| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027959
Identifier: 238027959
GI number: 238027959
Start: 2687256
End: 2687777
Strand: Reverse
Name: 238027959
Synonym: bglu_1g24050
Alternate gene names: NA
Gene position: 2687777-2687256 (Counterclockwise)
Preceding gene: 238027960
Following gene: 238027956
Centisome position: 68.8
GC content: 58.81
Gene sequence:
>522_bases ATGACCACCCAGAAGACCTCCAAACGCGGCGAGTTCGACGCCAACTGGCCAGTGCCCGACGAATACCTGCTCGAACTCGG GCGCATGGTCTGCGTATGGGGCTCCCTCGAGTCGATGACGGCGGTCGCCATTTCGATGCTCGCAGGTTTTGAATCACCGA CGCATCCGGTGGCGCTCACGATGGTGGCGCACAGCAACTTTCAGCAGCGGGTGGACGCCATCAGTTCTCTCTGCGAACAA CTTGTGGACCAGGTTCCACACCTCAAAGACTATGAAGCCGTGATCAAGACGATCCGGGCAGCCCAGTCGGGAAGGAACAA GTACGCTCACAACGCGCTGTCTCTGGACGAGGATGGTCGCATTCACATCGCATACATGTCCGCACGCGGCACCTTCAAGA CGACCGTCGAGGTGGTGCGCGTGGCCGAGATCAAGGAAGTCAACGCGAAGATCCACGAAGCGGTTTGTGCGTTGCAGGCG CTCATCACCAACAAGCCGCTTAAGCCAATATGGGAGCGTTGA
Upstream 100 bases:
>100_bases CCATGCTGAACCACGACGAGGCCGTACTGATCGTCAGCCACATCGGTGGCCTTGTCCGTTTTCTCAAAACCATCGAAGCG AAGATCCAGGCAAACGAACA
Downstream 100 bases:
>100_bases GGCTCAGCAACGTCTTCGCCGCTGTCTGCGAAGGCGTTCCAGTTCGACGTGGAGCTGATGGTGCTTCGTTGCGATGCTGT GCAGCCGGATGTATTCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTTQKTSKRGEFDANWPVPDEYLLELGRMVCVWGSLESMTAVAISMLAGFESPTHPVALTMVAHSNFQQRVDAISSLCEQ LVDQVPHLKDYEAVIKTIRAAQSGRNKYAHNALSLDEDGRIHIAYMSARGTFKTTVEVVRVAEIKEVNAKIHEAVCALQA LITNKPLKPIWER
Sequences:
>Translated_173_residues MTTQKTSKRGEFDANWPVPDEYLLELGRMVCVWGSLESMTAVAISMLAGFESPTHPVALTMVAHSNFQQRVDAISSLCEQ LVDQVPHLKDYEAVIKTIRAAQSGRNKYAHNALSLDEDGRIHIAYMSARGTFKTTVEVVRVAEIKEVNAKIHEAVCALQA LITNKPLKPIWER >Mature_172_residues TTQKTSKRGEFDANWPVPDEYLLELGRMVCVWGSLESMTAVAISMLAGFESPTHPVALTMVAHSNFQQRVDAISSLCEQL VDQVPHLKDYEAVIKTIRAAQSGRNKYAHNALSLDEDGRIHIAYMSARGTFKTTVEVVRVAEIKEVNAKIHEAVCALQAL ITNKPLKPIWER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19292; Mature: 19161
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQKTSKRGEFDANWPVPDEYLLELGRMVCVWGSLESMTAVAISMLAGFESPTHPVALT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEE MVAHSNFQQRVDAISSLCEQLVDQVPHLKDYEAVIKTIRAAQSGRNKYAHNALSLDEDGR HHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC IHIAYMSARGTFKTTVEVVRVAEIKEVNAKIHEAVCALQALITNKPLKPIWER EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTQKTSKRGEFDANWPVPDEYLLELGRMVCVWGSLESMTAVAISMLAGFESPTHPVALT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEE MVAHSNFQQRVDAISSLCEQLVDQVPHLKDYEAVIKTIRAAQSGRNKYAHNALSLDEDGR HHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC IHIAYMSARGTFKTTVEVVRVAEIKEVNAKIHEAVCALQALITNKPLKPIWER EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA