| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028028
Identifier: 238028028
GI number: 238028028
Start: 2812121
End: 2812702
Strand: Direct
Name: 238028028
Synonym: bglu_1g24780
Alternate gene names: NA
Gene position: 2812121-2812702 (Clockwise)
Preceding gene: 238028026
Following gene: 238028032
Centisome position: 71.99
GC content: 65.64
Gene sequence:
>582_bases ATGTCCCTGTTGACCCCCGAGCAAATCGCCGCTGCCCACAAAGCCAATCTCGAAAGCCTGTTCGGCCTGACGTCGAAGGC GTTCGAAAGCGTCGAGAAGCTGATCGAGCTGAACGTGCAGGTTGTGAAGTCGACGCTCGCGGAAAGCCAGGAAAACGCGC AGCGCGCGCTGTCGGCCAAGGACGCGCAGGAACTGATCGCGCTGCAGGCAAGCTTTGCCCAGCCGGTGGCCGAGAAGATG CTGGCCTACGGCCGTCACCTGTACGACATCGCCTCGACCACGCAGGCCGAATTCGCGAAGGTTGCCGAAGCCCAGTTCCA GGAGCAGAACCTGAAGGTGCAGGCGCTCGTCGACAACGTCGCGAAGAACGCGCCGGCCGGCTCGGAAACGGCCGTTGCCG CACTGAAGTCGGCCATCAACGCCGCGAACACGACCTACGAAACGGTGCAGAAGGCCACCAAGCAGGCCGTCGAGATCGCC GAGTCGAACTTCAACGCCGCCGCCGCCGTCGCGACCAAGGCCGCCAACTCGGCTGCCGCTGCCTCGCGCCGCACGGCCGC CGCCGCGCCGAAGGCCGTCTGA
Upstream 100 bases:
>100_bases TGCAATGCACCACGGCATTGCGCAGATTCCGAACACCGTCGTGCCCCTTAACTCAAGCGATCGCCGCGAAGCCGGCGATC GTCAATCAGGAGCCAAAATC
Downstream 100 bases:
>100_bases GCCGGCGCATCCGCCCGCCAGCACAAACCCAACCGGATCGCGCGCCGCGCTCAGGCGCGCCGCTCCCCGAAAAACCGCGC CGCTGCGCGGTTTTTTTTCG
Product: Phasin-like protein
Products: NA
Alternate protein names: Phasin; Granule-Associated Protein; Polyhydroxybutyrate Granule-Associated Protein Phasin; Phasin Family Protein Protein; Phasin-Like Protein; Phasin Protein; Polyhydroxybutyrate Granule-Associated Protein PhaP; Phasin PhaP; Polyhydroxybutyrate Granule-Associated Protein Phap; Phasin Family Domain-Containing Protein; Related Granule-Associated Proteins; Granule-Associated Protein Phasin
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSLLTPEQIAAAHKANLESLFGLTSKAFESVEKLIELNVQVVKSTLAESQENAQRALSAKDAQELIALQASFAQPVAEKM LAYGRHLYDIASTTQAEFAKVAEAQFQEQNLKVQALVDNVAKNAPAGSETAVAALKSAINAANTTYETVQKATKQAVEIA ESNFNAAAAVATKAANSAAAASRRTAAAAPKAV
Sequences:
>Translated_193_residues MSLLTPEQIAAAHKANLESLFGLTSKAFESVEKLIELNVQVVKSTLAESQENAQRALSAKDAQELIALQASFAQPVAEKM LAYGRHLYDIASTTQAEFAKVAEAQFQEQNLKVQALVDNVAKNAPAGSETAVAALKSAINAANTTYETVQKATKQAVEIA ESNFNAAAAVATKAANSAAAASRRTAAAAPKAV >Mature_192_residues SLLTPEQIAAAHKANLESLFGLTSKAFESVEKLIELNVQVVKSTLAESQENAQRALSAKDAQELIALQASFAQPVAEKML AYGRHLYDIASTTQAEFAKVAEAQFQEQNLKVQALVDNVAKNAPAGSETAVAALKSAINAANTTYETVQKATKQAVEIAE SNFNAAAAVATKAANSAAAASRRTAAAAPKAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20159; Mature: 20028
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLTPEQIAAAHKANLESLFGLTSKAFESVEKLIELNVQVVKSTLAESQENAQRALSAK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAQELIALQASFAQPVAEKMLAYGRHLYDIASTTQAEFAKVAEAQFQEQNLKVQALVDNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AKNAPAGSETAVAALKSAINAANTTYETVQKATKQAVEIAESNFNAAAAVATKAANSAAA HHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ASRRTAAAAPKAV HHHHHHHCCCCCC >Mature Secondary Structure SLLTPEQIAAAHKANLESLFGLTSKAFESVEKLIELNVQVVKSTLAESQENAQRALSAK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAQELIALQASFAQPVAEKMLAYGRHLYDIASTTQAEFAKVAEAQFQEQNLKVQALVDNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AKNAPAGSETAVAALKSAINAANTTYETVQKATKQAVEIAESNFNAAAAVATKAANSAAA HHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ASRRTAAAAPKAV HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA