| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027958
Identifier: 238027958
GI number: 238027958
Start: 2685020
End: 2685805
Strand: Direct
Name: 238027958
Synonym: bglu_1g24040
Alternate gene names: NA
Gene position: 2685020-2685805 (Clockwise)
Preceding gene: 238027957
Following gene: 238027962
Centisome position: 68.73
GC content: 67.81
Gene sequence:
>786_bases GTGAAGCCACTGGGCCGCGAGACCAGCAACGCCGAGATCAAGCAGCTCCTGGCGCAGGACCACCCCGACCTGAACGAGGG GACGGTGAACTGCCAGATCTCGATTTGCACGGTGAACCGGGTCGGCCGCGTTGGCTACCCGGAGAACAAGAAGCCCCGCC TAGCCAACAGCCGGTACGACTTCCTGTTCGCCACCGGGCGCGGCAAGGTCGTCTGGTACGACCCGGACAAGCACGGCCTG TGGTCGATCGAGGAGACCCCCGAGGGGTTGAAGGTGCGCCGTGTCGACGACTCCACCGAGGAGGTGCCCGCCGCTCCGGA CATCGACGCCGCCGAGCCGGTGGACGATGGGTTCGGCGGTGGTGCGTTCGCCCTAGAAAGCCACCTGCGCGACTACCTAG CGCGCAACCCGCCCAGCACCACCGCGCACGGCCCGCTGACCCTGTTCGTCGACGCCGACGGACGCGACGGTGTGGAGTAC CAGACCGATTGCGGGCCCGCGGACCTGGTGTTCCTGGACCGCGATGGCAACTTCGTGGTGTTCGAGCTGAAACTGGGCCG GGGCCCGGACGCCGCGCTCGGTCAGGTGCAGCGCTACATGGGGTGGATCGAGCACCACGTGGCCCAGGGCAAGACCGTGT CCGGGGTGATCGTGGCGAACTCGATCAGCGACAAGCTCAAATACGCCGGCAAGGTCGCCCCGCGCGTTCAGCTCATGGAA TATCGGCTGAGCGTCGACCTGGCCCCGGTGGCGCTGACCGTGCCCGTTGCGGGAGGTCGCCCATGA
Upstream 100 bases:
>100_bases GGCCCCGACGCCTGGCGATACGACCAACGCGAGGACCCGAGCCGTGAGCACCGCCCCCACCACCCCACGCCCGCCGATCT GGCAACTCATCCGTGACGCC
Downstream 100 bases:
>100_bases TCGCGTGGTTGTCGCACGCCTGGACCGCGGCGGTGTCGTTCGTCGGGGACCTCAACGAAGGCGAGCTGCGGTTGCTGGCC GGCGCGGTGTCGGTGGTGAC
Product: RecB family-like nuclease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MKPLGRETSNAEIKQLLAQDHPDLNEGTVNCQISICTVNRVGRVGYPENKKPRLANSRYDFLFATGRGKVVWYDPDKHGL WSIEETPEGLKVRRVDDSTEEVPAAPDIDAAEPVDDGFGGGAFALESHLRDYLARNPPSTTAHGPLTLFVDADGRDGVEY QTDCGPADLVFLDRDGNFVVFELKLGRGPDAALGQVQRYMGWIEHHVAQGKTVSGVIVANSISDKLKYAGKVAPRVQLME YRLSVDLAPVALTVPVAGGRP
Sequences:
>Translated_261_residues MKPLGRETSNAEIKQLLAQDHPDLNEGTVNCQISICTVNRVGRVGYPENKKPRLANSRYDFLFATGRGKVVWYDPDKHGL WSIEETPEGLKVRRVDDSTEEVPAAPDIDAAEPVDDGFGGGAFALESHLRDYLARNPPSTTAHGPLTLFVDADGRDGVEY QTDCGPADLVFLDRDGNFVVFELKLGRGPDAALGQVQRYMGWIEHHVAQGKTVSGVIVANSISDKLKYAGKVAPRVQLME YRLSVDLAPVALTVPVAGGRP >Mature_261_residues MKPLGRETSNAEIKQLLAQDHPDLNEGTVNCQISICTVNRVGRVGYPENKKPRLANSRYDFLFATGRGKVVWYDPDKHGL WSIEETPEGLKVRRVDDSTEEVPAAPDIDAAEPVDDGFGGGAFALESHLRDYLARNPPSTTAHGPLTLFVDADGRDGVEY QTDCGPADLVFLDRDGNFVVFELKLGRGPDAALGQVQRYMGWIEHHVAQGKTVSGVIVANSISDKLKYAGKVAPRVQLME YRLSVDLAPVALTVPVAGGRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28422; Mature: 28422
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLGRETSNAEIKQLLAQDHPDLNEGTVNCQISICTVNRVGRVGYPENKKPRLANSRYD CCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEE FLFATGRGKVVWYDPDKHGLWSIEETPEGLKVRRVDDSTEEVPAAPDIDAAEPVDDGFGG EEEECCCCEEEEECCCCCCEEEECCCCCCCEEEECCCCHHHCCCCCCCCCCCCCCCCCCC GAFALESHLRDYLARNPPSTTAHGPLTLFVDADGRDGVEYQTDCGPADLVFLDRDGNFVV CHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCEEEEEEECCCCEEE FELKLGRGPDAALGQVQRYMGWIEHHVAQGKTVSGVIVANSISDKLKYAGKVAPRVQLME EEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCHHEEEE YRLSVDLAPVALTVPVAGGRP EEEECEEEEEEEEEECCCCCC >Mature Secondary Structure MKPLGRETSNAEIKQLLAQDHPDLNEGTVNCQISICTVNRVGRVGYPENKKPRLANSRYD CCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEE FLFATGRGKVVWYDPDKHGLWSIEETPEGLKVRRVDDSTEEVPAAPDIDAAEPVDDGFGG EEEECCCCEEEEECCCCCCEEEECCCCCCCEEEECCCCHHHCCCCCCCCCCCCCCCCCCC GAFALESHLRDYLARNPPSTTAHGPLTLFVDADGRDGVEYQTDCGPADLVFLDRDGNFVV CHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCEEEEEEECCCCEEE FELKLGRGPDAALGQVQRYMGWIEHHVAQGKTVSGVIVANSISDKLKYAGKVAPRVQLME EEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCHHEEEE YRLSVDLAPVALTVPVAGGRP EEEECEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA