| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028387
Identifier: 238028387
GI number: 238028387
Start: 3228943
End: 3229449
Strand: Reverse
Name: 238028387
Synonym: bglu_1g28480
Alternate gene names: NA
Gene position: 3229449-3228943 (Counterclockwise)
Preceding gene: 238028388
Following gene: 238028386
Centisome position: 82.67
GC content: 65.29
Gene sequence:
>507_bases ATGATCGATCGCGGCGGCCCGTATGGTCGCGCGATGGGCGCGGCCGTCACGGCGCGCGACGCCGCGCTCGTGCGTTGCCG CGACGCCCGCCTCCGCAAGCTCGCAGGGATCCTCGATGACATCGAGAGTTGCTTCTGGAATCGTGGCGATGACGCAGGGA AGCTCGTAGCGATCGCCGTCACGCTCGCCTCGACGCTCGCGCTTGAAGCCCCGCGTCTGACGACAAAGCAACTTGGAACC GCCTGCGACAAGTTCGTCCAGGCGATTGCCGCTGCTGAACAGGACTCGGCGAACTATCGTCGTCGACAGTATCGACAACT GCGGCAAGCCTATCGTGCGCTTTACAACGACATCGATGCGCAGTGCACGGACGGGACGCGCCGTTTGCAAGTTAGCGCCC TGCTGCGGGGCGTCGCGCTCGGCCAATCACTGGCGCAGGGCAGCTCGCGACTGGATATCGAACAGCTCAAGCTGGCGACT GCCGTGCTCAAGGGGGAGGCCGCCTGA
Upstream 100 bases:
>100_bases AGTTAGGGGCCAGGAGCGTCGGCTGGCGCGCGCAAGACGTCCAGAACTGGGTCGAATCCCGCCAATCGACGCGGGAGCAA GCATGAGCGCGCCCTCCCTT
Downstream 100 bases:
>100_bases TGCTCGCCCAAAGTCGCTTTGCACTAGGCAATACACGGCGAGGGCGTTGCGATTTGCGTCGTCCAGCATCGCGCGGTATC CTGTGCGCGTCGCTGAGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MIDRGGPYGRAMGAAVTARDAALVRCRDARLRKLAGILDDIESCFWNRGDDAGKLVAIAVTLASTLALEAPRLTTKQLGT ACDKFVQAIAAAEQDSANYRRRQYRQLRQAYRALYNDIDAQCTDGTRRLQVSALLRGVALGQSLAQGSSRLDIEQLKLAT AVLKGEAA
Sequences:
>Translated_168_residues MIDRGGPYGRAMGAAVTARDAALVRCRDARLRKLAGILDDIESCFWNRGDDAGKLVAIAVTLASTLALEAPRLTTKQLGT ACDKFVQAIAAAEQDSANYRRRQYRQLRQAYRALYNDIDAQCTDGTRRLQVSALLRGVALGQSLAQGSSRLDIEQLKLAT AVLKGEAA >Mature_168_residues MIDRGGPYGRAMGAAVTARDAALVRCRDARLRKLAGILDDIESCFWNRGDDAGKLVAIAVTLASTLALEAPRLTTKQLGT ACDKFVQAIAAAEQDSANYRRRQYRQLRQAYRALYNDIDAQCTDGTRRLQVSALLRGVALGQSLAQGSSRLDIEQLKLAT AVLKGEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18169; Mature: 18169
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDRGGPYGRAMGAAVTARDAALVRCRDARLRKLAGILDDIESCFWNRGDDAGKLVAIAV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH TLASTLALEAPRLTTKQLGTACDKFVQAIAAAEQDSANYRRRQYRQLRQAYRALYNDIDA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC QCTDGTRRLQVSALLRGVALGQSLAQGSSRLDIEQLKLATAVLKGEAA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MIDRGGPYGRAMGAAVTARDAALVRCRDARLRKLAGILDDIESCFWNRGDDAGKLVAIAV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH TLASTLALEAPRLTTKQLGTACDKFVQAIAAAEQDSANYRRRQYRQLRQAYRALYNDIDA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC QCTDGTRRLQVSALLRGVALGQSLAQGSSRLDIEQLKLATAVLKGEAA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA