| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027900
Identifier: 238027900
GI number: 238027900
Start: 2571046
End: 2571372
Strand: Direct
Name: 238027900
Synonym: bglu_1g23380
Alternate gene names: NA
Gene position: 2571046-2571372 (Clockwise)
Preceding gene: 238027897
Following gene: 238027901
Centisome position: 65.81
GC content: 61.47
Gene sequence:
>327_bases ATGAACAAGAAGGCAACCAAGTTTTCCCCGGAAGTCCGGGAGCGCGCAGTGCGTCTGGTACGTGAGCAGCGTAGCGAACA TCCGTCGATGTGGGCGGCGGTCGAATCGATTGCGCCGATGATCGGCTGTACGCCGCAGACGCTGCTGGATTGGGTCAAGC GCGAGGAGATCGATCGTGGGGAACGTGATGGCGTGAGCACGGCCGAGCGTGAACGCATCAAGGCCCTGGAGCGTGAGGTC AAGGAACTGCGCCGTACCAACGAGATTCTCAAGCTGGCGAGCGCGTTTTTCGCCCAGGCGGAGCTCGACCGCCGATTCAA GTCCTGA
Upstream 100 bases:
>100_bases TCGAACGTGTGACTTAGAGGCCAGTTCAAAAACTCCCGAGAGGGGCTGTTTGAACCGCACCGAATTTTGTGGAGGCTCGG ATTCTTGAGAGAATGGAGCC
Downstream 100 bases:
>100_bases AAGCCTTCGTTGATCAGCATCGCGACACCTTCGGGGTCGAGCCGATCTGCAAGGTCTCGCGGATTGCCCCGTCGGGCTAC CGACGCCATGCTGCGCGGCT
Product: transposase IS3/IS911
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MNKKATKFSPEVRERAVRLVREQRSEHPSMWAAVESIAPMIGCTPQTLLDWVKREEIDRGERDGVSTAERERIKALEREV KELRRTNEILKLASAFFAQAELDRRFKS
Sequences:
>Translated_108_residues MNKKATKFSPEVRERAVRLVREQRSEHPSMWAAVESIAPMIGCTPQTLLDWVKREEIDRGERDGVSTAERERIKALEREV KELRRTNEILKLASAFFAQAELDRRFKS >Mature_108_residues MNKKATKFSPEVRERAVRLVREQRSEHPSMWAAVESIAPMIGCTPQTLLDWVKREEIDRGERDGVSTAERERIKALEREV KELRRTNEILKLASAFFAQAELDRRFKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 12613; Mature: 12613
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKATKFSPEVRERAVRLVREQRSEHPSMWAAVESIAPMIGCTPQTLLDWVKREEIDRG CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC ERDGVSTAERERIKALEREVKELRRTNEILKLASAFFAQAELDRRFKS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKKATKFSPEVRERAVRLVREQRSEHPSMWAAVESIAPMIGCTPQTLLDWVKREEIDRG CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC ERDGVSTAERERIKALEREVKELRRTNEILKLASAFFAQAELDRRFKS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7518087 [H]