Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238028385

Identifier: 238028385

GI number: 238028385

Start: 3228141

End: 3228443

Strand: Reverse

Name: 238028385

Synonym: bglu_1g28460

Alternate gene names: NA

Gene position: 3228443-3228141 (Counterclockwise)

Preceding gene: 238028386

Following gene: 238028384

Centisome position: 82.64

GC content: 65.02

Gene sequence:

>303_bases
ATGGCTGAGCTGCGCTGCAAGATCGGCGATCTGGCGATCGTCACGCAATGCGATGCGCGCTCACGCATTGGCATGCTGGT
TGAGGTGGCATCGGCTTCCCCGACGCCCGATCACGATTGGCGCGTGCGGATCTTGGGCGGCCCCGTTGCGGGGCGCAGCG
CCTACGATCGGCGGTTCGGCGAATTCACGCATGCTGCCGTCCACGACTGGAACCTCACACCGATTCGCGGCGAAGCGGAG
CAGGATTGCACGATCGACGTCCGGCAACTCCTCGCGTCGATCCTGGAGGTGCGCCATGTCTGA

Upstream 100 bases:

>100_bases
CTGCGCGACGCGGCAACCGCCAGCACGTATCAAGACGCCCTCGATGCAACCGGCGCGGCACTGGCAGCGATCGCGGCGCT
CGTTCGTGCGGAGGTACGCC

Downstream 100 bases:

>100_bases
ATTCCGCCTGCCGAACGAAGTCAAGATGATCGCCATGTGTGCGGCCCATCAGTTCGCCCATCTCGAAGCGCTGTTCGATG
CCGTCCGTGCGCATCTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MAELRCKIGDLAIVTQCDARSRIGMLVEVASASPTPDHDWRVRILGGPVAGRSAYDRRFGEFTHAAVHDWNLTPIRGEAE
QDCTIDVRQLLASILEVRHV

Sequences:

>Translated_100_residues
MAELRCKIGDLAIVTQCDARSRIGMLVEVASASPTPDHDWRVRILGGPVAGRSAYDRRFGEFTHAAVHDWNLTPIRGEAE
QDCTIDVRQLLASILEVRHV
>Mature_99_residues
AELRCKIGDLAIVTQCDARSRIGMLVEVASASPTPDHDWRVRILGGPVAGRSAYDRRFGEFTHAAVHDWNLTPIRGEAEQ
DCTIDVRQLLASILEVRHV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11109; Mature: 10978

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELRCKIGDLAIVTQCDARSRIGMLVEVASASPTPDHDWRVRILGGPVAGRSAYDRRFG
CCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHH
EFTHAAVHDWNLTPIRGEAEQDCTIDVRQLLASILEVRHV
HHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AELRCKIGDLAIVTQCDARSRIGMLVEVASASPTPDHDWRVRILGGPVAGRSAYDRRFG
CCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHH
EFTHAAVHDWNLTPIRGEAEQDCTIDVRQLLASILEVRHV
HHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA