| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027913
Identifier: 238027913
GI number: 238027913
Start: 2587393
End: 2587911
Strand: Direct
Name: 238027913
Synonym: bglu_1g23550
Alternate gene names: NA
Gene position: 2587393-2587911 (Clockwise)
Preceding gene: 238027912
Following gene: 238027921
Centisome position: 66.23
GC content: 48.55
Gene sequence:
>519_bases ATGATGCCACACCCATCGAAAATAAGAGACAGAACGATGCGAGAAATAGAAGCAGATATGGAGAAGTTCTGCGATGAGGG TAATATCGGCGCTGTGATGAATCTCGTTGATGAGATGGGCGAAATGGAGGATCGCCTGTTCTTTTTCGCCCAATCAGGAG ATCTTGGCAAGGTCAAGCATTATGAGTCGCTAGGCTGCAACCTGAGACAGAATGACGATGCTTTACTGAAAACCGCAGCT TGTGGCGGTCAAGTCGATGTAATGAGGTATCTTATCGAAAAAGGCGCGGATGTACATGCGGAGGGTGACAAGGCAATTTC CCTCGCGTCAGCTCATGGTTATCTGCAAGCAGTTCAGTATCTGATAGAGCAAGGCGCTGATGTCAACATTGCAATCGAAC GCGGCAAAGATGATGTGAGAGATTGGGCTATGGCATACAAACAAGCCCATGATCTACATCAGCACCTCAGCGAAGCGCTT CCCCAGCATGAGGCAAGCACCTCGAAGAGGAAAATCTGA
Upstream 100 bases:
>100_bases TAAAAAAGGCACTTGAGCGGAAATCCGCAGCCGCATCCAAACCTGCTCCACCGCTCCCCCAATCCATTCCATCCAATTTT CCACCACAAGGGGACAAAGC
Downstream 100 bases:
>100_bases ATCGCCCGCCTTAAGGAACATTAGATCGACTTATTTAGAGTCACCACCAAATAGTCGTTTCATTGTTTCCTTGGACGCCA ACTCAAGTTTCCTCACGCCA
Product: putative ankyrin repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MMPHPSKIRDRTMREIEADMEKFCDEGNIGAVMNLVDEMGEMEDRLFFFAQSGDLGKVKHYESLGCNLRQNDDALLKTAA CGGQVDVMRYLIEKGADVHAEGDKAISLASAHGYLQAVQYLIEQGADVNIAIERGKDDVRDWAMAYKQAHDLHQHLSEAL PQHEASTSKRKI
Sequences:
>Translated_172_residues MMPHPSKIRDRTMREIEADMEKFCDEGNIGAVMNLVDEMGEMEDRLFFFAQSGDLGKVKHYESLGCNLRQNDDALLKTAA CGGQVDVMRYLIEKGADVHAEGDKAISLASAHGYLQAVQYLIEQGADVNIAIERGKDDVRDWAMAYKQAHDLHQHLSEAL PQHEASTSKRKI >Mature_172_residues MMPHPSKIRDRTMREIEADMEKFCDEGNIGAVMNLVDEMGEMEDRLFFFAQSGDLGKVKHYESLGCNLRQNDDALLKTAA CGGQVDVMRYLIEKGADVHAEGDKAISLASAHGYLQAVQYLIEQGADVNIAIERGKDDVRDWAMAYKQAHDLHQHLSEAL PQHEASTSKRKI
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19263; Mature: 19263
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPHPSKIRDRTMREIEADMEKFCDEGNIGAVMNLVDEMGEMEDRLFFFAQSGDLGKVKH CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHH YESLGCNLRQNDDALLKTAACGGQVDVMRYLIEKGADVHAEGDKAISLASAHGYLQAVQY HHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH LIEQGADVNIAIERGKDDVRDWAMAYKQAHDLHQHLSEALPQHEASTSKRKI HHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHCCCC >Mature Secondary Structure MMPHPSKIRDRTMREIEADMEKFCDEGNIGAVMNLVDEMGEMEDRLFFFAQSGDLGKVKH CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHH YESLGCNLRQNDDALLKTAACGGQVDVMRYLIEKGADVHAEGDKAISLASAHGYLQAVQY HHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH LIEQGADVNIAIERGKDDVRDWAMAYKQAHDLHQHLSEALPQHEASTSKRKI HHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA