| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027983
Identifier: 238027983
GI number: 238027983
Start: 2761716
End: 2763422
Strand: Reverse
Name: 238027983
Synonym: bglu_1g24320
Alternate gene names: NA
Gene position: 2763422-2761716 (Counterclockwise)
Preceding gene: 238027986
Following gene: 238027982
Centisome position: 70.74
GC content: 63.44
Gene sequence:
>1707_bases ATGAAAATCGAGATCACAGCTACCATCGCCAGCGCGCTGCACATCGGCGTTCGACCCGAGGTCGGTGTGCCACCCGACAA GTGGCCAAAAAACCTGGATCGGCAGCCGTACGTGGTCACCGACGCCATCGGTCCGACCGGGTTCGGGATCAAGGTGACCG CGAGCAACGCGTCGTACATCGTTCAAAAGCGGGTGCGTACATCCGGGCCGGGCGCGGTGATTCGCGCGACCCTGGGCCGC GTCACGGAGATGACCGTTCAGCAGGCGCGCAAGAAAGCGCACGAGGTGCTGGATGGCATCGTCGAAACGGGACGGGCACC GGGCCCGGACAAACGCAACCGCGACGAACGGGATCTGACGCTGGGCGAAGCGTTGGACGTTTACAGACACGAACTGTTGC ACCGAAAGCGTCCAGCAACACCCGGTAGTTTAAAGTCTTACGACAAGGCCGTGCGAAAACTGGAGCGCTGGAAGAACAAA CGGATCAACGACCTCGTGGACGAAGAGATCGTCGATGCCTTCGACGCCCTCAACGCCAAGACGCCCACGACCGCAGAGCA GACGTTCCGATGGGCTAGCACGGCCGTGTCGTTCGCCATCGAGAAGGAAGCGCGCATGGCGCAGCGGCGGTCCGAGCGCC CGGTGTTGACGTACAACCCCTTCAACATCTTGAAGGACCGGTACCGCACGCGTCAGGAGTTGGAGAACCTCTATAAGGAG GTGGGGCGTCGCCGCCCGCTCACGTTGAACGAGAGCCTGGGCCCGTGGCTCAAAGGCATTTACGGTCGGCGCAAGGAAAA CCGCACCGGTTGCGATTACCTGTTATTGGCGACCCTCTGGGGGTGCAGGTCGCAGGAATGCTCCGACCTCATGTGGCTGG ACCAGATCACGCCCGAGGAAGCGGCGCGCGCCTCGTTCGTCAACATGGACGAGGGCTACGTGATGATGAGGGATACCAAG AACCATCTGGATCACGTCATACCGCTGTGCCGAGGCGCTCGCAAGATCCTCGAGGAGCGGTTGGACATCCGCAATCGGGA GGCGGAGGCGGACCTGGACACGTTCCGTCGGGCGTCCCGCAAGCGTTGGGTGTTCCCGCCCCGATCCGTGTCGCGGTTGC GCAAGACCCCGCACTACAAGGACAGCAAGTCCCTGCGCGGGTACATCTGCCGCGACGTCGGGATCGTTCGGTGGGTGGTC AAGACCGACCCGGACGGTGAGCGCTTCCAGGTGCCGGTGGCGGCGCTGGGCATGCACGACCTGCGGCGGACCTTCGGTGG GGTGACCGACGCGTTGCACTACAGCGAGGACACCACCAAGAAGCTGCTAAATCACTTCACGAACGCCCGGTCGCAGACCG ATCAGCGCATCGAGAAGGCGCACGCGGTGACCCCGAACGTGGTTCGGACCTTACAGAACTCCCAGCCGCTGTCGGACGTG ACCGTGCGCTACACCATCCCGGACGCGGAGCGGCTGCGCGAGGCGATGCAAACGGTCGAGTCGACCATCCTGTCGACCTA CCCGCTGCTGTACAACATGCTGATCGCCACCTCGCCGGAGTACCCGCCGATGCCGATGTGGGAGCCCGCTGCCTTAAAAT GGCCGAAACCGAGGGCGGGCATCGAGGTCCGCGGCTTGGACACGATCACGGTGGACGACGAGGACGACACCGATACCGGC GACGAAGACGAGGAAGCAGCAGCATGA
Upstream 100 bases:
>100_bases AATAGCCCGCACCTGAAAGTATGCCGGGCGTATGCCAGTGTAATAGAATCGGCGTGCGAGGTCGTTTCTAGGCATACAGG CTCTTTCGGGCATACAAATC
Downstream 100 bases:
>100_bases TCAGTATCGAAATGCTGGACGATGAGGTGGCGGTCCGGCGTATGAACGTCGCGGCGTCGCTGCACGACGAACAGAGCGTG AGCGAGCCGGTGGCCGCCTT
Product: putative integrase
Products: NA
Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Integrase Family Protein; Phage Related Integrase; Integrase/Recombinase; Site-Specific Recombinase Phage Integrase Family Protein
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MKIEITATIASALHIGVRPEVGVPPDKWPKNLDRQPYVVTDAIGPTGFGIKVTASNASYIVQKRVRTSGPGAVIRATLGR VTEMTVQQARKKAHEVLDGIVETGRAPGPDKRNRDERDLTLGEALDVYRHELLHRKRPATPGSLKSYDKAVRKLERWKNK RINDLVDEEIVDAFDALNAKTPTTAEQTFRWASTAVSFAIEKEARMAQRRSERPVLTYNPFNILKDRYRTRQELENLYKE VGRRRPLTLNESLGPWLKGIYGRRKENRTGCDYLLLATLWGCRSQECSDLMWLDQITPEEAARASFVNMDEGYVMMRDTK NHLDHVIPLCRGARKILEERLDIRNREAEADLDTFRRASRKRWVFPPRSVSRLRKTPHYKDSKSLRGYICRDVGIVRWVV KTDPDGERFQVPVAALGMHDLRRTFGGVTDALHYSEDTTKKLLNHFTNARSQTDQRIEKAHAVTPNVVRTLQNSQPLSDV TVRYTIPDAERLREAMQTVESTILSTYPLLYNMLIATSPEYPPMPMWEPAALKWPKPRAGIEVRGLDTITVDDEDDTDTG DEDEEAAA
Sequences:
>Translated_568_residues MKIEITATIASALHIGVRPEVGVPPDKWPKNLDRQPYVVTDAIGPTGFGIKVTASNASYIVQKRVRTSGPGAVIRATLGR VTEMTVQQARKKAHEVLDGIVETGRAPGPDKRNRDERDLTLGEALDVYRHELLHRKRPATPGSLKSYDKAVRKLERWKNK RINDLVDEEIVDAFDALNAKTPTTAEQTFRWASTAVSFAIEKEARMAQRRSERPVLTYNPFNILKDRYRTRQELENLYKE VGRRRPLTLNESLGPWLKGIYGRRKENRTGCDYLLLATLWGCRSQECSDLMWLDQITPEEAARASFVNMDEGYVMMRDTK NHLDHVIPLCRGARKILEERLDIRNREAEADLDTFRRASRKRWVFPPRSVSRLRKTPHYKDSKSLRGYICRDVGIVRWVV KTDPDGERFQVPVAALGMHDLRRTFGGVTDALHYSEDTTKKLLNHFTNARSQTDQRIEKAHAVTPNVVRTLQNSQPLSDV TVRYTIPDAERLREAMQTVESTILSTYPLLYNMLIATSPEYPPMPMWEPAALKWPKPRAGIEVRGLDTITVDDEDDTDTG DEDEEAAA >Mature_568_residues MKIEITATIASALHIGVRPEVGVPPDKWPKNLDRQPYVVTDAIGPTGFGIKVTASNASYIVQKRVRTSGPGAVIRATLGR VTEMTVQQARKKAHEVLDGIVETGRAPGPDKRNRDERDLTLGEALDVYRHELLHRKRPATPGSLKSYDKAVRKLERWKNK RINDLVDEEIVDAFDALNAKTPTTAEQTFRWASTAVSFAIEKEARMAQRRSERPVLTYNPFNILKDRYRTRQELENLYKE VGRRRPLTLNESLGPWLKGIYGRRKENRTGCDYLLLATLWGCRSQECSDLMWLDQITPEEAARASFVNMDEGYVMMRDTK NHLDHVIPLCRGARKILEERLDIRNREAEADLDTFRRASRKRWVFPPRSVSRLRKTPHYKDSKSLRGYICRDVGIVRWVV KTDPDGERFQVPVAALGMHDLRRTFGGVTDALHYSEDTTKKLLNHFTNARSQTDQRIEKAHAVTPNVVRTLQNSQPLSDV TVRYTIPDAERLREAMQTVESTILSTYPLLYNMLIATSPEYPPMPMWEPAALKWPKPRAGIEVRGLDTITVDDEDDTDTG DEDEEAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64796; Mature: 64796
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIEITATIASALHIGVRPEVGVPPDKWPKNLDRQPYVVTDAIGPTGFGIKVTASNASYI CEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCHHHH VQKRVRTSGPGAVIRATLGRVTEMTVQQARKKAHEVLDGIVETGRAPGPDKRNRDERDLT HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH LGEALDVYRHELLHRKRPATPGSLKSYDKAVRKLERWKNKRINDLVDEEIVDAFDALNAK HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC TPTTAEQTFRWASTAVSFAIEKEARMAQRRSERPVLTYNPFNILKDRYRTRQELENLYKE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHH VGRRRPLTLNESLGPWLKGIYGRRKENRTGCDYLLLATLWGCRSQECSDLMWLDQITPEE HCCCCCCEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHH AARASFVNMDEGYVMMRDTKNHLDHVIPLCRGARKILEERLDIRNREAEADLDTFRRASR HHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHC KRWVFPPRSVSRLRKTPHYKDSKSLRGYICRDVGIVRWVVKTDPDGERFQVPVAALGMHD CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCEEECHHHHHHHHH LRRTFGGVTDALHYSEDTTKKLLNHFTNARSQTDQRIEKAHAVTPNVVRTLQNSQPLSDV HHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCE TVRYTIPDAERLREAMQTVESTILSTYPLLYNMLIATSPEYPPMPMWEPAALKWPKPRAG EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC IEVRGLDTITVDDEDDTDTGDEDEEAAA EEEECCEEEEECCCCCCCCCCCCHHCCC >Mature Secondary Structure MKIEITATIASALHIGVRPEVGVPPDKWPKNLDRQPYVVTDAIGPTGFGIKVTASNASYI CEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCHHHH VQKRVRTSGPGAVIRATLGRVTEMTVQQARKKAHEVLDGIVETGRAPGPDKRNRDERDLT HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH LGEALDVYRHELLHRKRPATPGSLKSYDKAVRKLERWKNKRINDLVDEEIVDAFDALNAK HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC TPTTAEQTFRWASTAVSFAIEKEARMAQRRSERPVLTYNPFNILKDRYRTRQELENLYKE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHH VGRRRPLTLNESLGPWLKGIYGRRKENRTGCDYLLLATLWGCRSQECSDLMWLDQITPEE HCCCCCCEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHH AARASFVNMDEGYVMMRDTKNHLDHVIPLCRGARKILEERLDIRNREAEADLDTFRRASR HHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHC KRWVFPPRSVSRLRKTPHYKDSKSLRGYICRDVGIVRWVVKTDPDGERFQVPVAALGMHD CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCEEECHHHHHHHHH LRRTFGGVTDALHYSEDTTKKLLNHFTNARSQTDQRIEKAHAVTPNVVRTLQNSQPLSDV HHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCE TVRYTIPDAERLREAMQTVESTILSTYPLLYNMLIATSPEYPPMPMWEPAALKWPKPRAG EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC IEVRGLDTITVDDEDDTDTGDEDEEAAA EEEECCEEEEECCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA