| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027957
Identifier: 238027957
GI number: 238027957
Start: 2682138
End: 2684666
Strand: Direct
Name: 238027957
Synonym: bglu_1g24030
Alternate gene names: NA
Gene position: 2682138-2684666 (Clockwise)
Preceding gene: 238027949
Following gene: 238027958
Centisome position: 68.66
GC content: 69.55
Gene sequence:
>2529_bases GTGAAGACCTCCAACAACATCGGTCGTGATCTCGACCAGTTTTACACCAACCCCCAACTCGCTCAACGCCTGTTCGACGA GCTGATCGCCGAGCACCTCGGTGACCGCTGGTCGCACGGCGTGCGCTGGCTCGAGCCGTCGTGCGGCACGGGGGCGTTCC TGTCGCTGCTGCCCGAGGACGCCCTTGGGGTGGACCTCGATCCGAAGTGCGCGGGGGCCGTTCAGGCGGATTTCCTGAAC TGGACGCCGCCGGCCACCGCCGACGGTGACGATCGCCCGCTCGTGGTGGTGGGGAACCCGCCGTTCAAGCACGACGTGGC GTTCTTCAACCGCTGCGCCGAGCTGGGCGCCGAACGCATCGCGTTCATCGTCCCGCGCTCGTGGCAGAAGGCGTCGGTCC AGAACAAGCTCGCGCGCACGTTCCACCTCGCCCACGAGGAGGTTCTGCCGCTCGACGCGTTCGTGTTCGAGGGTCAGCCG GCCGAGGTGCCCACGGTCTTCCAGGTGTGGGAACGCCGCGACGAGCAGCGCGCGTTGATCGTGCTGCCCACCACGCACGC GGATTTCGCGTTCGTGCCGTACGCCCAGCGCGACACCGCCGACTTCGCGATCCAGCGCATCGGGGTGAACGCCGGCCGCG TGAAGGACCTCGCCGCCACGCACCTGAGCCAGAACTCCCACCGCTTCGTACGCGTGACCGACCGCAACCGCGTCGCCGAA GTCCGCGCCGTCTTCGAAGCGGTGGACTGGGCGCCCATCAAGGCGTGCGTCGCCGGGAACCCGAGCATCGCCAACGGCGA GATGGTCCAGGCCTACGAGACCGCCGTGGTCGACCCCCTGTTCGCCACCACCGACTGGTTCGGGGGCGTTGCCGATGCGG TGGACCAGCCGACCGCCGAGGAACCGGGCGTTGCTTCGCCGACCGAGCCGGTGGCGGCGCCTGCCGTCGCCCCCATGACC ATCCCGGCGGTGTACGAGCGCATCGCCGAGCTGGTCCGCGCGTCCGGGATGGACGCCCAGGGTCGCATGGTCGGCGGGGT CGTCTACACCCCGTTCGAGCTGGCGTCCTCGATGGTGAAGCTGGCCCGTCTGCAGCCCCACGAGACGGTGCTCGAACCGT CCTGCGGTCGCGGGTCGCTGGTGTTCGCGATCATCGCGGAATGGCTGGCCCGCGGATTCACGCACGAGCAGGTCGCGCGC TGGGCCGAGGCCAAGCTCTTCGTGGGCGATCTGGACGGTCAGGCGGTGGAGGACCTCCGCGCGCTCTACCGCTCGTATTT CGCCGAGCACGGGGTGACCACCGAGCTGAACGCCCGCGTCGGGGATGCCCTGTTCGACGGCTGGACCGGCACGTTCGACG TCACGATCGCCAACCCGCCCTACGTGGGGCTGGGCAAGCTGCCGAAGGATTACGCCAAGCGCGTGCGCGCGTCGTTCAGC ACCTGCGCGAAGGGAATGGCCGATATCTACCAGGCCTTCATCGAGCAGGCGCAAACCCAGTCGGACCGCTCGGTGGTGAT CGCCCCCAACGCATGGATGCGCACCAAGGCCGGGACGGCCCTGCGCAACCTGCTGCGCCCGCGTGTCCGCTCGGTGGTGG ACTTCGAGCACCGCCGCGTCTTCCTCGGGCCGCTGGGGGCGAGCGTACTGACCGCCATCGTGGTGACCGGCCCGGCTACC CAGGCGCCCGTGCTGTTCCGCACGGACATGCCGCACGAGAGCGACACCCCGTGGACCGTCGCGTTCCGCCAGAGCGACGA GGCGATGGGCCCGGCCGCGTGGGCGCTGGACCCGGCGATGCCCGGGGACGCGATCGACCCCGACGCCACCACGCTGGGCG ATCTGGCCGAGGTGTTGGTGGGGGTCAACACCAACGCCAACGAAGCGTACGAGGTGGAGAACTGGACGCTCGACGGTGGC GGGGTGCGTGCGACGAACCGCCACGGGCACGAGGTCCACCTCCCGATGAAGGACGCCCCGCTGTTCCTGAAGCTGACGAA GGTGAAGACTTTCGCCGACGTCGAGCGCGCCCACCGCATGCTCTGCCCGTACGACGCGGATCTGAAGGTGGTGCCCGAGG CGCAGCTCGCCCCCGAGGTGCTGAACTGGTTCCGCGACCACTCGGACCTGCTGCACGCACGCGACGGGGGCGACCTGCGC GGCTACGAGGCGTGGTACGCCTACGGGCGCAAGCAAGGGCTCTACACGTTCGACCCGACCGAGCGTCTGCTGCTGGTGCC GTGCATGGTGGACGGCCCGATGACGCCGATTGACGTGCCCCCCGGGCAACTCGGTGGGCGCTTCCTGTGGGCGTCGGGCT TCGTGGTGCGTGCGAAGAACCCGGCCGACCACCACCGGGTCAAGGAGCTGCTAGCAGCGTCGAGCACGTGGCGCTTCCTC TACCGTCGCGGCAAGCTGTGGACCGGGCGCTACCGGACTTTCACGCCGAACCAGCTCCGTCAGGTGCCGGAGGGCGTGAC GGTGACGCCGGTGGTGCAGCCGGTGAACATGGTGTCGGCGACGGTGTAG
Upstream 100 bases:
>100_bases CCGTGAGTCTTCACCGATATTCTCCGGTGCCCTGCTGTTGACTCACTCAAAAAGCAGCCGAACAAAAAAGTAGAGGTCCA CCCACTCCGGAGCGGACCTC
Downstream 100 bases:
>100_bases CCCAGCGGTTCGCCGGGCGCGGGGCTAAGGGGTGCAACGGCACCCCTCCTCCGTACGAGTCGACCGTGCCCCGTGCAAGA CCTCGGAGCGGGAGGCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Type II DNA Methylase Protein; Adenine-Specific DNA Methylase; N-6 DNA Methylase
Number of amino acids: Translated: 842; Mature: 842
Protein sequence:
>842_residues MKTSNNIGRDLDQFYTNPQLAQRLFDELIAEHLGDRWSHGVRWLEPSCGTGAFLSLLPEDALGVDLDPKCAGAVQADFLN WTPPATADGDDRPLVVVGNPPFKHDVAFFNRCAELGAERIAFIVPRSWQKASVQNKLARTFHLAHEEVLPLDAFVFEGQP AEVPTVFQVWERRDEQRALIVLPTTHADFAFVPYAQRDTADFAIQRIGVNAGRVKDLAATHLSQNSHRFVRVTDRNRVAE VRAVFEAVDWAPIKACVAGNPSIANGEMVQAYETAVVDPLFATTDWFGGVADAVDQPTAEEPGVASPTEPVAAPAVAPMT IPAVYERIAELVRASGMDAQGRMVGGVVYTPFELASSMVKLARLQPHETVLEPSCGRGSLVFAIIAEWLARGFTHEQVAR WAEAKLFVGDLDGQAVEDLRALYRSYFAEHGVTTELNARVGDALFDGWTGTFDVTIANPPYVGLGKLPKDYAKRVRASFS TCAKGMADIYQAFIEQAQTQSDRSVVIAPNAWMRTKAGTALRNLLRPRVRSVVDFEHRRVFLGPLGASVLTAIVVTGPAT QAPVLFRTDMPHESDTPWTVAFRQSDEAMGPAAWALDPAMPGDAIDPDATTLGDLAEVLVGVNTNANEAYEVENWTLDGG GVRATNRHGHEVHLPMKDAPLFLKLTKVKTFADVERAHRMLCPYDADLKVVPEAQLAPEVLNWFRDHSDLLHARDGGDLR GYEAWYAYGRKQGLYTFDPTERLLLVPCMVDGPMTPIDVPPGQLGGRFLWASGFVVRAKNPADHHRVKELLAASSTWRFL YRRGKLWTGRYRTFTPNQLRQVPEGVTVTPVVQPVNMVSATV
Sequences:
>Translated_842_residues MKTSNNIGRDLDQFYTNPQLAQRLFDELIAEHLGDRWSHGVRWLEPSCGTGAFLSLLPEDALGVDLDPKCAGAVQADFLN WTPPATADGDDRPLVVVGNPPFKHDVAFFNRCAELGAERIAFIVPRSWQKASVQNKLARTFHLAHEEVLPLDAFVFEGQP AEVPTVFQVWERRDEQRALIVLPTTHADFAFVPYAQRDTADFAIQRIGVNAGRVKDLAATHLSQNSHRFVRVTDRNRVAE VRAVFEAVDWAPIKACVAGNPSIANGEMVQAYETAVVDPLFATTDWFGGVADAVDQPTAEEPGVASPTEPVAAPAVAPMT IPAVYERIAELVRASGMDAQGRMVGGVVYTPFELASSMVKLARLQPHETVLEPSCGRGSLVFAIIAEWLARGFTHEQVAR WAEAKLFVGDLDGQAVEDLRALYRSYFAEHGVTTELNARVGDALFDGWTGTFDVTIANPPYVGLGKLPKDYAKRVRASFS TCAKGMADIYQAFIEQAQTQSDRSVVIAPNAWMRTKAGTALRNLLRPRVRSVVDFEHRRVFLGPLGASVLTAIVVTGPAT QAPVLFRTDMPHESDTPWTVAFRQSDEAMGPAAWALDPAMPGDAIDPDATTLGDLAEVLVGVNTNANEAYEVENWTLDGG GVRATNRHGHEVHLPMKDAPLFLKLTKVKTFADVERAHRMLCPYDADLKVVPEAQLAPEVLNWFRDHSDLLHARDGGDLR GYEAWYAYGRKQGLYTFDPTERLLLVPCMVDGPMTPIDVPPGQLGGRFLWASGFVVRAKNPADHHRVKELLAASSTWRFL YRRGKLWTGRYRTFTPNQLRQVPEGVTVTPVVQPVNMVSATV >Mature_842_residues MKTSNNIGRDLDQFYTNPQLAQRLFDELIAEHLGDRWSHGVRWLEPSCGTGAFLSLLPEDALGVDLDPKCAGAVQADFLN WTPPATADGDDRPLVVVGNPPFKHDVAFFNRCAELGAERIAFIVPRSWQKASVQNKLARTFHLAHEEVLPLDAFVFEGQP AEVPTVFQVWERRDEQRALIVLPTTHADFAFVPYAQRDTADFAIQRIGVNAGRVKDLAATHLSQNSHRFVRVTDRNRVAE VRAVFEAVDWAPIKACVAGNPSIANGEMVQAYETAVVDPLFATTDWFGGVADAVDQPTAEEPGVASPTEPVAAPAVAPMT IPAVYERIAELVRASGMDAQGRMVGGVVYTPFELASSMVKLARLQPHETVLEPSCGRGSLVFAIIAEWLARGFTHEQVAR WAEAKLFVGDLDGQAVEDLRALYRSYFAEHGVTTELNARVGDALFDGWTGTFDVTIANPPYVGLGKLPKDYAKRVRASFS TCAKGMADIYQAFIEQAQTQSDRSVVIAPNAWMRTKAGTALRNLLRPRVRSVVDFEHRRVFLGPLGASVLTAIVVTGPAT QAPVLFRTDMPHESDTPWTVAFRQSDEAMGPAAWALDPAMPGDAIDPDATTLGDLAEVLVGVNTNANEAYEVENWTLDGG GVRATNRHGHEVHLPMKDAPLFLKLTKVKTFADVERAHRMLCPYDADLKVVPEAQLAPEVLNWFRDHSDLLHARDGGDLR GYEAWYAYGRKQGLYTFDPTERLLLVPCMVDGPMTPIDVPPGQLGGRFLWASGFVVRAKNPADHHRVKELLAASSTWRFL YRRGKLWTGRYRTFTPNQLRQVPEGVTVTPVVQPVNMVSATV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92697; Mature: 92697
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSNNIGRDLDQFYTNPQLAQRLFDELIAEHLGDRWSHGVRWLEPSCGTGAFLSLLPED CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHCCCEEECCCCCCCHHHHHCCCC ALGVDLDPKCAGAVQADFLNWTPPATADGDDRPLVVVGNPPFKHDVAFFNRCAELGAERI CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCHHEE AFIVPRSWQKASVQNKLARTFHLAHEEVLPLDAFVFEGQPAEVPTVFQVWERRDEQRALI EEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHCCCCCCEEE VLPTTHADFAFVPYAQRDTADFAIQRIGVNAGRVKDLAATHLSQNSHRFVRVTDRNRVAE EEECCCCCEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHH VRAVFEAVDWAPIKACVAGNPSIANGEMVQAYETAVVDPLFATTDWFGGVADAVDQPTAE HHHHHHHHCCCHHHHEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHCCCCCC EPGVASPTEPVAAPAVAPMTIPAVYERIAELVRASGMDAQGRMVGGVVYTPFELASSMVK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCEEECHHHHHHHHHH LARLQPHETVLEPSCGRGSLVFAIIAEWLARGFTHEQVARWAEAKLFVGDLDGQAVEDLR HHHCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCEEEEECCCCHHHHHHH ALYRSYFAEHGVTTELNARVGDALFDGWTGTFDVTIANPPYVGLGKLPKDYAKRVRASFS HHHHHHHHHCCCCEEECCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH TCAKGMADIYQAFIEQAQTQSDRSVVIAPNAWMRTKAGTALRNLLRPRVRSVVDFEHRRV HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCEE FLGPLGASVLTAIVVTGPATQAPVLFRTDMPHESDTPWTVAFRQSDEAMGPAAWALDPAM EECCCCHHHHHHHHEECCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEECCCC PGDAIDPDATTLGDLAEVLVGVNTNANEAYEVENWTLDGGGVRATNRHGHEVHLPMKDAP CCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECEEEECCCCEEECCCCCCEEECCCCCCC LFLKLTKVKTFADVERAHRMLCPYDADLKVVPEAQLAPEVLNWFRDHSDLLHARDGGDLR EEEEEEHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHEECCCCCCCC GYEAWYAYGRKQGLYTFDPTERLLLVPCMVDGPMTPIDVPPGQLGGRFLWASGFVVRAKN CHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCEEEEECC PADHHRVKELLAASSTWRFLYRRGKLWTGRYRTFTPNQLRQVPEGVTVTPVVQPVNMVSA CHHHHHHHHHHHHHHHHHHHHHCCCEEECCEECCCHHHHHHCCCCCEEEHHHCCHHHHHC TV CC >Mature Secondary Structure MKTSNNIGRDLDQFYTNPQLAQRLFDELIAEHLGDRWSHGVRWLEPSCGTGAFLSLLPED CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHCCCEEECCCCCCCHHHHHCCCC ALGVDLDPKCAGAVQADFLNWTPPATADGDDRPLVVVGNPPFKHDVAFFNRCAELGAERI CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCHHEE AFIVPRSWQKASVQNKLARTFHLAHEEVLPLDAFVFEGQPAEVPTVFQVWERRDEQRALI EEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHCCCCCCEEE VLPTTHADFAFVPYAQRDTADFAIQRIGVNAGRVKDLAATHLSQNSHRFVRVTDRNRVAE EEECCCCCEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHH VRAVFEAVDWAPIKACVAGNPSIANGEMVQAYETAVVDPLFATTDWFGGVADAVDQPTAE HHHHHHHHCCCHHHHEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHCCCCCC EPGVASPTEPVAAPAVAPMTIPAVYERIAELVRASGMDAQGRMVGGVVYTPFELASSMVK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCEEECHHHHHHHHHH LARLQPHETVLEPSCGRGSLVFAIIAEWLARGFTHEQVARWAEAKLFVGDLDGQAVEDLR HHHCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCEEEEECCCCHHHHHHH ALYRSYFAEHGVTTELNARVGDALFDGWTGTFDVTIANPPYVGLGKLPKDYAKRVRASFS HHHHHHHHHCCCCEEECCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH TCAKGMADIYQAFIEQAQTQSDRSVVIAPNAWMRTKAGTALRNLLRPRVRSVVDFEHRRV HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCEE FLGPLGASVLTAIVVTGPATQAPVLFRTDMPHESDTPWTVAFRQSDEAMGPAAWALDPAM EECCCCHHHHHHHHEECCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEECCCC PGDAIDPDATTLGDLAEVLVGVNTNANEAYEVENWTLDGGGVRATNRHGHEVHLPMKDAP CCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECEEEECCCCEEECCCCCCEEECCCCCCC LFLKLTKVKTFADVERAHRMLCPYDADLKVVPEAQLAPEVLNWFRDHSDLLHARDGGDLR EEEEEEHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHEECCCCCCCC GYEAWYAYGRKQGLYTFDPTERLLLVPCMVDGPMTPIDVPPGQLGGRFLWASGFVVRAKN CHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCEEEEECC PADHHRVKELLAASSTWRFLYRRGKLWTGRYRTFTPNQLRQVPEGVTVTPVVQPVNMVSA CHHHHHHHHHHHHHHHHHHHHHCCCEEECCEECCCHHHHHHCCCCCEEEHHHCCHHHHHC TV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA