Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027937

Identifier: 238027937

GI number: 238027937

Start: 2617931

End: 2618308

Strand: Direct

Name: 238027937

Synonym: bglu_1g23820

Alternate gene names: NA

Gene position: 2617931-2618308 (Clockwise)

Preceding gene: 238027936

Following gene: 238027938

Centisome position: 67.01

GC content: 65.08

Gene sequence:

>378_bases
GTGGTAAAGGTGGTCGACGAGCGGAGTGCGAAGGAAATGGTCCAAGGGATCGGTCAGCGGCTGGCCGCTGTTCGTCGCGC
CCGCGGATGGACCCAGGCGGTGCTCGCCGACAAGCTCGGCTTGGAAAAGGAGAGCGTGTCGCGCCTGGAAAGCGGCAAGG
TCGCGATTTCGATCGAGCGCCTCGTGATGTTTTGCGACGTGCTGGACGTGCCGATCGAGGAGATTCTCACCTCCGCGTCC
GTGCACCCCACCGACGAAGCCCGCACCCTCATCGCCTCGCTGAAAGGGCTGGCCCCGGCCCAGCGCGCGATCGTCCTGAA
ATCTGCCCACCACCTGGCGTCGCTCCTCAAAAAGGAGAAGGATCCCGCCCGGGACTGA

Upstream 100 bases:

>100_bases
AATGCAGTTTGCGTCATCAGTTACAGACTGAGTCATCTACAAAGACGCAGCCAGACGACACACTTCACGTCATTGGATGA
CGTGCGGGGAGATTCTGGTT

Downstream 100 bases:

>100_bases
GCCCGACCCGCGCAGCACCGCCGCGGGCGCGATACCCTGTCGGTTGAACCAGTGCCCCAGGAGGTCGTGCGATGTGCGGA
CGGTACAGCCGAGGTCAGGG

Product: XRE family transcriptional regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MVKVVDERSAKEMVQGIGQRLAAVRRARGWTQAVLADKLGLEKESVSRLESGKVAISIERLVMFCDVLDVPIEEILTSAS
VHPTDEARTLIASLKGLAPAQRAIVLKSAHHLASLLKKEKDPARD

Sequences:

>Translated_125_residues
MVKVVDERSAKEMVQGIGQRLAAVRRARGWTQAVLADKLGLEKESVSRLESGKVAISIERLVMFCDVLDVPIEEILTSAS
VHPTDEARTLIASLKGLAPAQRAIVLKSAHHLASLLKKEKDPARD
>Mature_125_residues
MVKVVDERSAKEMVQGIGQRLAAVRRARGWTQAVLADKLGLEKESVSRLESGKVAISIERLVMFCDVLDVPIEEILTSAS
VHPTDEARTLIASLKGLAPAQRAIVLKSAHHLASLLKKEKDPARD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13634; Mature: 13634

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKVVDERSAKEMVQGIGQRLAAVRRARGWTQAVLADKLGLEKESVSRLESGKVAISIER
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHH
LVMFCDVLDVPIEEILTSASVHPTDEARTLIASLKGLAPAQRAIVLKSAHHLASLLKKEK
HHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
DPARD
CCCCC
>Mature Secondary Structure
MVKVVDERSAKEMVQGIGQRLAAVRRARGWTQAVLADKLGLEKESVSRLESGKVAISIER
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHH
LVMFCDVLDVPIEEILTSASVHPTDEARTLIASLKGLAPAQRAIVLKSAHHLASLLKKEK
HHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
DPARD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA