Click here to switch to the map view.

The map label for this gene is 238027882

Identifier: 238027882

GI number: 238027882

Start: 2544603

End: 2545121

Strand: Reverse

Name: 238027882

Synonym: bglu_1g23150

Alternate gene names: NA

Gene position: 2545121-2544603 (Counterclockwise)

Preceding gene: 238027883

Following gene: 238027881

Centisome position: 65.15

GC content: 70.13

Gene sequence:

>519_bases
ATGCGCTTCGTTATGCCTGAGCGTGCACGGCATGCTTGCGTAATCGAAATGAATATGAAAGAGTTGCGTCGGCAATTCAT
CATGAGAATCGCCGTGCTCGGCGGGGTGGCCTGGCTTGCCGGCTGCGGCGTGTCGGGCGATTCGCGGCCGCCGGCCGGCT
TGAATCTCGCGCTGACCCAGCCGACGTCGGGCGGCACCTATGTCGTGACGCTCGTTCCGCCCGAGCCGCCCGCGGCGCTG
CCGCTGAACCGGATCCACGCCTGGCGCGTCGCGCTGAGCCGCGCATCCGGCGAGCCGGTGAGCGGCGCGCGCATCGACGT
GGCCGGCGGCATGCCGCAGCACGGGCATGGCCTGCCGACCCGTCCGCGCGTCGTATCGGCCGGCGGCGGCGGCTACCGGC
TCGAGGGCATGAAGTTCAGCATGCCCGGCTGGTGGACGATCACGTTGAAGGTGCGGGCCGCGCAGGGCGACGACGACGTG
ACCTTCAACGTCGTGCTGCCCCCGGCCGCCGCGTCGTGA

Upstream 100 bases:

>100_bases
GAAAACGACCTGATCGTGTGTACCGCCCTGGGCTTGCTGGTCGTGTCGATGTTGTCCGCGTTGCTGCCGGCCCGTCGCGC
GGCCCGGATGGAGATCGTCG

Downstream 100 bases:

>100_bases
CGCGCCCCGCGGGCCGCGCGCCGACGGCCCCGATCCATCCCATCCACGGAGAAGTTTCGATGCGAAAAGTCATGGTGTAC
TGGATGCTGCTGCTGTTCGC

Product: Auxin-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRFVMPERARHACVIEMNMKELRRQFIMRIAVLGGVAWLAGCGVSGDSRPPAGLNLALTQPTSGGTYVVTLVPPEPPAAL
PLNRIHAWRVALSRASGEPVSGARIDVAGGMPQHGHGLPTRPRVVSAGGGGYRLEGMKFSMPGWWTITLKVRAAQGDDDV
TFNVVLPPAAAS

Sequences:

>Translated_172_residues
MRFVMPERARHACVIEMNMKELRRQFIMRIAVLGGVAWLAGCGVSGDSRPPAGLNLALTQPTSGGTYVVTLVPPEPPAAL
PLNRIHAWRVALSRASGEPVSGARIDVAGGMPQHGHGLPTRPRVVSAGGGGYRLEGMKFSMPGWWTITLKVRAAQGDDDV
TFNVVLPPAAAS
>Mature_172_residues
MRFVMPERARHACVIEMNMKELRRQFIMRIAVLGGVAWLAGCGVSGDSRPPAGLNLALTQPTSGGTYVVTLVPPEPPAAL
PLNRIHAWRVALSRASGEPVSGARIDVAGGMPQHGHGLPTRPRVVSAGGGGYRLEGMKFSMPGWWTITLKVRAAQGDDDV
TFNVVLPPAAAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18244; Mature: 18244

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFVMPERARHACVIEMNMKELRRQFIMRIAVLGGVAWLAGCGVSGDSRPPAGLNLALTQ
CCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEC
PTSGGTYVVTLVPPEPPAALPLNRIHAWRVALSRASGEPVSGARIDVAGGMPQHGHGLPT
CCCCCEEEEEEECCCCCCCCCHHHHHEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCC
RPRVVSAGGGGYRLEGMKFSMPGWWTITLKVRAAQGDDDVTFNVVLPPAAAS
CCEEEEECCCCEEECCEEECCCCEEEEEEEEEECCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MRFVMPERARHACVIEMNMKELRRQFIMRIAVLGGVAWLAGCGVSGDSRPPAGLNLALTQ
CCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEC
PTSGGTYVVTLVPPEPPAALPLNRIHAWRVALSRASGEPVSGARIDVAGGMPQHGHGLPT
CCCCCEEEEEEECCCCCCCCCHHHHHEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCC
RPRVVSAGGGGYRLEGMKFSMPGWWTITLKVRAAQGDDDVTFNVVLPPAAAS
CCEEEEECCCCEEECCEEECCCCEEEEEEEEEECCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA