| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027891
Identifier: 238027891
GI number: 238027891
Start: 2559556
End: 2560542
Strand: Reverse
Name: 238027891
Synonym: bglu_1g23290
Alternate gene names: NA
Gene position: 2560542-2559556 (Counterclockwise)
Preceding gene: 238027892
Following gene: 238027890
Centisome position: 65.55
GC content: 55.62
Gene sequence:
>987_bases ATGGATCCTGATCAGGTAGTGGGTGACCTTCTTCAATCGCATGGTGGTCCGTGCGCCTTGGATAGGCTGCATCTGCCATA TGCGAACCCGGATTCCGGGCCGGCTGCCAAATTCGGGCTGGGCTGCGAGTTGTTTTTGCCGAGCATCGACCGCGGTACGC TCGGCGAGCGGGCGCTCCAGTTCTTGCTGGACTATCACCAGATGTTTCCGGAGCAGGTCGACAAATTTCTTCCGCGCGAT GCGCGTCGTGCAGTGAAATTTTCAAACGATCTCAAGTCGCGCCTCGACCATGACTATCATCAAGGCCCTCCAGAGCATGG ATACAGTACGGCACTGTTTGGCGCAGTCGACATCGGATTGCCGAAGGATGATGTTGCTCCCTATCAGGCACACGTGCTGA TCAGTCGTGCTGACGAGAAGGACCTTTCTTTCGTAAAGGCCTATCTGCCTGTCTGCTGGAGTGATCGCCCCAATTATGCT TTGCTGACGGAGGCGGTATTGCGGTGGAGTGCGCTTTGTCGTCCAGTACATGGAACAGCGGGGCTCACACTGATCTATGC GTCCGGTATGTCTCAAAACACCAAGTACGCCCTCCCGGTAATGAAGCGATTTCCGGGCTTCGATTACATTTATGGCGTCG ATTTCTCGATGGAAGCAGGAGCGGTCCACAATCGCATCAAGTGTGTTAGCTGGCTGACGGTGCTTGGGGATGAAATCGTG ACGGAGTTGGGCGGCACCGATCGGATGCGTGCTGCGCTCGAGCCGACCTGCAAGATCCACGAATATCCGGGCGGCGTTGT GATTCAGGCAGGAGAAAACCCGCAACTCGGCGATGCGACACGAGGTGACATTCCGGAGGCGTATCGGATGGTTGCGAGGT ACACGAAGCCTGTTCGCTTCGAAGCATATTCCAGCAGACTGTTCCGTGTGCCGGACAATCTTGATAAGAAAGAAGAGACG CTGCGCTGGATTCGGAGATTTGACTAG
Upstream 100 bases:
>100_bases TCCTTTCCGAAGGCAGTCGACTATTTCCCCCGCGCAATGCCGTGCCGATACCCTGATTTCTGGTTCGGCGCACGGTCAAT TTATTTGCAGAGACGAAACG
Downstream 100 bases:
>100_bases GGCGACGCGGGTCAGAAGTAGAGACTATGCTGCGGCCATGAGCTGTAGAAGTTCAGACTTGATCTGACAGTAAGGCCTTG CCAAGAGGCGGGGTTACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MDPDQVVGDLLQSHGGPCALDRLHLPYANPDSGPAAKFGLGCELFLPSIDRGTLGERALQFLLDYHQMFPEQVDKFLPRD ARRAVKFSNDLKSRLDHDYHQGPPEHGYSTALFGAVDIGLPKDDVAPYQAHVLISRADEKDLSFVKAYLPVCWSDRPNYA LLTEAVLRWSALCRPVHGTAGLTLIYASGMSQNTKYALPVMKRFPGFDYIYGVDFSMEAGAVHNRIKCVSWLTVLGDEIV TELGGTDRMRAALEPTCKIHEYPGGVVIQAGENPQLGDATRGDIPEAYRMVARYTKPVRFEAYSSRLFRVPDNLDKKEET LRWIRRFD
Sequences:
>Translated_328_residues MDPDQVVGDLLQSHGGPCALDRLHLPYANPDSGPAAKFGLGCELFLPSIDRGTLGERALQFLLDYHQMFPEQVDKFLPRD ARRAVKFSNDLKSRLDHDYHQGPPEHGYSTALFGAVDIGLPKDDVAPYQAHVLISRADEKDLSFVKAYLPVCWSDRPNYA LLTEAVLRWSALCRPVHGTAGLTLIYASGMSQNTKYALPVMKRFPGFDYIYGVDFSMEAGAVHNRIKCVSWLTVLGDEIV TELGGTDRMRAALEPTCKIHEYPGGVVIQAGENPQLGDATRGDIPEAYRMVARYTKPVRFEAYSSRLFRVPDNLDKKEET LRWIRRFD >Mature_328_residues MDPDQVVGDLLQSHGGPCALDRLHLPYANPDSGPAAKFGLGCELFLPSIDRGTLGERALQFLLDYHQMFPEQVDKFLPRD ARRAVKFSNDLKSRLDHDYHQGPPEHGYSTALFGAVDIGLPKDDVAPYQAHVLISRADEKDLSFVKAYLPVCWSDRPNYA LLTEAVLRWSALCRPVHGTAGLTLIYASGMSQNTKYALPVMKRFPGFDYIYGVDFSMEAGAVHNRIKCVSWLTVLGDEIV TELGGTDRMRAALEPTCKIHEYPGGVVIQAGENPQLGDATRGDIPEAYRMVARYTKPVRFEAYSSRLFRVPDNLDKKEET LRWIRRFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36777; Mature: 36777
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPDQVVGDLLQSHGGPCALDRLHLPYANPDSGPAAKFGLGCELFLPSIDRGTLGERALQ CCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHCCCEEEECCCCCCCCHHHHHHH FLLDYHQMFPEQVDKFLPRDARRAVKFSNDLKSRLDHDYHQGPPEHGYSTALFGAVDIGL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHEECCC PKDDVAPYQAHVLISRADEKDLSFVKAYLPVCWSDRPNYALLTEAVLRWSALCRPVHGTA CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC GLTLIYASGMSQNTKYALPVMKRFPGFDYIYGVDFSMEAGAVHNRIKCVSWLTVLGDEIV CEEEEEECCCCCCCEEECHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH TELGGTDRMRAALEPTCKIHEYPGGVVIQAGENPQLGDATRGDIPEAYRMVARYTKPVRF HHHCCCHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEE EAYSSRLFRVPDNLDKKEETLRWIRRFD EHHHCCEEECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MDPDQVVGDLLQSHGGPCALDRLHLPYANPDSGPAAKFGLGCELFLPSIDRGTLGERALQ CCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHCCCEEEECCCCCCCCHHHHHHH FLLDYHQMFPEQVDKFLPRDARRAVKFSNDLKSRLDHDYHQGPPEHGYSTALFGAVDIGL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHEECCC PKDDVAPYQAHVLISRADEKDLSFVKAYLPVCWSDRPNYALLTEAVLRWSALCRPVHGTA CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC GLTLIYASGMSQNTKYALPVMKRFPGFDYIYGVDFSMEAGAVHNRIKCVSWLTVLGDEIV CEEEEEECCCCCCCEEECHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH TELGGTDRMRAALEPTCKIHEYPGGVVIQAGENPQLGDATRGDIPEAYRMVARYTKPVRF HHHCCCHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEE EAYSSRLFRVPDNLDKKEETLRWIRRFD EHHHCCEEECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA