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The map label for this gene is oprB [H]

Identifier: 238027855

GI number: 238027855

Start: 2494659

End: 2496053

Strand: Reverse

Name: oprB [H]

Synonym: bglu_1g22860

Alternate gene names: 238027855

Gene position: 2496053-2494659 (Counterclockwise)

Preceding gene: 238027856

Following gene: 238027854

Centisome position: 63.89

GC content: 69.53

Gene sequence:

>1395_bases
ATGAAGAAGATCAAGCTTTCCCTGAAAAAGCGCGACGCCGCCGTGCTCGGCGCCTTGCTGGCACTACTCGTCTGCCGCGG
CGCCGAAGCCGGCGCGGCGCCCACCGACCTGATGCAGCGCGCGACGCTGTTCGGCGATTTCGGCGGCATACGTCCCTGGC
TCGCCGATCACGGCGTCGATCTCGGCCTGCAGGAAAGCTCGGCGTATTTCCGCAATTTCACCGGCGGCATCCGGCGCGCC
GGCCAATATAGCGGCACCACCCAACTGACGATCGGCGTGGACACCAAGAAGGCGTTCGGCCTGCCGGGCGGCACCTTCAA
TGTATCGGGCCTGCAGATTCACGGCCGCAGCCTCAGCATGCACGATCTCGGCCTGATGCAGAACGCGGGCGGACTCGAGG
CGGACGCCGGCACGCGGCTATGGGAGCTCTGGTATCGACAGTCGCTGTTCGACGGCGCGTTCGACGTGAAGATCGGCCAG
CAGAGTCTCGATCAGGAATTCATGGTCAGCGATACCGGCTCGGTGTTCGCAAACGCCGCATTCGGCTGGCCGGGCCTGCC
GTCCGCCGACATGCCGGCGGGCGGCCCCGCCTATCCGCTGTCGTCGCTCGGCGTGCGGCTGCGGCTTGCACCGTCGGCGC
ACTGGACCTTGCTGGCCGGCGCCTTCGACGACAATCCCGCCGGCCAGGGCGAAGGGGACGCGCAACGCCTGAACGCCCAC
GGCACCACGTTCAACCTGCACGGCGGCACGCTGCTGATCGGCGAGGCCCAATACGCGCTGAACCCGGACGATCCCACCGC
GGGCGGCTTGCCTGCGGGCCTGCCCGGCACCTACAAGGTCGGGTTCTGGTACGACACCGGGCGCTTCGACGATCTGCGCG
ACGGCGCCGACGGCGTGCCGCTCGCGGCCTCGGCGAGCGGCGGCACGGCGCGCTCGCATCACGGCAACTACGGCCTTTAT
GCGATTGCCGACCAGACGGTCTGGCGCGCGGCGGCGGGCGGCCCGCGCGCGGTGAGCGTGTTCGCCGAGGTGATGGGCGC
GCCCGACGACCGCAACGTCGTCGGCATCGGCGTCAATGCGGGCCTTGCGCTGAAGGCTCCGTTCGCGGGGCGCGACGACG
ACGTGGCCGGCATCGCGGTCGGCTATTCGCAGATCGGCTCGCATGCGCGCGCGCTCGACCGCGATACCGCCGCCGCCACG
CCCGGCTATCCGCAGCGCAGCGCCGAGACCGTGCTCGAGGCCACCTACCAGTACCAGGTCGCGCCATGGTGGCAGCTGCA
AGGCGATCTCCAGTACGTGTTCCGGCCGTCCGGCGGCATCCCGAATCCGCTCGATCCGGGCCGGCGCATCGGCAACGAAC
TGATTGCCGGCGTGAAGACGGTGCTGCAGTTCTGA

Upstream 100 bases:

>100_bases
GCCCGTCACCCGGACGGGCGGAGCGGGGTGGCTCCGACCACAGCAGGCATCCTGAACGAAGACATCGGCCGTAGGGCCGT
CCCGATGTGAGATCCACCTG

Downstream 100 bases:

>100_bases
GGCGGGCCGGTGACGCGGCGGGGCGGCGTGCCATCCTCGCCGCCGTCGAGCGTTCGCTCCAGTGCGACGATCGACGCCGG
TTCGCCTTCGGCCGGCAGCA

Product: carbohydrate-selective porin OprB

Products: NA

Alternate protein names: Glucose porin; Outer membrane protein D1 [H]

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MKKIKLSLKKRDAAVLGALLALLVCRGAEAGAAPTDLMQRATLFGDFGGIRPWLADHGVDLGLQESSAYFRNFTGGIRRA
GQYSGTTQLTIGVDTKKAFGLPGGTFNVSGLQIHGRSLSMHDLGLMQNAGGLEADAGTRLWELWYRQSLFDGAFDVKIGQ
QSLDQEFMVSDTGSVFANAAFGWPGLPSADMPAGGPAYPLSSLGVRLRLAPSAHWTLLAGAFDDNPAGQGEGDAQRLNAH
GTTFNLHGGTLLIGEAQYALNPDDPTAGGLPAGLPGTYKVGFWYDTGRFDDLRDGADGVPLAASASGGTARSHHGNYGLY
AIADQTVWRAAAGGPRAVSVFAEVMGAPDDRNVVGIGVNAGLALKAPFAGRDDDVAGIAVGYSQIGSHARALDRDTAAAT
PGYPQRSAETVLEATYQYQVAPWWQLQGDLQYVFRPSGGIPNPLDPGRRIGNELIAGVKTVLQF

Sequences:

>Translated_464_residues
MKKIKLSLKKRDAAVLGALLALLVCRGAEAGAAPTDLMQRATLFGDFGGIRPWLADHGVDLGLQESSAYFRNFTGGIRRA
GQYSGTTQLTIGVDTKKAFGLPGGTFNVSGLQIHGRSLSMHDLGLMQNAGGLEADAGTRLWELWYRQSLFDGAFDVKIGQ
QSLDQEFMVSDTGSVFANAAFGWPGLPSADMPAGGPAYPLSSLGVRLRLAPSAHWTLLAGAFDDNPAGQGEGDAQRLNAH
GTTFNLHGGTLLIGEAQYALNPDDPTAGGLPAGLPGTYKVGFWYDTGRFDDLRDGADGVPLAASASGGTARSHHGNYGLY
AIADQTVWRAAAGGPRAVSVFAEVMGAPDDRNVVGIGVNAGLALKAPFAGRDDDVAGIAVGYSQIGSHARALDRDTAAAT
PGYPQRSAETVLEATYQYQVAPWWQLQGDLQYVFRPSGGIPNPLDPGRRIGNELIAGVKTVLQF
>Mature_464_residues
MKKIKLSLKKRDAAVLGALLALLVCRGAEAGAAPTDLMQRATLFGDFGGIRPWLADHGVDLGLQESSAYFRNFTGGIRRA
GQYSGTTQLTIGVDTKKAFGLPGGTFNVSGLQIHGRSLSMHDLGLMQNAGGLEADAGTRLWELWYRQSLFDGAFDVKIGQ
QSLDQEFMVSDTGSVFANAAFGWPGLPSADMPAGGPAYPLSSLGVRLRLAPSAHWTLLAGAFDDNPAGQGEGDAQRLNAH
GTTFNLHGGTLLIGEAQYALNPDDPTAGGLPAGLPGTYKVGFWYDTGRFDDLRDGADGVPLAASASGGTARSHHGNYGLY
AIADQTVWRAAAGGPRAVSVFAEVMGAPDDRNVVGIGVNAGLALKAPFAGRDDDVAGIAVGYSQIGSHARALDRDTAAAT
PGYPQRSAETVLEATYQYQVAPWWQLQGDLQYVFRPSGGIPNPLDPGRRIGNELIAGVKTVLQF

Specific function: Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of gluc

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 48716; Mature: 48716

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIKLSLKKRDAAVLGALLALLVCRGAEAGAAPTDLMQRATLFGDFGGIRPWLADHGVD
CCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCC
LGLQESSAYFRNFTGGIRRAGQYSGTTQLTIGVDTKKAFGLPGGTFNVSGLQIHGRSLSM
CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHCCCCCCCEEECEEEEECCEECH
HDLGLMQNAGGLEADAGTRLWELWYRQSLFDGAFDVKIGQQSLDQEFMVSDTGSVFANAA
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHHCCCCEEEECCCCCEEECC
FGWPGLPSADMPAGGPAYPLSSLGVRLRLAPSAHWTLLAGAFDDNPAGQGEGDAQRLNAH
CCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHEECC
GTTFNLHGGTLLIGEAQYALNPDDPTAGGLPAGLPGTYKVGFWYDTGRFDDLRDGADGVP
CCEEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHCCCCCCCC
LAASASGGTARSHHGNYGLYAIADQTVWRAAAGGPRAVSVFAEVMGAPDDRNVVGIGVNA
EEECCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEECCC
GLALKAPFAGRDDDVAGIAVGYSQIGSHARALDRDTAAATPGYPQRSAETVLEATYQYQV
CEEEECCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEEE
APWWQLQGDLQYVFRPSGGIPNPLDPGRRIGNELIAGVKTVLQF
CCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIKLSLKKRDAAVLGALLALLVCRGAEAGAAPTDLMQRATLFGDFGGIRPWLADHGVD
CCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCC
LGLQESSAYFRNFTGGIRRAGQYSGTTQLTIGVDTKKAFGLPGGTFNVSGLQIHGRSLSM
CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHCCCCCCCEEECEEEEECCEECH
HDLGLMQNAGGLEADAGTRLWELWYRQSLFDGAFDVKIGQQSLDQEFMVSDTGSVFANAA
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHHCCCCEEEECCCCCEEECC
FGWPGLPSADMPAGGPAYPLSSLGVRLRLAPSAHWTLLAGAFDDNPAGQGEGDAQRLNAH
CCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHEECC
GTTFNLHGGTLLIGEAQYALNPDDPTAGGLPAGLPGTYKVGFWYDTGRFDDLRDGADGVP
CCEEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHCCCCCCCC
LAASASGGTARSHHGNYGLYAIADQTVWRAAAGGPRAVSVFAEVMGAPDDRNVVGIGVNA
EEECCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEECCC
GLALKAPFAGRDDDVAGIAVGYSQIGSHARALDRDTAAATPGYPQRSAETVLEATYQYQV
CEEEECCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEEE
APWWQLQGDLQYVFRPSGGIPNPLDPGRRIGNELIAGVKTVLQF
CCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125108; 10984043; 2450582; 8132494; 7768797 [H]