| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238028384
Identifier: 238028384
GI number: 238028384
Start: 3227936
End: 3228148
Strand: Reverse
Name: 238028384
Synonym: bglu_1g28450
Alternate gene names: NA
Gene position: 3228148-3227936 (Counterclockwise)
Preceding gene: 238028385
Following gene: 238028383
Centisome position: 82.64
GC content: 62.44
Gene sequence:
>213_bases ATGTCTGAATTCCGCCTGCCGAACGAAGTCAAGATGATCGCCATGTGTGCGGCCCATCAGTTCGCCCATCTCGAAGCGCT GTTCGATGCCGTCCGTGCGCATCTTCCGGAGGACACCTACGAGCGCTCGCTCGTCGACATGGGGCAAGGCGTTGCGAGCC GGTACTCGGCCGAAATGCGCCGTACCGCGCAGCCGGAGGTGTGCCATGACTGA
Upstream 100 bases:
>100_bases GCCGTCCACGACTGGAACCTCACACCGATTCGCGGCGAAGCGGAGCAGGATTGCACGATCGACGTCCGGCAACTCCTCGC GTCGATCCTGGAGGTGCGCC
Downstream 100 bases:
>100_bases TCAGCGCATCCGAACCGCGGTTATCAACGGATTCGACAATGCGCCGCCACTCGATACCGGCGCTCCGATCGAGCTGCAAT TCGCCGTCGACCTTGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MSEFRLPNEVKMIAMCAAHQFAHLEALFDAVRAHLPEDTYERSLVDMGQGVASRYSAEMRRTAQPEVCHD
Sequences:
>Translated_70_residues MSEFRLPNEVKMIAMCAAHQFAHLEALFDAVRAHLPEDTYERSLVDMGQGVASRYSAEMRRTAQPEVCHD >Mature_69_residues SEFRLPNEVKMIAMCAAHQFAHLEALFDAVRAHLPEDTYERSLVDMGQGVASRYSAEMRRTAQPEVCHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7966; Mature: 7835
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFRLPNEVKMIAMCAAHQFAHLEALFDAVRAHLPEDTYERSLVDMGQGVASRYSAEMR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RTAQPEVCHD HCCCCCCCCC >Mature Secondary Structure SEFRLPNEVKMIAMCAAHQFAHLEALFDAVRAHLPEDTYERSLVDMGQGVASRYSAEMR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RTAQPEVCHD HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA