Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028388

Identifier: 238028388

GI number: 238028388

Start: 3230297

End: 3232120

Strand: Reverse

Name: 238028388

Synonym: bglu_1g28490

Alternate gene names: NA

Gene position: 3232120-3230297 (Counterclockwise)

Preceding gene: 238028393

Following gene: 238028387

Centisome position: 82.74

GC content: 56.03

Gene sequence:

>1824_bases
ATGAGACTGGAATCTGTTTCGATAAAAAACTTCCGTTGCTACCGTGAAGAGACCACGGTATCTATGGCGGACCTGACGAC
TTTTGTTGGGAAAAATGACATAGGAAAGTCCTCGGTCCTCGAGGCGCTGGAGATCTTCTTCAACAACGAAACTGTCAAGA
TAGAGCAGGGTGACGCGAACATCTACAGCGGCGCCCCCCTGGTTTCTATCACCTGCGAATTTTCTGATTTGCCATCCCAG
TTGAGCCTCGACGCAGGGGCAGAGACGACTCTAGCAGCAGAATACCTTCTCTCTACCAGGGGCACCCTGAAGATCCAAAA
GGTATTCGATTGCAGCAAGAAGACGCCGTCCGCCGAAGTGTATATCCTTGCGAACCACCCGACGGCAACCGGGGTTGCAG
ACCTTCTTGATCTGAAGGAAAAGGATCTTCAAAAGCTTGTAAAAGACCAGAAGCTCGATGCCGCGCTTAAAGGGAATCCA
GGTATGCGGCGGGCCTTGTGGGCGGCGGCGAAAGACCTCGAACTGCAGGAAGTGGCTCTTCCTGTCACCAAGCCGAAGGA
AGATAGCAAACGGATCTGGGATCAGCTCGAAAACTACTTGCCGATGTATGCGCTGTTTCAGAGCGATCGGAGCAGCCGCG
ATTCTGACGGGGAGGTACAAAATCCGATGAGGGCAGCAGTGGCAGCCGCCATCGCCGAAGTGCAGGACGACATCAACCGG
ATTCAGGAAAAGGTTCGCGAGAAAGCCGAGCTAATTGCGAAGATCACTCACGAAGCTTTGAAGACGATCGACCCCAACCT
TGCCAAGGAGCTGACGCCGCAATTCATGCCACCGACTGCAGCCAAGTGGACCGGGTTGTTTTCGGTCGGCATGGACACCG
ACGACGGCATTCCGCTAAACAAGCGCGGCAGCGGCGTCCGTCGCCTTGTCTTGGTTGCCTTTTTCAAGGCGGAAGCGGAG
CGCAGGTTGAAGGCCGGCACCAGCAGGAGCATCATTTACGCGATCGAGGAGCCCGAGACGGCGCAGCACCCGAACAACCA
ACGCATCCTTATAGAGTCATTCAAGACGTTGGCTTTGGAGCCCGGATGTCAGGTTTTGCTCACGACGCACAGCCCCGGCT
TCGCGTCGGATCTGCCTACCGCCAGTATCAGGTTTGTAACGCGAGACGCGGCTCTTCAACCCGTGATCCTGGAGGGCGCA
GACGTATTCGGGCAGGTGGCTGAAACGCTCGGTGTCGTGCCGGATAGTCGTGTCAAAGTCCTACTTTGCGTCGAAGGACC
GACAGACGTGGCCGCCTTTAAATCGCTCAGTCGGGCGTTACATTTGACCGACCCAACCCTGCCGAACCTAGCTTCGGATG
ACCGAGTGGCCTTCGTATTGCTCGGTGGCTCAACGCTCAAGCATTGGGTCACACAACATTATCTCCGGTCGCTCAATCGT
CCCGAGGTCCATATCTACGACAGCGACGTGGCCAAGTATGCGGAATCTGTTGCTGAGGTAAACCTGCGCACGGATGGCTC
CTGGGCCGTGCAAACGAACAAGCACGAGATCGAATGCTATCTGCATGCGGACGCGATCAAGGATGCTTTTGGCGTCGAGA
TTGTCGTCGTCGATCAGCCCGGCGCCGACGGGAAGTCTGTCCCGAAGATTTTCGCTGAAGCCTTCTCTGCGAAGCAACAG
TACGATGGGGTTATGGGCGATGAAAAAGCAAAGCTACGCCTCGCGGATAAGGCATTTCCCATGATGACTGCGGAGCGGCT
GGCCGAAAGGGATCCCGCACGAGAGGTTGAGGGGTGGTTCCGCAGACTTGGGGCGATGCTGTAA

Upstream 100 bases:

>100_bases
CGTCGGCCAAGACTCTGTTCGCTGCGCTCAGAGGTCCGCCGTCCACCTCAGAGTAATATTTGACGGCTCGAACTGTCGGG
CTACAAATAAGGAGAGCGAG

Downstream 100 bases:

>100_bases
GCGCCGGATACGCGGGCCGCGCGCTTGCGGCCCGTGCGACAGGAGTGACATAGCTGCCGGCCACGAATGGCACTTTTTGA
AGCTATGTGATCACTCCCCT

Product: ATP-dependent OLD family endonuclease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 607; Mature: 607

Protein sequence:

>607_residues
MRLESVSIKNFRCYREETTVSMADLTTFVGKNDIGKSSVLEALEIFFNNETVKIEQGDANIYSGAPLVSITCEFSDLPSQ
LSLDAGAETTLAAEYLLSTRGTLKIQKVFDCSKKTPSAEVYILANHPTATGVADLLDLKEKDLQKLVKDQKLDAALKGNP
GMRRALWAAAKDLELQEVALPVTKPKEDSKRIWDQLENYLPMYALFQSDRSSRDSDGEVQNPMRAAVAAAIAEVQDDINR
IQEKVREKAELIAKITHEALKTIDPNLAKELTPQFMPPTAAKWTGLFSVGMDTDDGIPLNKRGSGVRRLVLVAFFKAEAE
RRLKAGTSRSIIYAIEEPETAQHPNNQRILIESFKTLALEPGCQVLLTTHSPGFASDLPTASIRFVTRDAALQPVILEGA
DVFGQVAETLGVVPDSRVKVLLCVEGPTDVAAFKSLSRALHLTDPTLPNLASDDRVAFVLLGGSTLKHWVTQHYLRSLNR
PEVHIYDSDVAKYAESVAEVNLRTDGSWAVQTNKHEIECYLHADAIKDAFGVEIVVVDQPGADGKSVPKIFAEAFSAKQQ
YDGVMGDEKAKLRLADKAFPMMTAERLAERDPAREVEGWFRRLGAML

Sequences:

>Translated_607_residues
MRLESVSIKNFRCYREETTVSMADLTTFVGKNDIGKSSVLEALEIFFNNETVKIEQGDANIYSGAPLVSITCEFSDLPSQ
LSLDAGAETTLAAEYLLSTRGTLKIQKVFDCSKKTPSAEVYILANHPTATGVADLLDLKEKDLQKLVKDQKLDAALKGNP
GMRRALWAAAKDLELQEVALPVTKPKEDSKRIWDQLENYLPMYALFQSDRSSRDSDGEVQNPMRAAVAAAIAEVQDDINR
IQEKVREKAELIAKITHEALKTIDPNLAKELTPQFMPPTAAKWTGLFSVGMDTDDGIPLNKRGSGVRRLVLVAFFKAEAE
RRLKAGTSRSIIYAIEEPETAQHPNNQRILIESFKTLALEPGCQVLLTTHSPGFASDLPTASIRFVTRDAALQPVILEGA
DVFGQVAETLGVVPDSRVKVLLCVEGPTDVAAFKSLSRALHLTDPTLPNLASDDRVAFVLLGGSTLKHWVTQHYLRSLNR
PEVHIYDSDVAKYAESVAEVNLRTDGSWAVQTNKHEIECYLHADAIKDAFGVEIVVVDQPGADGKSVPKIFAEAFSAKQQ
YDGVMGDEKAKLRLADKAFPMMTAERLAERDPAREVEGWFRRLGAML
>Mature_607_residues
MRLESVSIKNFRCYREETTVSMADLTTFVGKNDIGKSSVLEALEIFFNNETVKIEQGDANIYSGAPLVSITCEFSDLPSQ
LSLDAGAETTLAAEYLLSTRGTLKIQKVFDCSKKTPSAEVYILANHPTATGVADLLDLKEKDLQKLVKDQKLDAALKGNP
GMRRALWAAAKDLELQEVALPVTKPKEDSKRIWDQLENYLPMYALFQSDRSSRDSDGEVQNPMRAAVAAAIAEVQDDINR
IQEKVREKAELIAKITHEALKTIDPNLAKELTPQFMPPTAAKWTGLFSVGMDTDDGIPLNKRGSGVRRLVLVAFFKAEAE
RRLKAGTSRSIIYAIEEPETAQHPNNQRILIESFKTLALEPGCQVLLTTHSPGFASDLPTASIRFVTRDAALQPVILEGA
DVFGQVAETLGVVPDSRVKVLLCVEGPTDVAAFKSLSRALHLTDPTLPNLASDDRVAFVLLGGSTLKHWVTQHYLRSLNR
PEVHIYDSDVAKYAESVAEVNLRTDGSWAVQTNKHEIECYLHADAIKDAFGVEIVVVDQPGADGKSVPKIFAEAFSAKQQ
YDGVMGDEKAKLRLADKAFPMMTAERLAERDPAREVEGWFRRLGAML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66871; Mature: 66871

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLESVSIKNFRCYREETTVSMADLTTFVGKNDIGKSSVLEALEIFFNNETVKIEQGDAN
CCCCCCCCCCEEEEHHHCCEEHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCC
IYSGAPLVSITCEFSDLPSQLSLDAGAETTLAAEYLLSTRGTLKIQKVFDCSKKTPSAEV
EECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCEE
YILANHPTATGVADLLDLKEKDLQKLVKDQKLDAALKGNPGMRRALWAAAKDLELQEVAL
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCCHHHHCC
PVTKPKEDSKRIWDQLENYLPMYALFQSDRSSRDSDGEVQNPMRAAVAAAIAEVQDDINR
CCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IQEKVREKAELIAKITHEALKTIDPNLAKELTPQFMPPTAAKWTGLFSVGMDTDDGIPLN
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHCEEEEECCCCCCCCCCC
KRGSGVRRLVLVAFFKAEAERRLKAGTSRSIIYAIEEPETAQHPNNQRILIESFKTLALE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHEEC
PGCQVLLTTHSPGFASDLPTASIRFVTRDAALQPVILEGADVFGQVAETLGVVPDSRVKV
CCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHCCCCCCCEEE
LLCVEGPTDVAAFKSLSRALHLTDPTLPNLASDDRVAFVLLGGSTLKHWVTQHYLRSLNR
EEEECCCCHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCC
PEVHIYDSDVAKYAESVAEVNLRTDGSWAVQTNKHEIECYLHADAIKDAFGVEIVVVDQP
CEEEEECCHHHHHHHHHHHEEEECCCCEEEECCCEEEEEEEEHHHHHHHHCEEEEEEECC
GADGKSVPKIFAEAFSAKQQYDGVMGDEKAKLRLADKAFPMMTAERLAERDPAREVEGWF
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHH
RRLGAML
HHHCCCC
>Mature Secondary Structure
MRLESVSIKNFRCYREETTVSMADLTTFVGKNDIGKSSVLEALEIFFNNETVKIEQGDAN
CCCCCCCCCCEEEEHHHCCEEHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCC
IYSGAPLVSITCEFSDLPSQLSLDAGAETTLAAEYLLSTRGTLKIQKVFDCSKKTPSAEV
EECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCEE
YILANHPTATGVADLLDLKEKDLQKLVKDQKLDAALKGNPGMRRALWAAAKDLELQEVAL
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCCHHHHCC
PVTKPKEDSKRIWDQLENYLPMYALFQSDRSSRDSDGEVQNPMRAAVAAAIAEVQDDINR
CCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IQEKVREKAELIAKITHEALKTIDPNLAKELTPQFMPPTAAKWTGLFSVGMDTDDGIPLN
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHCEEEEECCCCCCCCCCC
KRGSGVRRLVLVAFFKAEAERRLKAGTSRSIIYAIEEPETAQHPNNQRILIESFKTLALE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHEEC
PGCQVLLTTHSPGFASDLPTASIRFVTRDAALQPVILEGADVFGQVAETLGVVPDSRVKV
CCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHCCCCCCCEEE
LLCVEGPTDVAAFKSLSRALHLTDPTLPNLASDDRVAFVLLGGSTLKHWVTQHYLRSLNR
EEEECCCCHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCC
PEVHIYDSDVAKYAESVAEVNLRTDGSWAVQTNKHEIECYLHADAIKDAFGVEIVVVDQP
CEEEEECCHHHHHHHHHHHEEEECCCCEEEECCCEEEEEEEEHHHHHHHHCEEEEEEECC
GADGKSVPKIFAEAFSAKQQYDGVMGDEKAKLRLADKAFPMMTAERLAERDPAREVEGWF
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHH
RRLGAML
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA