| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is pyrG [H]
Identifier: 238028004
GI number: 238028004
Start: 2784103
End: 2785764
Strand: Reverse
Name: pyrG [H]
Synonym: bglu_1g24530
Alternate gene names: 238028004
Gene position: 2785764-2784103 (Counterclockwise)
Preceding gene: 238028005
Following gene: 238028003
Centisome position: 71.31
GC content: 65.04
Gene sequence:
>1662_bases ATGACCAAATATGTTTTCGTCACCGGCGGCGTAGTGTCTTCACTCGGCAAGGGTATTGCCGCCGCTTCTCTCGCCGCGAT CCTCGAATCGCGCGGTCTCAAAGTCACCCTCCTCAAGCTCGATCCGTACATCAACGTCGACCCCGGCACGATGAGCCCGT TCCAGCACGGCGAAGTGTTCGTGACGGAGGACGGCGCGGAGACGGACCTCGACCTCGGCCACTACGAGCGCTTCATCAGC ACCAAGATGCGCAAGGCCAACAACTTCACGACCGGCCAGATCTACGAGTCGGTGATCCGCAAGGAGCGCCGCGGCGACTA CCTGGGCAAGACGGTCCAGGTGATTCCGCACATCACGAACGAGATCCAGGCGTTCATCGAGCGCGGGGCCGCGTCGGCGA CCTGCGGCGAGCCCGACGTGGCGATCGTCGAGATCGGCGGCACGGTCGGTGACATCGAATCGCTGCCGTTCCTCGAAGCC GCGCGCCAGATGAGCCTGCGCATGGGCCGCAACAGCGCCTGCTTCGTCCACCTGACGCTGGTGCCGTACATTGCCACGGC GGGCGAACTGAAGACCAAGCCGACCCAGCACAGCGTGCAGAAGCTGCGCGAGATCGGCATTCTGCCGCACGTGCTGCTGT GCCGTGCGGACCGCCGCATTCCCGACGACGAGTCCAAGAAGATCTCGCTGTTCTCGAACGTGCCGGAAGATGCCGTGATC TCGGTATGGGACGTCGACAGCATCTACAAGATTCCGCAGATGCTGCACGACCAGGGCCTCGACAAGATCATCTGCGAGGA ACTGAAGCTTTCGGCGCAGGACGCCGACCTGAGCATGTGGTCGGGCCTCGTCCACAAGCTCGAGAATCCGAAGCACGAAG TGACGATCGGCATGGTCGGCAAGTACGTCGAGCTGACCGAATCGTACAAGTCGCTGATCGAGGCGCTGCGCCACGCGTCG ATCCACACCTCGACGAAGGTCAACATCCAGTACCTCGACTCCGAGGAGATCGAGGCGAACGGCGTCGACAGCCTCAAGCA CCTCGACGCGGTGCTGGTGCCGGGCGGCTTCGGCCGGCGCGGCACGGAAGGCAAGATCGCGGCGATCCGCTACGCGCGCG AGGCGAAGGTGCCGTACCTCGGCATCTGTCTCGGCATGCAGCTCGCCGTGATCGAATTCGCGCGCGACGTGGTCGGCCTC GCCGACGCGAACAGCACCGAGTTCGATCCGAACACGCCGAACCGCGTGGTCGCGCTGATCACCGAGTGGTACGACCGCGA AGGCAAGGTCGAGAAGCGCACCGAGGCATCGGACCTGGGCGGCACCATGCGGCTCGGTTCGCAGCGCTGCCCGATCAAGG CCGGCACGCTCGCGCAGGAAATCTACGGCGCCGACGTCAACGAGCGCCACCGCCACCGCTACGAGGTGAACAACCGCTTC GTGCCGCAGCTCGAAGCGGGCGGCCTCGTGATCAGCGCGCGCACGCCGAGCGAGGATCTGCCGGAAATGATGGAGCTGCC GCGCTCGATGCACCCGTGGTTCGTCGGCGTGCAGTTCCACCCGGAATTCACCTCCACGCCGCGCGACGGCCATCCCCTCT TCAAGTCGTTCGTCGAAGCCGCGCTGGCCGGCCAGCAGGCGCGTGCCGGAGGGAAAGCATGA
Upstream 100 bases:
>100_bases TGCGCCCTCGGTGCGTGAGGATAGGGTGGGATCGGCCCACAATTGCTGAGGGATGCGCGGCCTTTACGGTATAATCCGTT TTTCCCGCGAGCATCCTGCG
Downstream 100 bases:
>100_bases AACTGGGCGATTTCGAAGTCGGCCTCGACCGGCCGTTGTTCCTGATCGCCGGCACCTGCGTGGTCGAATCGGAGCAGATG ACGATCGACACGGCGGGCCG
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MTKYVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFIS TKMRKANNFTTGQIYESVIRKERRGDYLGKTVQVIPHITNEIQAFIERGAASATCGEPDVAIVEIGGTVGDIESLPFLEA ARQMSLRMGRNSACFVHLTLVPYIATAGELKTKPTQHSVQKLREIGILPHVLLCRADRRIPDDESKKISLFSNVPEDAVI SVWDVDSIYKIPQMLHDQGLDKIICEELKLSAQDADLSMWSGLVHKLENPKHEVTIGMVGKYVELTESYKSLIEALRHAS IHTSTKVNIQYLDSEEIEANGVDSLKHLDAVLVPGGFGRRGTEGKIAAIRYAREAKVPYLGICLGMQLAVIEFARDVVGL ADANSTEFDPNTPNRVVALITEWYDREGKVEKRTEASDLGGTMRLGSQRCPIKAGTLAQEIYGADVNERHRHRYEVNNRF VPQLEAGGLVISARTPSEDLPEMMELPRSMHPWFVGVQFHPEFTSTPRDGHPLFKSFVEAALAGQQARAGGKA
Sequences:
>Translated_553_residues MTKYVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFIS TKMRKANNFTTGQIYESVIRKERRGDYLGKTVQVIPHITNEIQAFIERGAASATCGEPDVAIVEIGGTVGDIESLPFLEA ARQMSLRMGRNSACFVHLTLVPYIATAGELKTKPTQHSVQKLREIGILPHVLLCRADRRIPDDESKKISLFSNVPEDAVI SVWDVDSIYKIPQMLHDQGLDKIICEELKLSAQDADLSMWSGLVHKLENPKHEVTIGMVGKYVELTESYKSLIEALRHAS IHTSTKVNIQYLDSEEIEANGVDSLKHLDAVLVPGGFGRRGTEGKIAAIRYAREAKVPYLGICLGMQLAVIEFARDVVGL ADANSTEFDPNTPNRVVALITEWYDREGKVEKRTEASDLGGTMRLGSQRCPIKAGTLAQEIYGADVNERHRHRYEVNNRF VPQLEAGGLVISARTPSEDLPEMMELPRSMHPWFVGVQFHPEFTSTPRDGHPLFKSFVEAALAGQQARAGGKA >Mature_552_residues TKYVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFIST KMRKANNFTTGQIYESVIRKERRGDYLGKTVQVIPHITNEIQAFIERGAASATCGEPDVAIVEIGGTVGDIESLPFLEAA RQMSLRMGRNSACFVHLTLVPYIATAGELKTKPTQHSVQKLREIGILPHVLLCRADRRIPDDESKKISLFSNVPEDAVIS VWDVDSIYKIPQMLHDQGLDKIICEELKLSAQDADLSMWSGLVHKLENPKHEVTIGMVGKYVELTESYKSLIEALRHASI HTSTKVNIQYLDSEEIEANGVDSLKHLDAVLVPGGFGRRGTEGKIAAIRYAREAKVPYLGICLGMQLAVIEFARDVVGLA DANSTEFDPNTPNRVVALITEWYDREGKVEKRTEASDLGGTMRLGSQRCPIKAGTLAQEIYGADVNERHRHRYEVNNRFV PQLEAGGLVISARTPSEDLPEMMELPRSMHPWFVGVQFHPEFTSTPRDGHPLFKSFVEAALAGQQARAGGKA
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI28559085, Length=565, Percent_Identity=44.6017699115044, Blast_Score=487, Evalue=1e-137, Organism=Homo sapiens, GI28559083, Length=565, Percent_Identity=44.6017699115044, Blast_Score=487, Evalue=1e-137, Organism=Homo sapiens, GI221316689, Length=565, Percent_Identity=44.6017699115044, Blast_Score=487, Evalue=1e-137, Organism=Homo sapiens, GI148491070, Length=561, Percent_Identity=45.2762923351159, Blast_Score=480, Evalue=1e-135, Organism=Escherichia coli, GI1789142, Length=549, Percent_Identity=62.8415300546448, Blast_Score=691, Evalue=0.0, Organism=Caenorhabditis elegans, GI25148299, Length=609, Percent_Identity=40.0656814449918, Blast_Score=427, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6319432, Length=581, Percent_Identity=41.6523235800344, Blast_Score=453, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6322563, Length=573, Percent_Identity=41.5357766143106, Blast_Score=442, Evalue=1e-125, Organism=Drosophila melanogaster, GI24664469, Length=560, Percent_Identity=45, Blast_Score=479, Evalue=1e-135, Organism=Drosophila melanogaster, GI21357815, Length=505, Percent_Identity=43.5643564356436, Blast_Score=406, Evalue=1e-113,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 60918; Mature: 60787
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVF CCEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFISTKMRKANNFTTGQIYESVIRKERRGDYLGKTVQVIPHITN EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHH EIQAFIERGAASATCGEPDVAIVEIGGTVGDIESLPFLEAARQMSLRMGRNSACFVHLTL HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEE VPYIATAGELKTKPTQHSVQKLREIGILPHVLLCRADRRIPDDESKKISLFSNVPEDAVI HHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEE SVWDVDSIYKIPQMLHDQGLDKIICEELKLSAQDADLSMWSGLVHKLENPKHEVTIGMVG EEECCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHH KYVELTESYKSLIEALRHASIHTSTKVNIQYLDSEEIEANGVDSLKHLDAVLVPGGFGRR HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCEEEECCCCCCC GTEGKIAAIRYAREAKVPYLGICLGMQLAVIEFARDVVGLADANSTEFDPNTPNRVVALI CCCCCEEEEEEHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEHH TEWYDREGKVEKRTEASDLGGTMRLGSQRCPIKAGTLAQEIYGADVNERHRHRYEVNNRF HHHHCCCCCCHHHCCHHHCCCEECCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCC VPQLEAGGLVISARTPSEDLPEMMELPRSMHPWFVGVQFHPEFTSTPRDGHPLFKSFVEA CCEECCCCEEEECCCCCCCHHHHHHCCHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH ALAGQQARAGGKA HHCCCHHCCCCCC >Mature Secondary Structure TKYVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVF CEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFISTKMRKANNFTTGQIYESVIRKERRGDYLGKTVQVIPHITN EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHH EIQAFIERGAASATCGEPDVAIVEIGGTVGDIESLPFLEAARQMSLRMGRNSACFVHLTL HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEE VPYIATAGELKTKPTQHSVQKLREIGILPHVLLCRADRRIPDDESKKISLFSNVPEDAVI HHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEE SVWDVDSIYKIPQMLHDQGLDKIICEELKLSAQDADLSMWSGLVHKLENPKHEVTIGMVG EEECCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHH KYVELTESYKSLIEALRHASIHTSTKVNIQYLDSEEIEANGVDSLKHLDAVLVPGGFGRR HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCEEEECCCCCCC GTEGKIAAIRYAREAKVPYLGICLGMQLAVIEFARDVVGLADANSTEFDPNTPNRVVALI CCCCCEEEEEEHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEHH TEWYDREGKVEKRTEASDLGGTMRLGSQRCPIKAGTLAQEIYGADVNERHRHRYEVNNRF HHHHCCCCCCHHHCCHHHCCCEECCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCC VPQLEAGGLVISARTPSEDLPEMMELPRSMHPWFVGVQFHPEFTSTPRDGHPLFKSFVEA CCEECCCCEEEECCCCCCCHHHHHHCCHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH ALAGQQARAGGKA HHCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA