Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027881

Identifier: 238027881

GI number: 238027881

Start: 2543410

End: 2544543

Strand: Reverse

Name: 238027881

Synonym: bglu_1g23140

Alternate gene names: NA

Gene position: 2544543-2543410 (Counterclockwise)

Preceding gene: 238027882

Following gene: 238027880

Centisome position: 65.14

GC content: 71.43

Gene sequence:

>1134_bases
ATGCGAAAAGTCATGGTGTACTGGATGCTGCTGCTGTTCGCGCAAGTCGTGCCCGGCGCCGCGGGCGCCGCCCAGGCCGG
CCCGGCGAGCGGCACGGCCGCCGCCGCGCCCGCCGCCGAGCGCGCGGACCGCCTGCCCGCCTATACGCCGCGCTTCGGGC
GCACGCGTCCGGTCGTGGCCGTGGTCGGCGAGAACTACTACACCGAACTGACCGATTACGTGGTGCCCTACGGCATCGTC
GCGGAATCGGGCGCGGCCGACCTGGTCGCGCTCGCGACGAAGCCCGGCCCGATCCGGATGTTTCCGGCGCCGATGAACCT
GATCCCCGACGAGACCACCGCACAGTTCGACCAGCGCGTGCCCGAAGGCGCCGACTACGTGATCGTGCCCGCCGTGCATC
GCGACAGCGACCCGGCGCTGATCGCCTGGGTGGCCGGGCAGGCGAAGAAGGGCGCGACCGTGATCGGGGTGTGCGACGGC
GTGTGGGTGGTCGCCCGCGCGGGCCTGCTGGACGGCCGCCGTGCGACCGGCCACTGGTACTCGATGGACGATCTGCGCAA
GAAGTTCACCGATACGCGCTGGGTCGACGGCAAGCGCTACGTCTCCGACGGCAAGGTCGTCACGACCACCGGCGTGACCG
CGACGATTCCCGTGTCGCTCGCACTCGTGGAGGCCATCGCCGGCCGTGCGCGTGCGCTGCAGGTGGGCGAGCGCCTCGGC
CGCCCCGCCTGGTCGTCGGAGATCGCGAGCGAGCGCTTCAGCCTCGGCTTGCCGGCGATGGCGACGATTGCCGGCAACTA
CGTGCAGTTCTGGGCTCACGAGGATTACGGCATTCCGATCGCGCCGGGCGTCGACGAAATCGCGCTGGTGCTGGAGGCGG
ACGCGTATTCGACGACGTTCCGTTCGACCGCGTACACCGTCGCCGCGAATCGCGAGCCGCTGCGCACGCGCCGCGGGCTG
ACGATCGTGCCCGACCGGGTCGCGGGCGTCGATGCGCCGGCGCGCATGCTGCCGGCACCCGTCACGCAGCATCCGCTGCA
CGCGCTCGACGCGTCGCTGGAGGCGATCGCCACCGAGTTCGGCAAGCGCACGGCCGCATGGGTGGCGCTGCAGATGCAAT
ACCCCGGCTACTGA

Upstream 100 bases:

>100_bases
TGACCTTCAACGTCGTGCTGCCCCCGGCCGCCGCGTCGTGACGCGCCCCGCGGGCCGCGCGCCGACGGCCCCGATCCATC
CCATCCACGGAGAAGTTTCG

Downstream 100 bases:

>100_bases
GCCGCGCGCGTGCGCGCGCCGTTCGCCCCGCTCACCCCGCTCATCCCGATACCCGCCTGGAGAGGATTTTCATGCAGATG
CATACGATGGCGCGCCGCTG

Product: ThiJ/PfpI family protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Family Protein; Transcriptional Regulator AraC Family; AraC Family Transcriptional Regulator; ThiJ/PfpI Domain Protein; Transcriptional Regulator SyrB; DJ-1/PfpI Family; ThiJ/PfpI; Transcription Regulator Protein; GATase1_AraC_1 Family Transcriptional Regulator

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MRKVMVYWMLLLFAQVVPGAAGAAQAGPASGTAAAAPAAERADRLPAYTPRFGRTRPVVAVVGENYYTELTDYVVPYGIV
AESGAADLVALATKPGPIRMFPAPMNLIPDETTAQFDQRVPEGADYVIVPAVHRDSDPALIAWVAGQAKKGATVIGVCDG
VWVVARAGLLDGRRATGHWYSMDDLRKKFTDTRWVDGKRYVSDGKVVTTTGVTATIPVSLALVEAIAGRARALQVGERLG
RPAWSSEIASERFSLGLPAMATIAGNYVQFWAHEDYGIPIAPGVDEIALVLEADAYSTTFRSTAYTVAANREPLRTRRGL
TIVPDRVAGVDAPARMLPAPVTQHPLHALDASLEAIATEFGKRTAAWVALQMQYPGY

Sequences:

>Translated_377_residues
MRKVMVYWMLLLFAQVVPGAAGAAQAGPASGTAAAAPAAERADRLPAYTPRFGRTRPVVAVVGENYYTELTDYVVPYGIV
AESGAADLVALATKPGPIRMFPAPMNLIPDETTAQFDQRVPEGADYVIVPAVHRDSDPALIAWVAGQAKKGATVIGVCDG
VWVVARAGLLDGRRATGHWYSMDDLRKKFTDTRWVDGKRYVSDGKVVTTTGVTATIPVSLALVEAIAGRARALQVGERLG
RPAWSSEIASERFSLGLPAMATIAGNYVQFWAHEDYGIPIAPGVDEIALVLEADAYSTTFRSTAYTVAANREPLRTRRGL
TIVPDRVAGVDAPARMLPAPVTQHPLHALDASLEAIATEFGKRTAAWVALQMQYPGY
>Mature_377_residues
MRKVMVYWMLLLFAQVVPGAAGAAQAGPASGTAAAAPAAERADRLPAYTPRFGRTRPVVAVVGENYYTELTDYVVPYGIV
AESGAADLVALATKPGPIRMFPAPMNLIPDETTAQFDQRVPEGADYVIVPAVHRDSDPALIAWVAGQAKKGATVIGVCDG
VWVVARAGLLDGRRATGHWYSMDDLRKKFTDTRWVDGKRYVSDGKVVTTTGVTATIPVSLALVEAIAGRARALQVGERLG
RPAWSSEIASERFSLGLPAMATIAGNYVQFWAHEDYGIPIAPGVDEIALVLEADAYSTTFRSTAYTVAANREPLRTRRGL
TIVPDRVAGVDAPARMLPAPVTQHPLHALDASLEAIATEFGKRTAAWVALQMQYPGY

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40347; Mature: 40347

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVMVYWMLLLFAQVVPGAAGAAQAGPASGTAAAAPAAERADRLPAYTPRFGRTRPVVA
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEE
VVGENYYTELTDYVVPYGIVAESGAADLVALATKPGPIRMFPAPMNLIPDETTAQFDQRV
EECCCHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCHHHHHHHCC
PEGADYVIVPAVHRDSDPALIAWVAGQAKKGATVIGVCDGVWVVARAGLLDGRRATGHWY
CCCCCEEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCEEHHHHCCCCCCCCCCCCC
SMDDLRKKFTDTRWVDGKRYVSDGKVVTTTGVTATIPVSLALVEAIAGRARALQVGERLG
CHHHHHHHHCCCEECCCCEEECCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHC
RPAWSSEIASERFSLGLPAMATIAGNYVQFWAHEDYGIPIAPGVDEIALVLEADAYSTTF
CCCHHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCC
RSTAYTVAANREPLRTRRGLTIVPDRVAGVDAPARMLPAPVTQHPLHALDASLEAIATEF
CCEEEEEECCCCCHHHHCCCEECCHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHH
GKRTAAWVALQMQYPGY
CCCEEEEEEEEEECCCC
>Mature Secondary Structure
MRKVMVYWMLLLFAQVVPGAAGAAQAGPASGTAAAAPAAERADRLPAYTPRFGRTRPVVA
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEE
VVGENYYTELTDYVVPYGIVAESGAADLVALATKPGPIRMFPAPMNLIPDETTAQFDQRV
EECCCHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCHHHHHHHCC
PEGADYVIVPAVHRDSDPALIAWVAGQAKKGATVIGVCDGVWVVARAGLLDGRRATGHWY
CCCCCEEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCEEHHHHCCCCCCCCCCCCC
SMDDLRKKFTDTRWVDGKRYVSDGKVVTTTGVTATIPVSLALVEAIAGRARALQVGERLG
CHHHHHHHHCCCEECCCCEEECCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHC
RPAWSSEIASERFSLGLPAMATIAGNYVQFWAHEDYGIPIAPGVDEIALVLEADAYSTTF
CCCHHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCC
RSTAYTVAANREPLRTRRGLTIVPDRVAGVDAPARMLPAPVTQHPLHALDASLEAIATEF
CCEEEEEECCCCCHHHHCCCEECCHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHH
GKRTAAWVALQMQYPGY
CCCEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA