The gene/protein map for NC_012724 is currently unavailable.
Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027921

Identifier: 238027921

GI number: 238027921

Start: 2597256

End: 2597972

Strand: Direct

Name: 238027921

Synonym: bglu_1g23630

Alternate gene names: NA

Gene position: 2597256-2597972 (Clockwise)

Preceding gene: 238027913

Following gene: 238027922

Centisome position: 66.49

GC content: 71.83

Gene sequence:

>717_bases
ATGAAATCTTCCAGCGGCCGCGCGCCGAGCGCTGCGACCCTCGTTGCGACCGCCCTCCTCGGTCTCGCGCTGGCGCTTCC
GGCCTTTGCCCAGAAAGCACCCGCCGCCACCGACGGCACGCCGGAGATCGACGCGTCGATCACGAACCGCAACTGGTCGG
CGGCGCTGGCACAGCTCGACGCGCGCATCGCGACGAACCCGCGCGACGTGCAGGCGCAGTTCAAGCGCGGCACGGTGCTG
GCCCGGCTGAACCGCGACGACGACGCGATCCAACAGTTCGTCGCGCTCACGCAGGCCTACCCCGAGTTGCCCGAACCGTA
CAACAACCTCGCCGCGCTGTACGCGAAGCACGGCCGCTACGACGAGGCGCGCGCCGCGCTCGTCACCGCGATCAAGGCGA
ATCCCGACTACGGTCTCGCCTACGAGAATCTGGGCGACCTGTACCTGCGGCTCGCGGCGGCGTCATACCAGCGCGCGCAG
TCGCTCGGCCAGGCGAGCGGCCCGACCGCGCAGCGGCTTGCCGACCTGCAGCGCATCGTTTCGCCGCCGGCCGACCAACG
CGCCGCGGCTGCCGCGCCGGCGAGCCGGACCCGCGCGCTGACGGACCGGGCGGCCTCGAACCTGTCCACCACCACGCTGC
CGCTGTCGCCCTCGTTCCAGTTCGGCATCTCGGACGGCTCGCTCGCGGTGCCGCCCTACCTGGCGCCATCGAACTGA

Upstream 100 bases:

>100_bases
AGCGGTAACGGCGCGAGAGGCAAAAGACAGTCCGCAGCTCGCCGGAATGCGCGGACGATTTGCTAGAATGGCTCGGAGTA
TAACATTGCGATTTGAGCCT

Downstream 100 bases:

>100_bases
CGCGGGAATCGGACGCGCGGCAGGGCTTCCCAATCCATTCACTCAACCAGAGGATCGTCATGAAACGTCTGTTGTTGGCG
CTCGGCAGCGCCGCCTTCGT

Product: Tetratricopeptide repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family Protein; Signal Peptide Protein; Tpr Repeat-Containing Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; TPR Domain-Containing Protein; Exported Protein

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKSSSGRAPSAATLVATALLGLALALPAFAQKAPAATDGTPEIDASITNRNWSAALAQLDARIATNPRDVQAQFKRGTVL
ARLNRDDDAIQQFVALTQAYPELPEPYNNLAALYAKHGRYDEARAALVTAIKANPDYGLAYENLGDLYLRLAAASYQRAQ
SLGQASGPTAQRLADLQRIVSPPADQRAAAAAPASRTRALTDRAASNLSTTTLPLSPSFQFGISDGSLAVPPYLAPSN

Sequences:

>Translated_238_residues
MKSSSGRAPSAATLVATALLGLALALPAFAQKAPAATDGTPEIDASITNRNWSAALAQLDARIATNPRDVQAQFKRGTVL
ARLNRDDDAIQQFVALTQAYPELPEPYNNLAALYAKHGRYDEARAALVTAIKANPDYGLAYENLGDLYLRLAAASYQRAQ
SLGQASGPTAQRLADLQRIVSPPADQRAAAAAPASRTRALTDRAASNLSTTTLPLSPSFQFGISDGSLAVPPYLAPSN
>Mature_238_residues
MKSSSGRAPSAATLVATALLGLALALPAFAQKAPAATDGTPEIDASITNRNWSAALAQLDARIATNPRDVQAQFKRGTVL
ARLNRDDDAIQQFVALTQAYPELPEPYNNLAALYAKHGRYDEARAALVTAIKANPDYGLAYENLGDLYLRLAAASYQRAQ
SLGQASGPTAQRLADLQRIVSPPADQRAAAAAPASRTRALTDRAASNLSTTTLPLSPSFQFGISDGSLAVPPYLAPSN

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25017; Mature: 25017

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSSGRAPSAATLVATALLGLALALPAFAQKAPAATDGTPEIDASITNRNWSAALAQLD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHH
ARIATNPRDVQAQFKRGTVLARLNRDDDAIQQFVALTQAYPELPEPYNNLAALYAKHGRY
HHHCCCCHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
DEARAALVTAIKANPDYGLAYENLGDLYLRLAAASYQRAQSLGQASGPTAQRLADLQRIV
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
SPPADQRAAAAAPASRTRALTDRAASNLSTTTLPLSPSFQFGISDGSLAVPPYLAPSN
CCCCCHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCCEECCCCCCEECCCCCCCCC
>Mature Secondary Structure
MKSSSGRAPSAATLVATALLGLALALPAFAQKAPAATDGTPEIDASITNRNWSAALAQLD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHH
ARIATNPRDVQAQFKRGTVLARLNRDDDAIQQFVALTQAYPELPEPYNNLAALYAKHGRY
HHHCCCCHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
DEARAALVTAIKANPDYGLAYENLGDLYLRLAAASYQRAQSLGQASGPTAQRLADLQRIV
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
SPPADQRAAAAAPASRTRALTDRAASNLSTTTLPLSPSFQFGISDGSLAVPPYLAPSN
CCCCCHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCCEECCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA