| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027960
Identifier: 238027960
GI number: 238027960
Start: 2687774
End: 2688547
Strand: Reverse
Name: 238027960
Synonym: bglu_1g24060
Alternate gene names: NA
Gene position: 2688547-2687774 (Counterclockwise)
Preceding gene: 238027961
Following gene: 238027959
Centisome position: 68.82
GC content: 60.59
Gene sequence:
>774_bases ATGTCCACCCTGACCTCACGCGATCGTCGCTGCCTTGAGCCGTTCCTCGGCATGGGCAGCGGGTTCGTGCTGAACTTCTC CGACCGAACGATGGCCGAGTTTTTTCGGGAACAGCTTGGTCTGGACATCCACGATGAGAAGTACCAGTTCAAAGGCCCGT CCAAGGCCAAGCGCATGCGCGCCTTCTGGGAGCTGGAATCCGATCACACGGTCGCTCGGGCGCTCGACGCGCTGATCGAA TGGGGTGAGGAGTTTCGATGCTTGCCGGACGACCCGCAACAGCGGGCCGCCGTCGAAGCAATCATTGCCCGGCTGAAACT CAGCAGTCCGGTCCCCGAGGTTGATGCCTTTACGGCGAGCGTCAACGCGCTGGACTTCACCGCTGCGGCGAAGCACATTC GGGCCGCGATCGAGGCGAACGAGCCCGCCACGGCTTTGGATCGCGTGCACGTCTTCATGATGAAGTTCTTGCGGACGCTC TGCGAGCGACGCGGCATTGCCGTTACGCGCGAGAAACCGTTGCACAGCCTGATGGGTGAGTACGTGAAGCACCTGCGTGG CGCCGGCCATATCGAAAGCGAAATGACCGAGCGGATCCTCAAGACCAGCATCTCCACCCTGGAAGCGATGAACGCGGTGC GCAACGATCAAAGCCTGGCGCACGACAACCCCATGCTGAACCACGACGAGGCCGTACTGATCGTCAGCCACATCGGTGGC CTTGTCCGTTTTCTCAAAACCATCGAAGCGAAGATCCAGGCAAACGAACAATGA
Upstream 100 bases:
>100_bases GGTAGGTTCGATCCCCCGGCTTTCGACGTCGGTCTCGACGCGTACATCTACACGCGCCTTGTGTCCGGCCAGGAGTGACG AACTCGAAGAAGAGATCACG
Downstream 100 bases:
>100_bases CCACCCAGAAGACCTCCAAACGCGGCGAGTTCGACGCCAACTGGCCAGTGCCCGACGAATACCTGCTCGAACTCGGGCGC ATGGTCTGCGTATGGGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSTLTSRDRRCLEPFLGMGSGFVLNFSDRTMAEFFREQLGLDIHDEKYQFKGPSKAKRMRAFWELESDHTVARALDALIE WGEEFRCLPDDPQQRAAVEAIIARLKLSSPVPEVDAFTASVNALDFTAAAKHIRAAIEANEPATALDRVHVFMMKFLRTL CERRGIAVTREKPLHSLMGEYVKHLRGAGHIESEMTERILKTSISTLEAMNAVRNDQSLAHDNPMLNHDEAVLIVSHIGG LVRFLKTIEAKIQANEQ
Sequences:
>Translated_257_residues MSTLTSRDRRCLEPFLGMGSGFVLNFSDRTMAEFFREQLGLDIHDEKYQFKGPSKAKRMRAFWELESDHTVARALDALIE WGEEFRCLPDDPQQRAAVEAIIARLKLSSPVPEVDAFTASVNALDFTAAAKHIRAAIEANEPATALDRVHVFMMKFLRTL CERRGIAVTREKPLHSLMGEYVKHLRGAGHIESEMTERILKTSISTLEAMNAVRNDQSLAHDNPMLNHDEAVLIVSHIGG LVRFLKTIEAKIQANEQ >Mature_256_residues STLTSRDRRCLEPFLGMGSGFVLNFSDRTMAEFFREQLGLDIHDEKYQFKGPSKAKRMRAFWELESDHTVARALDALIEW GEEFRCLPDDPQQRAAVEAIIARLKLSSPVPEVDAFTASVNALDFTAAAKHIRAAIEANEPATALDRVHVFMMKFLRTLC ERRGIAVTREKPLHSLMGEYVKHLRGAGHIESEMTERILKTSISTLEAMNAVRNDQSLAHDNPMLNHDEAVLIVSHIGGL VRFLKTIEAKIQANEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28987; Mature: 28855
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLTSRDRRCLEPFLGMGSGFVLNFSDRTMAEFFREQLGLDIHDEKYQFKGPSKAKRMR CCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH AFWELESDHTVARALDALIEWGEEFRCLPDDPQQRAAVEAIIARLKLSSPVPEVDAFTAS HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH VNALDFTAAAKHIRAAIEANEPATALDRVHVFMMKFLRTLCERRGIAVTREKPLHSLMGE HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHH YVKHLRGAGHIESEMTERILKTSISTLEAMNAVRNDQSLAHDNPMLNHDEAVLIVSHIGG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHH LVRFLKTIEAKIQANEQ HHHHHHHHHHHHHCCCC >Mature Secondary Structure STLTSRDRRCLEPFLGMGSGFVLNFSDRTMAEFFREQLGLDIHDEKYQFKGPSKAKRMR CCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH AFWELESDHTVARALDALIEWGEEFRCLPDDPQQRAAVEAIIARLKLSSPVPEVDAFTAS HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH VNALDFTAAAKHIRAAIEANEPATALDRVHVFMMKFLRTLCERRGIAVTREKPLHSLMGE HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHH YVKHLRGAGHIESEMTERILKTSISTLEAMNAVRNDQSLAHDNPMLNHDEAVLIVSHIGG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHH LVRFLKTIEAKIQANEQ HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA