| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027893
Identifier: 238027893
GI number: 238027893
Start: 2561606
End: 2562730
Strand: Reverse
Name: 238027893
Synonym: bglu_1g23310
Alternate gene names: NA
Gene position: 2562730-2561606 (Counterclockwise)
Preceding gene: 238027894
Following gene: 238027892
Centisome position: 65.6
GC content: 67.11
Gene sequence:
>1125_bases ATGAACCATACGCCGATGATTGTCTCCGCGTCGTGCATCTTTCCATCCGGGCCCCGCATCGAGCTAGCGGACACGGCAGT GCGCGCGCAGTTGGCCCAACTCCAGCGGCATCCCGACTACGTCGACGGCGCGGGTGAGCCGGTTCGCTGCAGTTTCTTCC CCGGCGACCGTGCTTTCGACGCGGCGCGCTGGGGGGCACTCGCGTGCGAGGCGCTCGAGCAAGTGATGGACGACTTGGAT CGTCGAGGTCACGAGGCGCTGCGCGACTCAGTCCGTTGGCTCTGGATCGTGCTTCCGGAGAGCGCGCTTCGTCCCGGCCT GCCGTCTGACCTCGTCGAGACGGTGAAGGCATCGGTCCAGGAGGTAGGGAAAGGGTGGACCGAGGTGCTGATCCGGAATG GCGGCCATGCCGCGGGTGTCGCCGCGATCCAAGAAGCCGCCGCAAGGCTAGCGGAGAACCCTACCGCGCTGGCCGTCGTA CTCGGCGTCGAGGCGGGTCTGGGTCACGATGCGTTGATGTGGCTCGACGCACGATCGCTGCTGCATGGAGCGCATCGCGC GTATCGCGGTCGATTCCGGGTAGAGCCCCATGGTCGCGTGCCTGGCGAAGGTGCCGCCGCGCTTGCGCTATCCGGGCGAT TCGCGTCGGGCGGAAAAAGTTGGGCGCGGTTGCTTGGCGTGGGACAGGCGCACGAGCCGCACACTCATGGCTCCGGGAAG GTCTGCATAGGCGCGGGCCTATCTCAAGCGGTCCGTGTCGCGCTCGGGCAGGGGCGGGCATTCAGCGCCGACCAGATCGG CTGGATTTCGGTCGATCTGAACGGCGAGCCGTATCGAGCCGACCAGTTCGGCTTTGCGGCGCTTCGGCTAGCCGAAGCGC TGGCGCCGGGCTGGCGGCGTGTCGTTCCCGCGCTGGCCAGTGGCGATCTTGCTAGCGCCAGCGCGATCGCGCATGTTGCG TTGGCCGCCTACGGAATGTGGAAGCGCCCACGGCAAGCGAATCACCTCGTTCTCTCCAGCTCCGATGACCCGCTGCGTGG CGCAGTGCTCGTCGGCCCCACCGATCCCTCGCCCGCATGGCAGGAGAGCCGCTCATGGCGATCACCATCAACGTTAATGG CCTGA
Upstream 100 bases:
>100_bases CGATGAAGCGTCGACCACTCGATAAGGCGTGGCAAGCCGTGTTCGGCGATGTCCTGACCGCAGCCGAGGCGAGCCCTGAA TCCGACACGGGGCAATCCGC
Downstream 100 bases:
>100_bases CGCTCTGCCATCGCGGCAGCGGCGGCGTCAGCGACAACACCTTGCCGGACGTTTGCAAGACGCCGGGCAACGGCGTGCCG GTGCCGTATCAGAACGAGGC
Product: beta-ketoacyl synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MNHTPMIVSASCIFPSGPRIELADTAVRAQLAQLQRHPDYVDGAGEPVRCSFFPGDRAFDAARWGALACEALEQVMDDLD RRGHEALRDSVRWLWIVLPESALRPGLPSDLVETVKASVQEVGKGWTEVLIRNGGHAAGVAAIQEAAARLAENPTALAVV LGVEAGLGHDALMWLDARSLLHGAHRAYRGRFRVEPHGRVPGEGAAALALSGRFASGGKSWARLLGVGQAHEPHTHGSGK VCIGAGLSQAVRVALGQGRAFSADQIGWISVDLNGEPYRADQFGFAALRLAEALAPGWRRVVPALASGDLASASAIAHVA LAAYGMWKRPRQANHLVLSSSDDPLRGAVLVGPTDPSPAWQESRSWRSPSTLMA
Sequences:
>Translated_374_residues MNHTPMIVSASCIFPSGPRIELADTAVRAQLAQLQRHPDYVDGAGEPVRCSFFPGDRAFDAARWGALACEALEQVMDDLD RRGHEALRDSVRWLWIVLPESALRPGLPSDLVETVKASVQEVGKGWTEVLIRNGGHAAGVAAIQEAAARLAENPTALAVV LGVEAGLGHDALMWLDARSLLHGAHRAYRGRFRVEPHGRVPGEGAAALALSGRFASGGKSWARLLGVGQAHEPHTHGSGK VCIGAGLSQAVRVALGQGRAFSADQIGWISVDLNGEPYRADQFGFAALRLAEALAPGWRRVVPALASGDLASASAIAHVA LAAYGMWKRPRQANHLVLSSSDDPLRGAVLVGPTDPSPAWQESRSWRSPSTLMA >Mature_374_residues MNHTPMIVSASCIFPSGPRIELADTAVRAQLAQLQRHPDYVDGAGEPVRCSFFPGDRAFDAARWGALACEALEQVMDDLD RRGHEALRDSVRWLWIVLPESALRPGLPSDLVETVKASVQEVGKGWTEVLIRNGGHAAGVAAIQEAAARLAENPTALAVV LGVEAGLGHDALMWLDARSLLHGAHRAYRGRFRVEPHGRVPGEGAAALALSGRFASGGKSWARLLGVGQAHEPHTHGSGK VCIGAGLSQAVRVALGQGRAFSADQIGWISVDLNGEPYRADQFGFAALRLAEALAPGWRRVVPALASGDLASASAIAHVA LAAYGMWKRPRQANHLVLSSSDDPLRGAVLVGPTDPSPAWQESRSWRSPSTLMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39689; Mature: 39689
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHTPMIVSASCIFPSGPRIELADTAVRAQLAQLQRHPDYVDGAGEPVRCSFFPGDRAFD CCCCCEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHH AARWGALACEALEQVMDDLDRRGHEALRDSVRWLWIVLPESALRPGLPSDLVETVKASVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHCCCCCCHHHHHHHHHHHH EVGKGWTEVLIRNGGHAAGVAAIQEAAARLAENPTALAVVLGVEAGLGHDALMWLDARSL HHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHH LHGAHRAYRGRFRVEPHGRVPGEGAAALALSGRFASGGKSWARLLGVGQAHEPHTHGSGK HHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCC VCIGAGLSQAVRVALGQGRAFSADQIGWISVDLNGEPYRADQFGFAALRLAEALAPGWRR EEEECCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHH VVPALASGDLASASAIAHVALAAYGMWKRPRQANHLVLSSSDDPLRGAVLVGPTDPSPAW HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCH QESRSWRSPSTLMA HHHCCCCCCHHCCC >Mature Secondary Structure MNHTPMIVSASCIFPSGPRIELADTAVRAQLAQLQRHPDYVDGAGEPVRCSFFPGDRAFD CCCCCEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHH AARWGALACEALEQVMDDLDRRGHEALRDSVRWLWIVLPESALRPGLPSDLVETVKASVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHCCCCCCHHHHHHHHHHHH EVGKGWTEVLIRNGGHAAGVAAIQEAAARLAENPTALAVVLGVEAGLGHDALMWLDARSL HHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHH LHGAHRAYRGRFRVEPHGRVPGEGAAALALSGRFASGGKSWARLLGVGQAHEPHTHGSGK HHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCC VCIGAGLSQAVRVALGQGRAFSADQIGWISVDLNGEPYRADQFGFAALRLAEALAPGWRR EEEECCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHH VVPALASGDLASASAIAHVALAAYGMWKRPRQANHLVLSSSDDPLRGAVLVGPTDPSPAW HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCH QESRSWRSPSTLMA HHHCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA