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The map label for this gene is insF1 [C]

Identifier: 238027901

GI number: 238027901

Start: 2571369

End: 2572217

Strand: Direct

Name: insF1 [C]

Synonym: bglu_1g23390

Alternate gene names: 238027901

Gene position: 2571369-2572217 (Clockwise)

Preceding gene: 238027900

Following gene: 238027902

Centisome position: 65.82

GC content: 60.9

Gene sequence:

>849_bases
CTGAAAGCCTTCGTTGATCAGCATCGCGACACCTTCGGGGTCGAGCCGATCTGCAAGGTCTCGCGGATTGCCCCGTCGGG
CTACCGACGCCATGCTGCGCGGCTTCGTGATCCGTCCAAACGCTGCGCTCGTGCCAAACGCGATGAGGTCCTGCAACCCG
AGATCAAGCGTGTCTGGCAGGCCAACATGCAGGTCTACGGTGTGCCGAAGGTCTGGAAGCAGATGAACCGGGAGGGCATT
GTGGTCGCACGCTGCACGGTCGGGCGGCTGATGAAGCTGCAGGGCTTGCGTGGCGCAGTTCGCGGCAAGCGGGTTCGCAC
GACGAATCCCGATACGAGCGCTGCGCGCCCGCTGGACCGGGTCAACCGGCGGTTCAAGGCTGAGCGCCCAAATCAGCTTT
GGGTGTCTGACTTCACCTATGTCTCGACATGGCAGGGTTGGCTGTACGTGGCGTTCGTGATCGACGTGTTTGCCCGTCGC
ATCGTCGGTTGGCGCGTCAGTTCGTCGATGAGCACGGACTTCGTTCTGGATGCGCTCGAACAGGCGCTGTACGCGCGCCA
ACCGGGCGACGATGGGACCTTGATACACCACTCCGATAGGGGGGCTCAATACGTCAGCATTCGGTACAGCGAACGTTTGG
CCGAGGCGGGTATCGAGCCGTCCGTCGGCAGCCGTGGCGACAGCTACGATAACGCGCTGGCTGAAACGATCAACGGTCTC
TACAAGACTGAACTGATTCATCGGCGCGCCCCTTGGAAAACGAGGGAATCCGTCGAACTGGCAACGCTGGAATGGGTCGC
CTGGTACAACCATCATCGGCTGATGTATAGAAGTTCAGACTTGATCTGA

Upstream 100 bases:

>100_bases
CCCTGGAGCGTGAGGTCAAGGAACTGCGCCGTACCAACGAGATTCTCAAGCTGGCGAGCGCGTTTTTCGCCCAGGCGGAG
CTCGACCGCCGATTCAAGTC

Downstream 100 bases:

>100_bases
CAGTAAGGCCTTGCCAAGAGGCGGGGTTACCCGTTTTGATAGAGGTGCGAATCTTCATCAAAACAGCGCGCAAGCGCCAA
GGAGTAACCCCGTGAGTAGT

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKAFVDQHRDTFGVEPICKVSRIAPSGYRRHAARLRDPSKRCARAKRDEVLQPEIKRVWQANMQVYGVPKVWKQMNREGI
VVARCTVGRLMKLQGLRGAVRGKRVRTTNPDTSAARPLDRVNRRFKAERPNQLWVSDFTYVSTWQGWLYVAFVIDVFARR
IVGWRVSSSMSTDFVLDALEQALYARQPGDDGTLIHHSDRGAQYVSIRYSERLAEAGIEPSVGSRGDSYDNALAETINGL
YKTELIHRRAPWKTRESVELATLEWVAWYNHHRLMYRSSDLI

Sequences:

>Translated_282_residues
MKAFVDQHRDTFGVEPICKVSRIAPSGYRRHAARLRDPSKRCARAKRDEVLQPEIKRVWQANMQVYGVPKVWKQMNREGI
VVARCTVGRLMKLQGLRGAVRGKRVRTTNPDTSAARPLDRVNRRFKAERPNQLWVSDFTYVSTWQGWLYVAFVIDVFARR
IVGWRVSSSMSTDFVLDALEQALYARQPGDDGTLIHHSDRGAQYVSIRYSERLAEAGIEPSVGSRGDSYDNALAETINGL
YKTELIHRRAPWKTRESVELATLEWVAWYNHHRLMYRSSDLI
>Mature_282_residues
MKAFVDQHRDTFGVEPICKVSRIAPSGYRRHAARLRDPSKRCARAKRDEVLQPEIKRVWQANMQVYGVPKVWKQMNREGI
VVARCTVGRLMKLQGLRGAVRGKRVRTTNPDTSAARPLDRVNRRFKAERPNQLWVSDFTYVSTWQGWLYVAFVIDVFARR
IVGWRVSSSMSTDFVLDALEQALYARQPGDDGTLIHHSDRGAQYVSIRYSERLAEAGIEPSVGSRGDSYDNALAETINGL
YKTELIHRRAPWKTRESVELATLEWVAWYNHHRLMYRSSDLI

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=259, Percent_Identity=53.2818532818533, Blast_Score=270, Evalue=2e-72,
Organism=Escherichia coli, GI1788405, Length=249, Percent_Identity=32.9317269076305, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI1787263, Length=249, Percent_Identity=32.9317269076305, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI1786753, Length=249, Percent_Identity=32.9317269076305, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI1786570, Length=249, Percent_Identity=32.9317269076305, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI1786490, Length=249, Percent_Identity=32.9317269076305, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI1789981, Length=270, Percent_Identity=28.5185185185185, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 32535; Mature: 32535

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFVDQHRDTFGVEPICKVSRIAPSGYRRHAARLRDPSKRCARAKRDEVLQPEIKRVWQ
CCCHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH
ANMQVYGVPKVWKQMNREGIVVARCTVGRLMKLQGLRGAVRGKRVRTTNPDTSAARPLDR
CCCEEEECHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCEEECCCCCCHHHCCHHH
VNRRFKAERPNQLWVSDFTYVSTWQGWLYVAFVIDVFARRIVGWRVSSSMSTDFVLDALE
HHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
QALYARQPGDDGTLIHHSDRGAQYVSIRYSERLAEAGIEPSVGSRGDSYDNALAETINGL
HHHHHCCCCCCCCEEEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
YKTELIHRRAPWKTRESVELATLEWVAWYNHHRLMYRSSDLI
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC
>Mature Secondary Structure
MKAFVDQHRDTFGVEPICKVSRIAPSGYRRHAARLRDPSKRCARAKRDEVLQPEIKRVWQ
CCCHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH
ANMQVYGVPKVWKQMNREGIVVARCTVGRLMKLQGLRGAVRGKRVRTTNPDTSAARPLDR
CCCEEEECHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCEEECCCCCCHHHCCHHH
VNRRFKAERPNQLWVSDFTYVSTWQGWLYVAFVIDVFARRIVGWRVSSSMSTDFVLDALE
HHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
QALYARQPGDDGTLIHHSDRGAQYVSIRYSERLAEAGIEPSVGSRGDSYDNALAETINGL
HHHHHCCCCCCCCEEEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
YKTELIHRRAPWKTRESVELATLEWVAWYNHHRLMYRSSDLI
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2159625; 2824781 [H]