| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027968
Identifier: 238027968
GI number: 238027968
Start: 2709305
End: 2710561
Strand: Direct
Name: 238027968
Synonym: bglu_1g24140
Alternate gene names: NA
Gene position: 2709305-2710561 (Clockwise)
Preceding gene: 238027963
Following gene: 238027973
Centisome position: 69.35
GC content: 64.2
Gene sequence:
>1257_bases ATGCGCTCGTTGAACGACGCAAGCGCCTGGGCGCAGGCCCAAGGGATCATGACCAAGGATGAATGGGACGCGCGGGCCAA AATGGACGACTGGCCCACCGACATTCCCAAGTGCCCGCAGAGCGTCGTGGCCTACAAGGGGCAGTGGAAAGGTTTCAAGA GCTTCCTCGGCGTCTCCGCGTGGAGCGGCGGACTCTCCCGCCCTGAACTGGCGTTGAAACACGGGCTGCAGAGCGTCCTG GACCTGGTGCCCGGACAACGTGCCGTAGTCGACCCCGCGGATGGGGAGCGGGTCCTCTTCCTCGACCTGCTCGACCGATC GCGACGCCTGGCGATCGAATACGACGGGCGCCATTGGCACAAGGGCGAAGCTCCTTACGTGCGCGACGCCGAAAAATCCC TGCGCCTTACCGCGGCCGGATGGTCCGTCATCCGGGTTCGCGAGGCACCGCTTGCCCTCCTCAACCCCACGTGGGACGTT GCCGTCCAGCCGCCTCGTGGGAACTACTGGTCGGTGATCGAAGCCGTGCTGCGGCACATGGCAAGGCTGATCGCTGAGGG TCATCTGCAGGACGATGGCTTGTCCGAGAGGATCGACGAAGCGCTCAACGTGCCGTTGCCACCCGACGCCTTCCGCCACG TCGAGCCAGTGCCCAAGTGGTCGTACGTCGATGCGAAGGCCTGGGTCCAGCCCATGGGGATCAAAACCGAAGACGAATGG CGGATGCTGACGCGGAGCGGCCAACTTCTGCCGGAGATGCCAGGCAATCCGCCCAGTGCTTACCCTGACTTGTGGGAAGG CTGGGGAACGTTCCTGGGCACCGGGAATGTGTACAACGGCGACCGCGAGTTCTGCACCTTAGTCGAAGCGTCGATGTGGG CCCAAGCGCAGCGGGTCCGCTCCCAGCGAGCCTGGCAGGCGCTCGGTGATCGCCGACCGTCGAACATCCCGTCGAATCCC CAAACCATCTACAAATCCGAATGGCAGGGATGGGGACGCTTCCTGGGGACCGGCACCGTTGCCAACGACGAGCGCCGCTT TTGCGTGATGGCAGAAGCCTCCACCTGGGGAAGGGACCGAGGCATTTCGACGAAGAAGGAATGGAGCGCTCGAAACGATC GGCCGGCGCACATCCCGTCGAATCCCCAGAACATCTACAAGATCGAGTGGCGCGGCTGGGCTCACTTCCTCGGCACCGAT CACCCGCGAGCGAGCGATGTTGATACGGTGGCCGTCGACGGTCTCGTGACCGCCTGA
Upstream 100 bases:
>100_bases CACCCCCGGCCCACGACACCTGGGCCGAGGTTGACAGCCACTCGTGCCCTGCTAGGTACTGATTTTTACCTGCAGGAGAA AGACTGTGGCGAGAAAGACG
Downstream 100 bases:
>100_bases GCATTGCCCGACGCCCACGGAAACGCCCGGCTTCAGCCGGGCGTTTTGCATGCTGCACGAGCGTCAGCGGATCACTCGCC GTCAACGGTCGGCAGCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MRSLNDASAWAQAQGIMTKDEWDARAKMDDWPTDIPKCPQSVVAYKGQWKGFKSFLGVSAWSGGLSRPELALKHGLQSVL DLVPGQRAVVDPADGERVLFLDLLDRSRRLAIEYDGRHWHKGEAPYVRDAEKSLRLTAAGWSVIRVREAPLALLNPTWDV AVQPPRGNYWSVIEAVLRHMARLIAEGHLQDDGLSERIDEALNVPLPPDAFRHVEPVPKWSYVDAKAWVQPMGIKTEDEW RMLTRSGQLLPEMPGNPPSAYPDLWEGWGTFLGTGNVYNGDREFCTLVEASMWAQAQRVRSQRAWQALGDRRPSNIPSNP QTIYKSEWQGWGRFLGTGTVANDERRFCVMAEASTWGRDRGISTKKEWSARNDRPAHIPSNPQNIYKIEWRGWAHFLGTD HPRASDVDTVAVDGLVTA
Sequences:
>Translated_418_residues MRSLNDASAWAQAQGIMTKDEWDARAKMDDWPTDIPKCPQSVVAYKGQWKGFKSFLGVSAWSGGLSRPELALKHGLQSVL DLVPGQRAVVDPADGERVLFLDLLDRSRRLAIEYDGRHWHKGEAPYVRDAEKSLRLTAAGWSVIRVREAPLALLNPTWDV AVQPPRGNYWSVIEAVLRHMARLIAEGHLQDDGLSERIDEALNVPLPPDAFRHVEPVPKWSYVDAKAWVQPMGIKTEDEW RMLTRSGQLLPEMPGNPPSAYPDLWEGWGTFLGTGNVYNGDREFCTLVEASMWAQAQRVRSQRAWQALGDRRPSNIPSNP QTIYKSEWQGWGRFLGTGTVANDERRFCVMAEASTWGRDRGISTKKEWSARNDRPAHIPSNPQNIYKIEWRGWAHFLGTD HPRASDVDTVAVDGLVTA >Mature_418_residues MRSLNDASAWAQAQGIMTKDEWDARAKMDDWPTDIPKCPQSVVAYKGQWKGFKSFLGVSAWSGGLSRPELALKHGLQSVL DLVPGQRAVVDPADGERVLFLDLLDRSRRLAIEYDGRHWHKGEAPYVRDAEKSLRLTAAGWSVIRVREAPLALLNPTWDV AVQPPRGNYWSVIEAVLRHMARLIAEGHLQDDGLSERIDEALNVPLPPDAFRHVEPVPKWSYVDAKAWVQPMGIKTEDEW RMLTRSGQLLPEMPGNPPSAYPDLWEGWGTFLGTGNVYNGDREFCTLVEASMWAQAQRVRSQRAWQALGDRRPSNIPSNP QTIYKSEWQGWGRFLGTGTVANDERRFCVMAEASTWGRDRGISTKKEWSARNDRPAHIPSNPQNIYKIEWRGWAHFLGTD HPRASDVDTVAVDGLVTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47137; Mature: 47137
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLNDASAWAQAQGIMTKDEWDARAKMDDWPTDIPKCPQSVVAYKGQWKGFKSFLGVSA CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHH WSGGLSRPELALKHGLQSVLDLVPGQRAVVDPADGERVLFLDLLDRSRRLAIEYDGRHWH HCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCCEEEEEECCCCCC KGEAPYVRDAEKSLRLTAAGWSVIRVREAPLALLNPTWDVAVQPPRGNYWSVIEAVLRHM CCCCCCCCCHHHHEEEEECCCEEEEEECCCEEEECCCCCEEEECCCCCHHHHHHHHHHHH ARLIAEGHLQDDGLSERIDEALNVPLPPDAFRHVEPVPKWSYVDAKAWVQPMGIKTEDEW HHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCEECHHHHHCCCCCCCCHHH RMLTRSGQLLPEMPGNPPSAYPDLWEGWGTFLGTGNVYNGDREFCTLVEASMWAQAQRVR HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHH SQRAWQALGDRRPSNIPSNPQTIYKSEWQGWGRFLGTGTVANDERRFCVMAEASTWGRDR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCC GISTKKEWSARNDRPAHIPSNPQNIYKIEWRGWAHFLGTDHPRASDVDTVAVDGLVTA CCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCEEEECCEECC >Mature Secondary Structure MRSLNDASAWAQAQGIMTKDEWDARAKMDDWPTDIPKCPQSVVAYKGQWKGFKSFLGVSA CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHH WSGGLSRPELALKHGLQSVLDLVPGQRAVVDPADGERVLFLDLLDRSRRLAIEYDGRHWH HCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCCEEEEEECCCCCC KGEAPYVRDAEKSLRLTAAGWSVIRVREAPLALLNPTWDVAVQPPRGNYWSVIEAVLRHM CCCCCCCCCHHHHEEEEECCCEEEEEECCCEEEECCCCCEEEECCCCCHHHHHHHHHHHH ARLIAEGHLQDDGLSERIDEALNVPLPPDAFRHVEPVPKWSYVDAKAWVQPMGIKTEDEW HHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCEECHHHHHCCCCCCCCHHH RMLTRSGQLLPEMPGNPPSAYPDLWEGWGTFLGTGNVYNGDREFCTLVEASMWAQAQRVR HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHH SQRAWQALGDRRPSNIPSNPQTIYKSEWQGWGRFLGTGTVANDERRFCVMAEASTWGRDR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCC GISTKKEWSARNDRPAHIPSNPQNIYKIEWRGWAHFLGTDHPRASDVDTVAVDGLVTA CCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA