| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027892
Identifier: 238027892
GI number: 238027892
Start: 2560587
End: 2561636
Strand: Reverse
Name: 238027892
Synonym: bglu_1g23300
Alternate gene names: NA
Gene position: 2561636-2560587 (Counterclockwise)
Preceding gene: 238027893
Following gene: 238027891
Centisome position: 65.57
GC content: 57.33
Gene sequence:
>1050_bases ATGGCGATCACCATCAACGTTAATGGCCTGACGCTCTGCCATCGCGGCAGCGGCGGCGTCAGCGACAACACCTTGCCGGA CGTTTGCAAGACGCCGGGCAACGGCGTGCCGGTGCCGTATCAGAACGAGGCGTACTCGCGCGACCTGATCAAGGGCACGA CATCAGTGTTTGCCGACGGTGGGAACATGATCGCGAACTACGGCAGCCAGTTCTCGAAAAGCATTTTTGACGAGGCGGGC TCGATGGGCGGCGTCGTGTCGGGCACGCACCTCGCGGAAACCGACTGGATCACTCATTCGTTTGACGTGAAATTCGAAGG CAAGGCGGCCTGCAGGTTGACCGACAAGCTGTTCATGAACCATCGAAACACGGTCAACATGGCGGGCTTGAAGCAGCGCG ATCTGCCTGAAGACGAACAGGATCTGCTCGACGAGCTCTGCCGGATGGCGTGCGAGTGTTTGAAGGAGTGGCAAGGAAAG TTGCCGCAGGGCAAGACGTTTCAGGATTGCGTTCGAAAGAAGATCGACGAAAAGTATTACGACGGAAGCGGGCATCCGAA GCCGGATGCCAAGGCGTGGCGCGAAATTCCTTACGATCGAGGCCAAGATTGGGATCTGATCGGTAGCAAGGGCAATCCGG ACATCCCGACCTCGAACTACATTCGGCCGAATTCCCGGCGCCTCGACGTGGCGCCGGTTGAAAACGGCAAGGTGACCAAG CTGTATGATATGAAATTCGGAGGTGATGAACTAAGCGCTGCTGCGGAAAAAGACTATCGAGAGATAGCGCGAAAGCACAC GGGGGATGCCGACAATTTCGAGGAGTTTCGAGTCGACGAACGTTGCAACTGCGACGATGACTGGCCACCGCCCAAGACGG TTCCGGTGACTGTACCCGCTCCTCAGGAAAAGGGCTTAATGGACAAGATCGGTGATGCGTTGTTTTCGACGACGGGTATT CGTTTGACCGGCGCAGCGTTGCTGACCTACGTGATCCTTTCCGAAGGCAGTCGACTATTTCCCCCGCGCAATGCCGTGCC GATACCCTGA
Upstream 100 bases:
>100_bases AAGCGAATCACCTCGTTCTCTCCAGCTCCGATGACCCGCTGCGTGGCGCAGTGCTCGTCGGCCCCACCGATCCCTCGCCC GCATGGCAGGAGAGCCGCTC
Downstream 100 bases:
>100_bases TTTCTGGTTCGGCGCACGGTCAATTTATTTGCAGAGACGAAACGATGGATCCTGATCAGGTAGTGGGTGACCTTCTTCAA TCGCATGGTGGTCCGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MAITINVNGLTLCHRGSGGVSDNTLPDVCKTPGNGVPVPYQNEAYSRDLIKGTTSVFADGGNMIANYGSQFSKSIFDEAG SMGGVVSGTHLAETDWITHSFDVKFEGKAACRLTDKLFMNHRNTVNMAGLKQRDLPEDEQDLLDELCRMACECLKEWQGK LPQGKTFQDCVRKKIDEKYYDGSGHPKPDAKAWREIPYDRGQDWDLIGSKGNPDIPTSNYIRPNSRRLDVAPVENGKVTK LYDMKFGGDELSAAAEKDYREIARKHTGDADNFEEFRVDERCNCDDDWPPPKTVPVTVPAPQEKGLMDKIGDALFSTTGI RLTGAALLTYVILSEGSRLFPPRNAVPIP
Sequences:
>Translated_349_residues MAITINVNGLTLCHRGSGGVSDNTLPDVCKTPGNGVPVPYQNEAYSRDLIKGTTSVFADGGNMIANYGSQFSKSIFDEAG SMGGVVSGTHLAETDWITHSFDVKFEGKAACRLTDKLFMNHRNTVNMAGLKQRDLPEDEQDLLDELCRMACECLKEWQGK LPQGKTFQDCVRKKIDEKYYDGSGHPKPDAKAWREIPYDRGQDWDLIGSKGNPDIPTSNYIRPNSRRLDVAPVENGKVTK LYDMKFGGDELSAAAEKDYREIARKHTGDADNFEEFRVDERCNCDDDWPPPKTVPVTVPAPQEKGLMDKIGDALFSTTGI RLTGAALLTYVILSEGSRLFPPRNAVPIP >Mature_348_residues AITINVNGLTLCHRGSGGVSDNTLPDVCKTPGNGVPVPYQNEAYSRDLIKGTTSVFADGGNMIANYGSQFSKSIFDEAGS MGGVVSGTHLAETDWITHSFDVKFEGKAACRLTDKLFMNHRNTVNMAGLKQRDLPEDEQDLLDELCRMACECLKEWQGKL PQGKTFQDCVRKKIDEKYYDGSGHPKPDAKAWREIPYDRGQDWDLIGSKGNPDIPTSNYIRPNSRRLDVAPVENGKVTKL YDMKFGGDELSAAAEKDYREIARKHTGDADNFEEFRVDERCNCDDDWPPPKTVPVTVPAPQEKGLMDKIGDALFSTTGIR LTGAALLTYVILSEGSRLFPPRNAVPIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38557; Mature: 38425
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITINVNGLTLCHRGSGGVSDNTLPDVCKTPGNGVPVPYQNEAYSRDLIKGTTSVFADG CEEEEEECCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC GNMIANYGSQFSKSIFDEAGSMGGVVSGTHLAETDWITHSFDVKFEGKAACRLTDKLFMN CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEEEEEECCCHHHHHHHHHHHC HRNTVNMAGLKQRDLPEDEQDLLDELCRMACECLKEWQGKLPQGKTFQDCVRKKIDEKYY CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC DGSGHPKPDAKAWREIPYDRGQDWDLIGSKGNPDIPTSNYIRPNSRRLDVAPVENGKVTK CCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEE LYDMKFGGDELSAAAEKDYREIARKHTGDADNFEEFRVDERCNCDDDWPPPKTVPVTVPA EEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEECCC PQEKGLMDKIGDALFSTTGIRLTGAALLTYVILSEGSRLFPPRNAVPIP CCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCEECCCCCCCCCC >Mature Secondary Structure AITINVNGLTLCHRGSGGVSDNTLPDVCKTPGNGVPVPYQNEAYSRDLIKGTTSVFADG EEEEEECCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC GNMIANYGSQFSKSIFDEAGSMGGVVSGTHLAETDWITHSFDVKFEGKAACRLTDKLFMN CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEEEEEECCCHHHHHHHHHHHC HRNTVNMAGLKQRDLPEDEQDLLDELCRMACECLKEWQGKLPQGKTFQDCVRKKIDEKYY CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC DGSGHPKPDAKAWREIPYDRGQDWDLIGSKGNPDIPTSNYIRPNSRRLDVAPVENGKVTK CCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEE LYDMKFGGDELSAAAEKDYREIARKHTGDADNFEEFRVDERCNCDDDWPPPKTVPVTVPA EEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEECCC PQEKGLMDKIGDALFSTTGIRLTGAALLTYVILSEGSRLFPPRNAVPIP CCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA