| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is suhB [H]
Identifier: 238027927
GI number: 238027927
Start: 2602191
End: 2603006
Strand: Direct
Name: suhB [H]
Synonym: bglu_1g23690
Alternate gene names: 238027927
Gene position: 2602191-2603006 (Clockwise)
Preceding gene: 238027924
Following gene: 238027931
Centisome position: 66.61
GC content: 65.32
Gene sequence:
>816_bases ATGCATCCCATGCTCAATATCGCTGTCAAGGCTGCGCGCCGCGCCGGACAGATCATCAACCGCGCGTCGCTCGACCTCGA CATGATCGAGATCCGCAAGAAGCAGCAGAACGATTTCGTGACGGAAGTCGACAAGGCATCCGAAGACGCGATCATCGAGA CGCTGAAGACGGCCTACCCCGACCACGCGATCCTGGCCGAGGAATCGGGCAAGTCGGACAACGAATCCGAATACGTCTGG ATCATCGATCCGCTCGACGGCACCACCAACTTCATCCACGGCTTCCCGTACTACTGCGTGTCGATCGCGCTCGCGCATCG CGGCGTGGTGCAGCAGGCCGTCGTCTACGATCCGAACAGCAACGACCTGTTCACCGCCACGCGCGGCCGCGGCGCCTATC TGAACGACCGCCGCATCCGCGTCGGCCGACGCGACCGCCTGGCGGACGCACTGGTCGGCACCGGCTTCCCGTTCCGCGAG AAGGACGGCCTCGACAACTACATGAAGCTGTTCCTGGAGATGACGCAATCGTGTACCGGGCTGCGCCGTCCGGGCGCGGC GGCGCTCGATCTCGCGAACGTCGCGGCGGGCCGGCTCGACGCGTTCTTCGAGCAGGGCATCCACGCCTGGGACATGGCCG CGGGCAGCCTGCTGATCACCGAGGCGGGCGGCCTCGTCGGCAACTACCACGGCGATGCCGACTTCCTGCATCGCCACGAG ATCGTCGCGGCGAACCCGAAGATCTACGCGCAGATGATCCCGATCCTGAACCGTTATTCGCGCATCGGCGGCGACGCCGC GCAGGCGCAGCAGTAA
Upstream 100 bases:
>100_bases GTCTTCCGTCGACGAAACGTCCGCCCTGCCTTGCCGGGCGCCGCGTCGCCGGTTCGATCCACCTCGCGGCGGCCCGTGCC GCCGGCTTCAGGATTCAGCT
Downstream 100 bases:
>100_bases AGGCCCTTGCGCCGCGCCCGGGCGCGGCGCAAGGGCGCTGTCAGGTTGGCCAGTGTGGCCGCGTAAGATGGGACGATGAA ACCGAAAGCGCTCCACCACG
Product: ImpA
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MHPMLNIAVKAARRAGQIINRASLDLDMIEIRKKQQNDFVTEVDKASEDAIIETLKTAYPDHAILAEESGKSDNESEYVW IIDPLDGTTNFIHGFPYYCVSIALAHRGVVQQAVVYDPNSNDLFTATRGRGAYLNDRRIRVGRRDRLADALVGTGFPFRE KDGLDNYMKLFLEMTQSCTGLRRPGAAALDLANVAAGRLDAFFEQGIHAWDMAAGSLLITEAGGLVGNYHGDADFLHRHE IVAANPKIYAQMIPILNRYSRIGGDAAQAQQ
Sequences:
>Translated_271_residues MHPMLNIAVKAARRAGQIINRASLDLDMIEIRKKQQNDFVTEVDKASEDAIIETLKTAYPDHAILAEESGKSDNESEYVW IIDPLDGTTNFIHGFPYYCVSIALAHRGVVQQAVVYDPNSNDLFTATRGRGAYLNDRRIRVGRRDRLADALVGTGFPFRE KDGLDNYMKLFLEMTQSCTGLRRPGAAALDLANVAAGRLDAFFEQGIHAWDMAAGSLLITEAGGLVGNYHGDADFLHRHE IVAANPKIYAQMIPILNRYSRIGGDAAQAQQ >Mature_271_residues MHPMLNIAVKAARRAGQIINRASLDLDMIEIRKKQQNDFVTEVDKASEDAIIETLKTAYPDHAILAEESGKSDNESEYVW IIDPLDGTTNFIHGFPYYCVSIALAHRGVVQQAVVYDPNSNDLFTATRGRGAYLNDRRIRVGRRDRLADALVGTGFPFRE KDGLDNYMKLFLEMTQSCTGLRRPGAAALDLANVAAGRLDAFFEQGIHAWDMAAGSLLITEAGGLVGNYHGDADFLHRHE IVAANPKIYAQMIPILNRYSRIGGDAAQAQQ
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=258, Percent_Identity=34.4961240310078, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI221625487, Length=258, Percent_Identity=34.4961240310078, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI7657236, Length=256, Percent_Identity=38.28125, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI221625507, Length=145, Percent_Identity=35.1724137931034, Blast_Score=104, Evalue=1e-22, Organism=Escherichia coli, GI1788882, Length=254, Percent_Identity=49.2125984251969, Blast_Score=253, Evalue=1e-68, Organism=Escherichia coli, GI1790659, Length=131, Percent_Identity=32.0610687022901, Blast_Score=65, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193202572, Length=256, Percent_Identity=32.421875, Blast_Score=149, Evalue=1e-36, Organism=Caenorhabditis elegans, GI193202570, Length=263, Percent_Identity=31.9391634980989, Blast_Score=139, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6320493, Length=212, Percent_Identity=38.6792452830189, Blast_Score=143, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6321836, Length=231, Percent_Identity=30.7359307359307, Blast_Score=114, Evalue=2e-26, Organism=Drosophila melanogaster, GI21357329, Length=268, Percent_Identity=35.0746268656716, Blast_Score=162, Evalue=2e-40, Organism=Drosophila melanogaster, GI24664922, Length=264, Percent_Identity=33.3333333333333, Blast_Score=153, Evalue=1e-37, Organism=Drosophila melanogaster, GI21357303, Length=253, Percent_Identity=34.3873517786561, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI24664926, Length=236, Percent_Identity=32.6271186440678, Blast_Score=131, Evalue=4e-31, Organism=Drosophila melanogaster, GI21357957, Length=279, Percent_Identity=32.258064516129, Blast_Score=128, Evalue=4e-30, Organism=Drosophila melanogaster, GI24664918, Length=250, Percent_Identity=33.6, Blast_Score=123, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29950; Mature: 29950
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPMLNIAVKAARRAGQIINRASLDLDMIEIRKKQQNDFVTEVDKASEDAIIETLKTAYP CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHCC DHAILAEESGKSDNESEYVWIIDPLDGTTNFIHGFPYYCVSIALAHRGVVQQAVVYDPNS CCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHEEECCCC NDLFTATRGRGAYLNDRRIRVGRRDRLADALVGTGFPFREKDGLDNYMKLFLEMTQSCTG CCEEEEECCCCCEECCCEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC LRRPGAAALDLANVAAGRLDAFFEQGIHAWDMAAGSLLITEAGGLVGNYHGDADFLHRHE CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCEEEEECCCCEECCCCCHHHHHHCC IVAANPKIYAQMIPILNRYSRIGGDAAQAQQ EEECCCHHHHHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure MHPMLNIAVKAARRAGQIINRASLDLDMIEIRKKQQNDFVTEVDKASEDAIIETLKTAYP CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHCC DHAILAEESGKSDNESEYVWIIDPLDGTTNFIHGFPYYCVSIALAHRGVVQQAVVYDPNS CCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHEEECCCC NDLFTATRGRGAYLNDRRIRVGRRDRLADALVGTGFPFREKDGLDNYMKLFLEMTQSCTG CCEEEEECCCCCEECCCEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC LRRPGAAALDLANVAAGRLDAFFEQGIHAWDMAAGSLLITEAGGLVGNYHGDADFLHRHE CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCEEEEECCCCEECCCCCHHHHHHCC IVAANPKIYAQMIPILNRYSRIGGDAAQAQQ EEECCCHHHHHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]