| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028005
Identifier: 238028005
GI number: 238028005
Start: 2785955
End: 2786767
Strand: Reverse
Name: 238028005
Synonym: bglu_1g24540
Alternate gene names: NA
Gene position: 2786767-2785955 (Counterclockwise)
Preceding gene: 238028006
Following gene: 238028004
Centisome position: 71.34
GC content: 68.51
Gene sequence:
>813_bases TTGAAGGACATTCTCCATTTCTCGCATGCGAACGGCTTCCCCGCGTCGACTTACCGGACGCTGTTCGCCGAACTTGCCGA TCACTACGAGATCCGCCACCTTGAACGGATCGGCCACAACCGCCGCTACCCGGTCACGCGCGACTGGCCGCATCTCGTCG AGGAACTGCTCGACGAGGTCGGACGCCAGTACACGCAGCCGGTCTGGCTGGTGGGCCACTCGCTCGGCGGTTACCTGTCG CTGATGGCGGCGTTGAAGAAGCCGCAGTGGGTGAAGGGCGTGGTGATGCTCGATTCGCCGGTGATCGCCGGCTGGCGCAG CAGCCTGCTGCGCGTGAGCCAGTGGACGGGACTCGACGAGCGGCTCTCGCCTGCTGCCGCCACGCGCACGCGGCGCACCC ACTGGCCGAGCCGCGAGGCCGCCTGGAAGCACTTCCGCGAGAAGCCGGCCTTCGCGCGCTGGGATGAGCGCATGCTGGCC GACTACATCGACTACGGCATTCCGCAGTGCGGCCCGTCGGGCGAGCGGCGCCTCGCCTTCGAACGCGACATCGAATACAT GATCTACCGAACCCTGCCGCATACGCTCGGCGCGCGGCTCGCCCGCGGCGCGCCGGTGCCGGTCGGGTTCCTGGCCGGCA CGCGGTCGCGCGAAGTGAGGCAGGTGGGCCTCGATGCGACGCGCCGCATCACGCATGGCCGCATCGAGTGGCTCGAAGGC TCGCATCTGTTCCCGATGGAACGGCCGATCGAGACGGTCCGCGCCTTGCAGCGCATGCTCAATACGTTGCGCGCGGTGCA GGGCGGCGCGTGA
Upstream 100 bases:
>100_bases CCCCATGCCACGACCGGGCCGCCGGGACGCGCTATGCTCGCTGGCAACCGATCGTGCGGCCCCGCCGCGCACGACCACGC AAACAGGAGACCCCGCCGCC
Downstream 100 bases:
>100_bases GCCGCGCGGCGTGACGCGGCAGTGACACGGGCCTCACGCGGCGGGGCGTGCCGGCAGGCTGCCCGGCGCCGTTTGCGGCG GGGGCGGCGATGCGCCCTCG
Product: alpha/beta fold hydrolase
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Family Hydrolase; Hydrolases Or Acyltransferases; Hydrolase/Acyltransferase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Superfamily Hydrolase/Acyltransferase; Hydrolase Protein; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Family; Alpha/Beta Fold Hydrolase; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein; Conserved Hydrolases Or Acyltransferase
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MKDILHFSHANGFPASTYRTLFAELADHYEIRHLERIGHNRRYPVTRDWPHLVEELLDEVGRQYTQPVWLVGHSLGGYLS LMAALKKPQWVKGVVMLDSPVIAGWRSSLLRVSQWTGLDERLSPAAATRTRRTHWPSREAAWKHFREKPAFARWDERMLA DYIDYGIPQCGPSGERRLAFERDIEYMIYRTLPHTLGARLARGAPVPVGFLAGTRSREVRQVGLDATRRITHGRIEWLEG SHLFPMERPIETVRALQRMLNTLRAVQGGA
Sequences:
>Translated_270_residues MKDILHFSHANGFPASTYRTLFAELADHYEIRHLERIGHNRRYPVTRDWPHLVEELLDEVGRQYTQPVWLVGHSLGGYLS LMAALKKPQWVKGVVMLDSPVIAGWRSSLLRVSQWTGLDERLSPAAATRTRRTHWPSREAAWKHFREKPAFARWDERMLA DYIDYGIPQCGPSGERRLAFERDIEYMIYRTLPHTLGARLARGAPVPVGFLAGTRSREVRQVGLDATRRITHGRIEWLEG SHLFPMERPIETVRALQRMLNTLRAVQGGA >Mature_270_residues MKDILHFSHANGFPASTYRTLFAELADHYEIRHLERIGHNRRYPVTRDWPHLVEELLDEVGRQYTQPVWLVGHSLGGYLS LMAALKKPQWVKGVVMLDSPVIAGWRSSLLRVSQWTGLDERLSPAAATRTRRTHWPSREAAWKHFREKPAFARWDERMLA DYIDYGIPQCGPSGERRLAFERDIEYMIYRTLPHTLGARLARGAPVPVGFLAGTRSREVRQVGLDATRRITHGRIEWLEG SHLFPMERPIETVRALQRMLNTLRAVQGGA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31107; Mature: 31107
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDILHFSHANGFPASTYRTLFAELADHYEIRHLERIGHNRRYPVTRDWPHLVEELLDEV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH GRQYTQPVWLVGHSLGGYLSLMAALKKPQWVKGVVMLDSPVIAGWRSSLLRVSQWTGLDE HHHHCCCCEEEHHHHHHHHHHHHHHCCCCHHEEEEEECCCHHHHHHHHHHHHHHHCCCHH RLSPAAATRTRRTHWPSREAAWKHFREKPAFARWDERMLADYIDYGIPQCGPSGERRLAF HHCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH ERDIEYMIYRTLPHTLGARLARGAPVPVGFLAGTRSREVRQVGLDATRRITHGRIEWLEG HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHCCHHHHHHHCCHHEEECC SHLFPMERPIETVRALQRMLNTLRAVQGGA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKDILHFSHANGFPASTYRTLFAELADHYEIRHLERIGHNRRYPVTRDWPHLVEELLDEV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH GRQYTQPVWLVGHSLGGYLSLMAALKKPQWVKGVVMLDSPVIAGWRSSLLRVSQWTGLDE HHHHCCCCEEEHHHHHHHHHHHHHHCCCCHHEEEEEECCCHHHHHHHHHHHHHHHCCCHH RLSPAAATRTRRTHWPSREAAWKHFREKPAFARWDERMLADYIDYGIPQCGPSGERRLAF HHCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH ERDIEYMIYRTLPHTLGARLARGAPVPVGFLAGTRSREVRQVGLDATRRITHGRIEWLEG HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHCCHHHHHHHCCHHEEECC SHLFPMERPIETVRALQRMLNTLRAVQGGA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA