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The map label for this gene is yagI [H]

Identifier: 238028026

GI number: 238028026

Start: 2809374

End: 2810183

Strand: Direct

Name: yagI [H]

Synonym: bglu_1g24760

Alternate gene names: 238028026

Gene position: 2809374-2810183 (Clockwise)

Preceding gene: 238028013

Following gene: 238028028

Centisome position: 71.92

GC content: 68.52

Gene sequence:

>810_bases
ATGAGCACGCCGAATCCTGACCCGAAGACGTCGATCCAGGTGATCGAACGCATGATGCGACTGCTCGATGCGCTCGCCGA
CCACAGTGACCCGGTCAGCCTGAAGGAGCTCGCGCAGCGCACGGAACTGCATCCCTCCACCGCGCACCGGATTCTCAACG
ACATGGTGACGTGCCGTCTGGTCGACCGCTCGGACCCCGGCACCTATCGCCTCGGCATGCGGCTGCTGGAACTCGGCAAC
CTCGTCAAGGCGCGGCTGTCGGTGCGCGACGCGGCGCTCATGCCGATGCGCGAACTGCACCGGCTGACGGGGCAGACCGT
GAACCTGTCGGTGCGCCAGGGCGACGAGATCGTCTACATCGAGCGTGCCTATTCGGAGCGCTCGGGCATGCAGGTGGTGC
GCGCCATCGGCGGCCGCGCGCCGCTGCACCTGACCTCGGTCGGCAAGCTGTTCCTGGCGGCCGACGAAACCACGCGCGTG
CGCGCCTACGCAACGCGCACCGGACTCGCCGGCCACACGCAGAACAGCATCACCGATCTGATGAAGCTCGAGCGCGAGCT
AGCGCTGGTGCGCCAGCAGGCCTGCGCGCGTGACAACGAGGAGCTCGAACTGGGCGTGCGCTGCATCGCGGCCGGCATCT
ACGACGATTCGGGCAAGCTCGTCGCCGGGCTGTCGCTGTCGGCCCCGGCCGATCGGCTGCAGGACGCCTGGCTCGGCCAG
ATCAGCCATACCGCGCTGACCATCTCCGAGGCGCTTGGCTACCGGCCGCCGCGCGAGAATTCGGGCGAGGCGCTCGCCAA
GTCGCTCTGA

Upstream 100 bases:

>100_bases
CCGATTCGATCTGAAGGTCTCCTCGAACAGCGTTCGCTTTTTTCACATTACGAGATACAATCGCTTCCTCACCGTTTGAC
AGGTCAACTGATTTTTCACG

Downstream 100 bases:

>100_bases
CGCGAGCCGCGCGGCACGGCCGGGGCGACGCCATCGGGCTCCGCGCTTTTCTGCCCGCCCATTGAAAAACCCCGCAGTCG
CGGGGTTTTTTCTTGTCGGC

Product: IclR regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSTPNPDPKTSIQVIERMMRLLDALADHSDPVSLKELAQRTELHPSTAHRILNDMVTCRLVDRSDPGTYRLGMRLLELGN
LVKARLSVRDAALMPMRELHRLTGQTVNLSVRQGDEIVYIERAYSERSGMQVVRAIGGRAPLHLTSVGKLFLAADETTRV
RAYATRTGLAGHTQNSITDLMKLERELALVRQQACARDNEELELGVRCIAAGIYDDSGKLVAGLSLSAPADRLQDAWLGQ
ISHTALTISEALGYRPPRENSGEALAKSL

Sequences:

>Translated_269_residues
MSTPNPDPKTSIQVIERMMRLLDALADHSDPVSLKELAQRTELHPSTAHRILNDMVTCRLVDRSDPGTYRLGMRLLELGN
LVKARLSVRDAALMPMRELHRLTGQTVNLSVRQGDEIVYIERAYSERSGMQVVRAIGGRAPLHLTSVGKLFLAADETTRV
RAYATRTGLAGHTQNSITDLMKLERELALVRQQACARDNEELELGVRCIAAGIYDDSGKLVAGLSLSAPADRLQDAWLGQ
ISHTALTISEALGYRPPRENSGEALAKSL
>Mature_268_residues
STPNPDPKTSIQVIERMMRLLDALADHSDPVSLKELAQRTELHPSTAHRILNDMVTCRLVDRSDPGTYRLGMRLLELGNL
VKARLSVRDAALMPMRELHRLTGQTVNLSVRQGDEIVYIERAYSERSGMQVVRAIGGRAPLHLTSVGKLFLAADETTRVR
AYATRTGLAGHTQNSITDLMKLERELALVRQQACARDNEELELGVRCIAAGIYDDSGKLVAGLSLSAPADRLQDAWLGQI
SHTALTISEALGYRPPRENSGEALAKSL

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1786468, Length=253, Percent_Identity=33.201581027668, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1788131, Length=256, Percent_Identity=32.8125, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1789999, Length=250, Percent_Identity=30.4, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1786715, Length=255, Percent_Identity=30.1960784313725, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI87082359, Length=230, Percent_Identity=32.1739130434783, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1790752, Length=233, Percent_Identity=27.4678111587983, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1788581, Length=255, Percent_Identity=25.4901960784314, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 29601; Mature: 29470

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPNPDPKTSIQVIERMMRLLDALADHSDPVSLKELAQRTELHPSTAHRILNDMVTCRL
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHEEEE
VDRSDPGTYRLGMRLLELGNLVKARLSVRDAALMPMRELHRLTGQTVNLSVRQGDEIVYI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEEECCCEEEEE
ERAYSERSGMQVVRAIGGRAPLHLTSVGKLFLAADETTRVRAYATRTGLAGHTQNSITDL
EEHHCHHHHHHHHHHHCCCCCEEHHHHCCEEEECCCCHHEEEHHHHCCCCCCCHHHHHHH
MKLERELALVRQQACARDNEELELGVRCIAAGIYDDSGKLVAGLSLSAPADRLQDAWLGQ
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECEECCCCCEEEEEECCCCHHHHHHHHHHH
ISHTALTISEALGYRPPRENSGEALAKSL
HHHHHHHHHHHHCCCCCCCCCCHHHHHCC
>Mature Secondary Structure 
STPNPDPKTSIQVIERMMRLLDALADHSDPVSLKELAQRTELHPSTAHRILNDMVTCRL
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHEEEE
VDRSDPGTYRLGMRLLELGNLVKARLSVRDAALMPMRELHRLTGQTVNLSVRQGDEIVYI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEEECCCEEEEE
ERAYSERSGMQVVRAIGGRAPLHLTSVGKLFLAADETTRVRAYATRTGLAGHTQNSITDL
EEHHCHHHHHHHHHHHCCCCCEEHHHHCCEEEECCCCHHEEEHHHHCCCCCCCHHHHHHH
MKLERELALVRQQACARDNEELELGVRCIAAGIYDDSGKLVAGLSLSAPADRLQDAWLGQ
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECEECCCCCEEEEEECCCCHHHHHHHHHHH
ISHTALTISEALGYRPPRENSGEALAKSL
HHHHHHHHHHHHCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]