| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027936
Identifier: 238027936
GI number: 238027936
Start: 2616865
End: 2617737
Strand: Direct
Name: 238027936
Synonym: bglu_1g23810
Alternate gene names: NA
Gene position: 2616865-2617737 (Clockwise)
Preceding gene: 238027935
Following gene: 238027937
Centisome position: 66.99
GC content: 67.81
Gene sequence:
>873_bases GTGGAAGGCTACGTCTATGTGATGTCGAACAAGGCGATGCCGGGCCTGGTCAAGGTCGGCTTCACCACCGGGACGCCCGA CGAACGGGCGGCGCAGCTCAACGGGACGCACTCGCCCCATCCCGTGGTGGTTGAATACTCGACGCACGTGCCGGACGCGC GAGCGGTCGAACGGGACGCCCACCTGCGCCTTCGCAAGCACCGCGAGGGAAAGGAATGGTTCCGGTGCTCGCGTGAACTG GCGATCAACGCGATCAAGCGCGCCGCTGGCGACCTCGCCCGGAACGAGTTCTCCCGTGTCGAGCAGGAACGGCAACAGGC GGCCTACCAAGAGCAAGCCCGGCAGCACCGAGAAGCCGAGAAACGGGTGCGCGACGAGGAGCAACGGAAGGCCGGGTTGA GGATCGCCGTGGAGCAGCGCTACGGGCCCCGCATGGCGAAGTGCTTCCCGTCGTTCCGGACGGTCTACGGATGGTCGTGC GTCGCGGCATGGCTCGTGATCGCGTGCTTCCCCGGCGCCACGTTCACAGGCGGTCTGTTCGGGGGTGCCCTTCTCGGATT CATCCTCGCCTTCGTCGCCAAAAGCGTCCTCGACGAACGAGCCATGAAATCCCCGGCGTACGTCGCCGCTGCTGCGGAGC GCCAGCGCGAGCTGGACGCGATCGACCGATCAGGGCCACCACCGGCGCCTGCATCGAGCACGTCGACTCCCGCCAAACCC ATCGCCTCAACCCGTGCTACGGCACCAACTCCCCGTCTTGTGCGCGGGGACTACACCATCGAGCCGCCGACCGGAACGAT TGCCGCGGACAAGTCCCCAGAGCAGAGGGCCCGCGAGCGCGCCGCCCGCGTGAAACCGGACCCGGCCGCGTAG
Upstream 100 bases:
>100_bases CCGGTGCGGCCCAAGCGAAGACACACGCTCACGCCCAGCTCGCTACCATCTGGCAGGCTGCGGACAATCTGCACTGAACA CGTCCCCAACGGAGGGAACC
Downstream 100 bases:
>100_bases GCTCGGGCCAGCGCCTCCCCTCCGCCCGATCCGCCCACGCCCGTGCCAAGGTGCGGGTTTATGAACGCTTTTTTTGGTGC AAATCGCCCGTAAAATGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MEGYVYVMSNKAMPGLVKVGFTTGTPDERAAQLNGTHSPHPVVVEYSTHVPDARAVERDAHLRLRKHREGKEWFRCSREL AINAIKRAAGDLARNEFSRVEQERQQAAYQEQARQHREAEKRVRDEEQRKAGLRIAVEQRYGPRMAKCFPSFRTVYGWSC VAAWLVIACFPGATFTGGLFGGALLGFILAFVAKSVLDERAMKSPAYVAAAAERQRELDAIDRSGPPPAPASSTSTPAKP IASTRATAPTPRLVRGDYTIEPPTGTIAADKSPEQRARERAARVKPDPAA
Sequences:
>Translated_290_residues MEGYVYVMSNKAMPGLVKVGFTTGTPDERAAQLNGTHSPHPVVVEYSTHVPDARAVERDAHLRLRKHREGKEWFRCSREL AINAIKRAAGDLARNEFSRVEQERQQAAYQEQARQHREAEKRVRDEEQRKAGLRIAVEQRYGPRMAKCFPSFRTVYGWSC VAAWLVIACFPGATFTGGLFGGALLGFILAFVAKSVLDERAMKSPAYVAAAAERQRELDAIDRSGPPPAPASSTSTPAKP IASTRATAPTPRLVRGDYTIEPPTGTIAADKSPEQRARERAARVKPDPAA >Mature_290_residues MEGYVYVMSNKAMPGLVKVGFTTGTPDERAAQLNGTHSPHPVVVEYSTHVPDARAVERDAHLRLRKHREGKEWFRCSREL AINAIKRAAGDLARNEFSRVEQERQQAAYQEQARQHREAEKRVRDEEQRKAGLRIAVEQRYGPRMAKCFPSFRTVYGWSC VAAWLVIACFPGATFTGGLFGGALLGFILAFVAKSVLDERAMKSPAYVAAAAERQRELDAIDRSGPPPAPASSTSTPAKP IASTRATAPTPRLVRGDYTIEPPTGTIAADKSPEQRARERAARVKPDPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31924; Mature: 31924
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGYVYVMSNKAMPGLVKVGFTTGTPDERAAQLNGTHSPHPVVVEYSTHVPDARAVERDA CCCEEEEEECCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHH HLRLRKHREGKEWFRCSRELAINAIKRAAGDLARNEFSRVEQERQQAAYQEQARQHREAE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRVRDEEQRKAGLRIAVEQRYGPRMAKCFPSFRTVYGWSCVAAWLVIACFPGATFTGGLF HHHHHHHHHHCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH GGALLGFILAFVAKSVLDERAMKSPAYVAAAAERQRELDAIDRSGPPPAPASSTSTPAKP HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH IASTRATAPTPRLVRGDYTIEPPTGTIAADKSPEQRARERAARVKPDPAA HHHCCCCCCCCCEEECCEEECCCCCCEECCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MEGYVYVMSNKAMPGLVKVGFTTGTPDERAAQLNGTHSPHPVVVEYSTHVPDARAVERDA CCCEEEEEECCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHH HLRLRKHREGKEWFRCSRELAINAIKRAAGDLARNEFSRVEQERQQAAYQEQARQHREAE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRVRDEEQRKAGLRIAVEQRYGPRMAKCFPSFRTVYGWSCVAAWLVIACFPGATFTGGLF HHHHHHHHHHCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH GGALLGFILAFVAKSVLDERAMKSPAYVAAAAERQRELDAIDRSGPPPAPASSTSTPAKP HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH IASTRATAPTPRLVRGDYTIEPPTGTIAADKSPEQRARERAARVKPDPAA HHHCCCCCCCCCEEECCEEECCCCCCEECCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA