGACACGCCCGTCAGCAAGGTGCTGGTGCTCGACGACAGCGCGACCCACCTCGACGCGATCCGCCAGTT CTGCGACGAGCACAACCTGGTCGGCCTCAAGGCGCGCCGCAACCGGCTGCTGAAGGTGCTGCGCTCGAACATCGATCTCG GCGCGGTGCTGCTCGCGTTCGACTACGGCGGCTCGACCGACGAGGCTGCCGCGGTGGCCGCGCAGATCGACGCGCTGCGC CCCGAACTGCCGATCATCGTGCGGCGTCCCGACGGCAGCGCCGCCGACGGCCTGCCCGAGGCGCTCAGGCGCGTGGCCTG CGCCAGCTACGCGCTGCCCGACCTCGCGCCGCTGCGCCGCGCCGTCGACGAATACTTGTTCAGCCTCGCCTACCCGAACG CACTGGTGCGCGGCATCGAGGAGATCACCGAGGCGCGCCTCGCCACGATCTTCCGCGGCATGACGATCGGCTGCGAGACG CCCTGCATCGTGCGCGACCAGATCATCTACGGCGAGGTGTTCAGCCTGATCGCGCTGGAAAGCGCGTGGTGCCGCGGCTA CATGATGATGCAGACCGACGAGCAGCCGATGCTCGACTTCGTCGCGGCGATGCATCCGGACGAGCGGGCACCGGATTTCC GCGACCTGAACGGGGTGCTCGGCGAGCTGACGAACCTGGTGTGGGGCGCCTTCAAGGATCGCTTCCTGGGCAGCAGCCAG ATACCGGCCGCGAGTTCGGTGCAGGTGCCGCTGCTCGTGAACCACAAGCACAAGTACATTTCGTTCGGCTCCGAGAACCC GCAACTGTGTTTCAAGTACCGGGTGACCGACGACAAGTCGGGCCGCACCGTGACGCTGCATCAGCGTTTCGTGTTCAGCC TGCAATGGTCGCCGGAGTCGTTCGACGATCACGCGCAGGCGGTCGGCGACATGGTCGACGCCGGCGAGCTGGACTGGTTT TAA
Upstream 100 bases:
>100_bases CCGTCGATTTCGTGGCGCAGACGCTCGATGTCGATGCGGGCGCGGGCGAGCTCGAATTGTTTTGATGGAAGAACCGAATC ACCCCTCGGCAGGAGAAGGC
Downstream 100 bases:
>100_bases GCAACCGACAAGGGACGACGAACATGGCAAAGATTCTGGTGGTGGACGATTCGAGCACGGTGCGCGACGAAGTGGCGGGC TTCCTGCGCAAGAACGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MTTHDTPVSKVLVLDDSATHLDAIRQFCDEHNLVGLKARRNRLLKVLRSNIDLGAVLLAFDYGGSTDEAAAVAAQIDALR PELPIIVRRPDGSAADGLPEALRRVACASYALPDLAPLRRAVDEYLFSLAYPNALVRGIEEITEARLATIFRGMTIGCET PCIVRDQIIYGEVFSLIALESAWCRGYMMMQTDEQPMLDFVAAMHPDERAPDFRDLNGVLGELTNLVWGAFKDRFLGSSQ IPAASSVQVPLLVNHKHKYISFGSENPQLCFKYRVTDDKSGRTVTLHQRFVFSLQWSPESFDDHAQAVGDMVDAGELDWF
Sequences:
>Translated_320_residues MTTHDTPVSKVLVLDDSATHLDAIRQFCDEHNLVGLKARRNRLLKVLRSNIDLGAVLLAFDYGGSTDEAAAVAAQIDALR PELPIIVRRPDGSAADGLPEALRRVACASYALPDLAPLRRAVDEYLFSLAYPNALVRGIEEITEARLATIFRGMTIGCET PCIVRDQIIYGEVFSLIALESAWCRGYMMMQTDEQPMLDFVAAMHPDERAPDFRDLNGVLGELTNLVWGAFKDRFLGSSQ IPAASSVQVPLLVNHKHKYISFGSENPQLCFKYRVTDDKSGRTVTLHQRFVFSLQWSPESFDDHAQAVGDMVDAGELDWF >Mature_319_residues TTHDTPVSKVLVLDDSATHLDAIRQFCDEHNLVGLKARRNRLLKVLRSNIDLGAVLLAFDYGGSTDEAAAVAAQIDALRP ELPIIVRRPDGSAADGLPEALRRVACASYALPDLAPLRRAVDEYLFSLAYPNALVRGIEEITEARLATIFRGMTIGCETP CIVRDQIIYGEVFSLIALESAWCRGYMMMQTDEQPMLDFVAAMHPDERAPDFRDLNGVLGELTNLVWGAFKDRFLGSSQI PAASSVQVPLLVNHKHKYISFGSENPQLCFKYRVTDDKSGRTVTLHQRFVFSLQWSPESFDDHAQAVGDMVDAGELDWF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35559; Mature: 35428
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHDTPVSKVLVLDDSATHLDAIRQFCDEHNLVGLKARRNRLLKVLRSNIDLGAVLLAF CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCEEEEEEE DYGGSTDEAAAVAAQIDALRPELPIIVRRPDGSAADGLPEALRRVACASYALPDLAPLRR ECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH AVDEYLFSLAYPNALVRGIEEITEARLATIFRGMTIGCETPCIVRDQIIYGEVFSLIALE HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHH SAWCRGYMMMQTDEQPMLDFVAAMHPDERAPDFRDLNGVLGELTNLVWGAFKDRFLGSSQ HHHHCCEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC IPAASSVQVPLLVNHKHKYISFGSENPQLCFKYRVTDDKSGRTVTLHQRFVFSLQWSPES CCCCCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCC FDDHAQAVGDMVDAGELDWF CHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTHDTPVSKVLVLDDSATHLDAIRQFCDEHNLVGLKARRNRLLKVLRSNIDLGAVLLAF CCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCEEEEEEE DYGGSTDEAAAVAAQIDALRPELPIIVRRPDGSAADGLPEALRRVACASYALPDLAPLRR ECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH AVDEYLFSLAYPNALVRGIEEITEARLATIFRGMTIGCETPCIVRDQIIYGEVFSLIALE HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHH SAWCRGYMMMQTDEQPMLDFVAAMHPDERAPDFRDLNGVLGELTNLVWGAFKDRFLGSSQ HHHHCCEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC IPAASSVQVPLLVNHKHKYISFGSENPQLCFKYRVTDDKSGRTVTLHQRFVFSLQWSPES CCCCCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCC FDDHAQAVGDMVDAGELDWF CHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA