| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027989
Identifier: 238027989
GI number: 238027989
Start: 2770758
End: 2771903
Strand: Reverse
Name: 238027989
Synonym: bglu_1g24380
Alternate gene names: NA
Gene position: 2771903-2770758 (Counterclockwise)
Preceding gene: 238027990
Following gene: 238027988
Centisome position: 70.96
GC content: 68.94
Gene sequence:
>1146_bases ATGAAACATTTCGCCTTTTCCTCTCGCGCCTTCCAGGCGTCCGTGATGGCGCTCGCGCTCGGCGCGCTGGCCGGCTGCGA TACGCTGAACGATTATCTCGCGCCGGACCGGGTCAACTACAAGGCGACGGGCTCGGCGCCGCCGCTGGAAGTACCGAAGG ATCTGACCGCGGTGCCGGTCAACCCGTCCTACGTGGCGCCGCCCACCAATGCCGGCCTCGGCTCGCTGCCGCAGCGCGCC GTCACGGCGGCCGGTAACGCGACGGAAGGGCAGCCGAACGCGCAGGACCCGTTGGGCATGCACGTCGAGCGCGACGGCGA CCGCCGCTGGCTCGTCGTCGACGGCCGCACGCCCGAGCAGCTCTGGCCGCAGCTGAAGGAATTCTGGGTCGACAACGGCT TCGCGCTGAAGACCGACGCGCCGCAGACGGGCATCATGGCCACCGACTGGGCCGAGAACCGCGCGAATATCCCCGATGAC TGGTTCCGGCGCACCATCGGCCGCGTGATCGATTTCGCGTATTCGTCGGGCACGCGTGACAGCTTCCGCACGCTCGTCAC GCGCGGGCCGGACGGCTCGACCGACATCTCGATCACGCACAGCGCGATGGAGGAAGTGCTGACGGGGCCGCAGGGCGGCG ATTCCTCGCGCTGGGTCGAGCGGCCCCGCAACCCGGTGCTCGAGGCCGTGTTCCTCACCAAGCTGATGGAGAAGTTCGGG CTGACCGACGCGCAGGCCAAGCAGCTGCTGACCGATGCGCGCCCGGCGGCGGCACCGGCGAAGGTGGTCGACACGAGCTC GGGCGCGCCCACGCTCGATCTGGCCGAGTCGTTCGAGCGCGCCTGGCTGCGCGTGGGGCTCGCGCTCGACCGCACCAACT TCGCCGTCGACAACCGCGATCGTGCCAAGGGCATCTACATGGTCCGCTACGCGAATTCGGCCGAGGAACTGAAGCGCGAG GGCGTGTTCGGCAAGCTGTTCTTCGGCGGCCCGAGCGCGGCCAAGCCCGGCAAGGAGTTTTTCGTCAGCGTGCGCGCCAA TGGCGGTGCGCAAACGCGGGTCGCCGTGGTGGACGAGAACGGCCAGATCGACAACTCCGCCGACGCGCAGCGCATCATCA AGCTGCTGCACGCGCAGCTGAACTGA
Upstream 100 bases:
>100_bases GATCCGGGCGGCCGCGCCGCCCGGAGTTTCGATCCACTCCGACTCCTGTCCGGCCCGCCGGCATCGCGCGTCACCCGCGT TTAGCAAGACGAAGGATTTC
Downstream 100 bases:
>100_bases GCGCGTGAGATTCACGAGCCTCGGCAGCGGCAGCGAGGGCAACGCGCTCGTCGTCGAGGCCGCGTCGGGCACCACCACCA CGCGCGTGCTGCTCGACTGC
Product: NlpBDapX family lipoprotei
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MKHFAFSSRAFQASVMALALGALAGCDTLNDYLAPDRVNYKATGSAPPLEVPKDLTAVPVNPSYVAPPTNAGLGSLPQRA VTAAGNATEGQPNAQDPLGMHVERDGDRRWLVVDGRTPEQLWPQLKEFWVDNGFALKTDAPQTGIMATDWAENRANIPDD WFRRTIGRVIDFAYSSGTRDSFRTLVTRGPDGSTDISITHSAMEEVLTGPQGGDSSRWVERPRNPVLEAVFLTKLMEKFG LTDAQAKQLLTDARPAAAPAKVVDTSSGAPTLDLAESFERAWLRVGLALDRTNFAVDNRDRAKGIYMVRYANSAEELKRE GVFGKLFFGGPSAAKPGKEFFVSVRANGGAQTRVAVVDENGQIDNSADAQRIIKLLHAQLN
Sequences:
>Translated_381_residues MKHFAFSSRAFQASVMALALGALAGCDTLNDYLAPDRVNYKATGSAPPLEVPKDLTAVPVNPSYVAPPTNAGLGSLPQRA VTAAGNATEGQPNAQDPLGMHVERDGDRRWLVVDGRTPEQLWPQLKEFWVDNGFALKTDAPQTGIMATDWAENRANIPDD WFRRTIGRVIDFAYSSGTRDSFRTLVTRGPDGSTDISITHSAMEEVLTGPQGGDSSRWVERPRNPVLEAVFLTKLMEKFG LTDAQAKQLLTDARPAAAPAKVVDTSSGAPTLDLAESFERAWLRVGLALDRTNFAVDNRDRAKGIYMVRYANSAEELKRE GVFGKLFFGGPSAAKPGKEFFVSVRANGGAQTRVAVVDENGQIDNSADAQRIIKLLHAQLN >Mature_381_residues MKHFAFSSRAFQASVMALALGALAGCDTLNDYLAPDRVNYKATGSAPPLEVPKDLTAVPVNPSYVAPPTNAGLGSLPQRA VTAAGNATEGQPNAQDPLGMHVERDGDRRWLVVDGRTPEQLWPQLKEFWVDNGFALKTDAPQTGIMATDWAENRANIPDD WFRRTIGRVIDFAYSSGTRDSFRTLVTRGPDGSTDISITHSAMEEVLTGPQGGDSSRWVERPRNPVLEAVFLTKLMEKFG LTDAQAKQLLTDARPAAAPAKVVDTSSGAPTLDLAESFERAWLRVGLALDRTNFAVDNRDRAKGIYMVRYANSAEELKRE GVFGKLFFGGPSAAKPGKEFFVSVRANGGAQTRVAVVDENGQIDNSADAQRIIKLLHAQLN
Specific function: Unknown
COG id: COG3317
COG function: function code M; Uncharacterized lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41315; Mature: 41315
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHFAFSSRAFQASVMALALGALAGCDTLNDYLAPDRVNYKATGSAPPLEVPKDLTAVPV CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEECC NPSYVAPPTNAGLGSLPQRAVTAAGNATEGQPNAQDPLGMHVERDGDRRWLVVDGRTPEQ CCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCHHH LWPQLKEFWVDNGFALKTDAPQTGIMATDWAENRANIPDDWFRRTIGRVIDFAYSSGTRD HHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH SFRTLVTRGPDGSTDISITHSAMEEVLTGPQGGDSSRWVERPRNPVLEAVFLTKLMEKFG HHHHHHCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHC LTDAQAKQLLTDARPAAAPAKVVDTSSGAPTLDLAESFERAWLRVGLALDRTNFAVDNRD CCHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCEECCCC RAKGIYMVRYANSAEELKREGVFGKLFFGGPSAAKPGKEFFVSVRANGGAQTRVAVVDEN CCCCEEEEEECCCHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEECC GQIDNSADAQRIIKLLHAQLN CCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKHFAFSSRAFQASVMALALGALAGCDTLNDYLAPDRVNYKATGSAPPLEVPKDLTAVPV CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEECC NPSYVAPPTNAGLGSLPQRAVTAAGNATEGQPNAQDPLGMHVERDGDRRWLVVDGRTPEQ CCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCHHH LWPQLKEFWVDNGFALKTDAPQTGIMATDWAENRANIPDDWFRRTIGRVIDFAYSSGTRD HHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH SFRTLVTRGPDGSTDISITHSAMEEVLTGPQGGDSSRWVERPRNPVLEAVFLTKLMEKFG HHHHHHCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHC LTDAQAKQLLTDARPAAAPAKVVDTSSGAPTLDLAESFERAWLRVGLALDRTNFAVDNRD CCHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCEECCCC RAKGIYMVRYANSAEELKREGVFGKLFFGGPSAAKPGKEFFVSVRANGGAQTRVAVVDEN CCCCEEEEEECCCHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEECC GQIDNSADAQRIIKLLHAQLN CCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]