Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027913

Identifier: 238027913

GI number: 238027913

Start: 2587393

End: 2587911

Strand: Direct

Name: 238027913

Synonym: bglu_1g23550

Alternate gene names: NA

Gene position: 2587393-2587911 (Clockwise)

Preceding gene: 238027912

Following gene: 238027921

Centisome position: 66.23

GC content: 48.55

Gene sequence:

>519_bases
ATGATGCCACACCCATCGAAAATAAGAGACAGAACGATGCGAGAAATAGAAGCAGATATGGAGAAGTTCTGCGATGAGGG
TAATATCGGCGCTGTGATGAATCTCGTTGATGAGATGGGCGAAATGGAGGATCGCCTGTTCTTTTTCGCCCAATCAGGAG
ATCTTGGCAAGGTCAAGCATTATGAGTCGCTAGGCTGCAACCTGAGACAGAATGACGATGCTTTACTGAAAACCGCAGCT
TGTGGCGGTCAAGTCGATGTAATGAGGTATCTTATCGAAAAAGGCGCGGATGTACATGCGGAGGGTGACAAGGCAATTTC
CCTCGCGTCAGCTCATGGTTATCTGCAAGCAGTTCAGTATCTGATAGAGCAAGGCGCTGATGTCAACATTGCAATCGAAC
GCGGCAAAGATGATGTGAGAGATTGGGCTATGGCATACAAACAAGCCCATGATCTACATCAGCACCTCAGCGAAGCGCTT
CCCCAGCATGAGGCAAGCACCTCGAAGAGGAAAATCTGA

Upstream 100 bases:

>100_bases
TAAAAAAGGCACTTGAGCGGAAATCCGCAGCCGCATCCAAACCTGCTCCACCGCTCCCCCAATCCATTCCATCCAATTTT
CCACCACAAGGGGACAAAGC

Downstream 100 bases:

>100_bases
ATCGCCCGCCTTAAGGAACATTAGATCGACTTATTTAGAGTCACCACCAAATAGTCGTTTCATTGTTTCCTTGGACGCCA
ACTCAAGTTTCCTCACGCCA

Product: putative ankyrin repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MMPHPSKIRDRTMREIEADMEKFCDEGNIGAVMNLVDEMGEMEDRLFFFAQSGDLGKVKHYESLGCNLRQNDDALLKTAA
CGGQVDVMRYLIEKGADVHAEGDKAISLASAHGYLQAVQYLIEQGADVNIAIERGKDDVRDWAMAYKQAHDLHQHLSEAL
PQHEASTSKRKI

Sequences:

>Translated_172_residues
MMPHPSKIRDRTMREIEADMEKFCDEGNIGAVMNLVDEMGEMEDRLFFFAQSGDLGKVKHYESLGCNLRQNDDALLKTAA
CGGQVDVMRYLIEKGADVHAEGDKAISLASAHGYLQAVQYLIEQGADVNIAIERGKDDVRDWAMAYKQAHDLHQHLSEAL
PQHEASTSKRKI
>Mature_172_residues
MMPHPSKIRDRTMREIEADMEKFCDEGNIGAVMNLVDEMGEMEDRLFFFAQSGDLGKVKHYESLGCNLRQNDDALLKTAA
CGGQVDVMRYLIEKGADVHAEGDKAISLASAHGYLQAVQYLIEQGADVNIAIERGKDDVRDWAMAYKQAHDLHQHLSEAL
PQHEASTSKRKI

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19263; Mature: 19263

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPHPSKIRDRTMREIEADMEKFCDEGNIGAVMNLVDEMGEMEDRLFFFAQSGDLGKVKH
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHH
YESLGCNLRQNDDALLKTAACGGQVDVMRYLIEKGADVHAEGDKAISLASAHGYLQAVQY
HHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
LIEQGADVNIAIERGKDDVRDWAMAYKQAHDLHQHLSEALPQHEASTSKRKI
HHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHCCCC
>Mature Secondary Structure
MMPHPSKIRDRTMREIEADMEKFCDEGNIGAVMNLVDEMGEMEDRLFFFAQSGDLGKVKH
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHH
YESLGCNLRQNDDALLKTAACGGQVDVMRYLIEKGADVHAEGDKAISLASAHGYLQAVQY
HHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
LIEQGADVNIAIERGKDDVRDWAMAYKQAHDLHQHLSEALPQHEASTSKRKI
HHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA