| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027982
Identifier: 238027982
GI number: 238027982
Start: 2761057
End: 2761719
Strand: Reverse
Name: 238027982
Synonym: bglu_1g24310
Alternate gene names: NA
Gene position: 2761719-2761057 (Counterclockwise)
Preceding gene: 238027983
Following gene: 238027980
Centisome position: 70.7
GC content: 67.42
Gene sequence:
>663_bases ATGATCAGTATCGAAATGCTGGACGATGAGGTGGCGGTCCGGCGTATGAACGTCGCGGCGTCGCTGCACGACGAACAGAG CGTGAGCGAGCCGGTGGCCGCCTTGTTCCTGGGGCGCTCCGCGCGCACGTTGGAACGTATGCGCAGCGAGGGGCGGGGAC CCGTCTACACCCAGGCGAAGCAGGAGGATGGACCCAAGCATACCGGCCGTAAGCCGTCGGTCACATACCTCATGCGGGAC CTGCGGGCCTGGCGCGAGAGCCACAAGGTCAGCAACCCACGCGAGGCAACGGTTCGCGATCGCGAGGCCCTGCGTTTCGA GACCATCGCGGACCTGCTCGACGATCAGCCGTGGTTCGCCAAGGCCGGCACCGACCAGTTGGTGGGGCACGCGTTGACCG GGCCGGAGGAACTGCTGGGCGAACGTCTCGACGACAAGTCGTTGGAGGTGGTTTGGCTCCCGATGCCAGAGGCCATGGCA CGACCCTGGCCCAACGTGCGGGAGCGCACACCGTTCCACGACGCGTACACCGAAGTGCTCGGCGAGGCCATGCGCCTCAG CCAGGTTCGGCAGGACGATGCGATCCTGCGGGCGGAGTTCGACGCGCTGGACGACGAGCGGGGCGAACCCCTGCCGGACG GGCCGGGACACAGACCCCTCTGA
Upstream 100 bases:
>100_bases CGAAACCGAGGGCGGGCATCGAGGTCCGCGGCTTGGACACGATCACGGTGGACGACGAGGACGACACCGATACCGGCGAC GAAGACGAGGAAGCAGCAGC
Downstream 100 bases:
>100_bases ACCCCGAACCCCAAACTCCGGATGCTTCAACGACCAACGCCCCAATCCTGGGGCGTTTTCACATCCGGCGCGGGCCCGGG GGCACCGCTCACGGGGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MISIEMLDDEVAVRRMNVAASLHDEQSVSEPVAALFLGRSARTLERMRSEGRGPVYTQAKQEDGPKHTGRKPSVTYLMRD LRAWRESHKVSNPREATVRDREALRFETIADLLDDQPWFAKAGTDQLVGHALTGPEELLGERLDDKSLEVVWLPMPEAMA RPWPNVRERTPFHDAYTEVLGEAMRLSQVRQDDAILRAEFDALDDERGEPLPDGPGHRPL
Sequences:
>Translated_220_residues MISIEMLDDEVAVRRMNVAASLHDEQSVSEPVAALFLGRSARTLERMRSEGRGPVYTQAKQEDGPKHTGRKPSVTYLMRD LRAWRESHKVSNPREATVRDREALRFETIADLLDDQPWFAKAGTDQLVGHALTGPEELLGERLDDKSLEVVWLPMPEAMA RPWPNVRERTPFHDAYTEVLGEAMRLSQVRQDDAILRAEFDALDDERGEPLPDGPGHRPL >Mature_220_residues MISIEMLDDEVAVRRMNVAASLHDEQSVSEPVAALFLGRSARTLERMRSEGRGPVYTQAKQEDGPKHTGRKPSVTYLMRD LRAWRESHKVSNPREATVRDREALRFETIADLLDDQPWFAKAGTDQLVGHALTGPEELLGERLDDKSLEVVWLPMPEAMA RPWPNVRERTPFHDAYTEVLGEAMRLSQVRQDDAILRAEFDALDDERGEPLPDGPGHRPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24944; Mature: 24944
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISIEMLDDEVAVRRMNVAASLHDEQSVSEPVAALFLGRSARTLERMRSEGRGPVYTQAK CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEECCC QEDGPKHTGRKPSVTYLMRDLRAWRESHKVSNPREATVRDREALRFETIADLLDDQPWFA CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC KAGTDQLVGHALTGPEELLGERLDDKSLEVVWLPMPEAMARPWPNVRERTPFHDAYTEVL CCCHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCHHHHCCCCCCHHCCCCHHHHHHHH GEAMRLSQVRQDDAILRAEFDALDDERGEPLPDGPGHRPL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MISIEMLDDEVAVRRMNVAASLHDEQSVSEPVAALFLGRSARTLERMRSEGRGPVYTQAK CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEECCC QEDGPKHTGRKPSVTYLMRDLRAWRESHKVSNPREATVRDREALRFETIADLLDDQPWFA CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC KAGTDQLVGHALTGPEELLGERLDDKSLEVVWLPMPEAMARPWPNVRERTPFHDAYTEVL CCCHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCHHHHCCCCCCHHCCCCHHHHHHHH GEAMRLSQVRQDDAILRAEFDALDDERGEPLPDGPGHRPL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA