Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028423

Identifier: 238028423

GI number: 238028423

Start: 3271276

End: 3271812

Strand: Reverse

Name: 238028423

Synonym: bglu_1g28870

Alternate gene names: NA

Gene position: 3271812-3271276 (Counterclockwise)

Preceding gene: 238028424

Following gene: 238028422

Centisome position: 83.75

GC content: 69.83

Gene sequence:

>537_bases
GTGATCGGCGCGAACGCGCGCGAGAGCTTCGAGCGGATCTTCTTCGGCGCGGCGCAGGCGCGGCTCGCGACCGACGGCGT
CTGCGAGATCACGCCGCGCGAGGCGCCGGATGTGTCGCGCGGCATCGAGGCGATCGTGCTGACCATCTCGTCGCTGCGCT
TTCGCCTGCTGCTGCTGCTGCACTACCGCGACGACCCCGCCACGCGCGCCTATTACATCGGCACCGGCGGCACGGCCGGA
CAGCGGCCGCTGCGCGAGGCGTTCCTGGAAGTCGCGAACCTCTGCTGCGGCGCGATCAACCAGGCGCTCGTCGAGCATTT
CCCCGATCTCGGGATGTCGACGCCGTATGGCCTGAACGGCGCGAGCGCCGCGCATCTCGTCGAGCTGAGGCCCGACCACG
TGAGCGCCTATGACCTGATGGTGGGCGGCACGGTGCGGCTCGGCGCGACGCTCTGCGTCTGCGCGAACGCGCCCGTCGAT
TTCGTGGCGCAGACGCTCGATGTCGATGCGGGCGCGGGCGAGCTCGAATTGTTTTGA

Upstream 100 bases:

>100_bases
TCCAGGACATCCAGGCGGGCGGCAAGATGATCACCGCCTCGCTCGGCAACGTCGACCTGCTGGCCACCCAGTTGCGCGAC
CGGCTCGAACGGAGCGAATC

Downstream 100 bases:

>100_bases
TGGAAGAACCGAATCACCCCTCGGCAGGAGAAGGCATGACGACTCACGACACGCCCGTCAGCAAGGTGCTGGTGCTCGAC
GACAGCGCGACCCACCTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MIGANARESFERIFFGAAQARLATDGVCEITPREAPDVSRGIEAIVLTISSLRFRLLLLLHYRDDPATRAYYIGTGGTAG
QRPLREAFLEVANLCCGAINQALVEHFPDLGMSTPYGLNGASAAHLVELRPDHVSAYDLMVGGTVRLGATLCVCANAPVD
FVAQTLDVDAGAGELELF

Sequences:

>Translated_178_residues
MIGANARESFERIFFGAAQARLATDGVCEITPREAPDVSRGIEAIVLTISSLRFRLLLLLHYRDDPATRAYYIGTGGTAG
QRPLREAFLEVANLCCGAINQALVEHFPDLGMSTPYGLNGASAAHLVELRPDHVSAYDLMVGGTVRLGATLCVCANAPVD
FVAQTLDVDAGAGELELF
>Mature_178_residues
MIGANARESFERIFFGAAQARLATDGVCEITPREAPDVSRGIEAIVLTISSLRFRLLLLLHYRDDPATRAYYIGTGGTAG
QRPLREAFLEVANLCCGAINQALVEHFPDLGMSTPYGLNGASAAHLVELRPDHVSAYDLMVGGTVRLGATLCVCANAPVD
FVAQTLDVDAGAGELELF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18982; Mature: 18982

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGANARESFERIFFGAAQARLATDGVCEITPREAPDVSRGIEAIVLTISSLRFRLLLLL
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HYRDDPATRAYYIGTGGTAGQRPLREAFLEVANLCCGAINQALVEHFPDLGMSTPYGLNG
HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ASAAHLVELRPDHVSAYDLMVGGTVRLGATLCVCANAPVDFVAQTLDVDAGAGELELF
CCCEEEEEECCCCCCEEHEEECCEEECCCEEEEECCCCHHHHHHHHCCCCCCCCEECC
>Mature Secondary Structure
MIGANARESFERIFFGAAQARLATDGVCEITPREAPDVSRGIEAIVLTISSLRFRLLLLL
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HYRDDPATRAYYIGTGGTAGQRPLREAFLEVANLCCGAINQALVEHFPDLGMSTPYGLNG
HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ASAAHLVELRPDHVSAYDLMVGGTVRLGATLCVCANAPVDFVAQTLDVDAGAGELELF
CCCEEEEEECCCCCCEEHEEECCEEECCCEEEEECCCCHHHHHHHHCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA