The gene/protein map for NC_012724 is currently unavailable.
Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is ttuB [H]

Identifier: 238027807

GI number: 238027807

Start: 2436509

End: 2437819

Strand: Direct

Name: ttuB [H]

Synonym: bglu_1g22350

Alternate gene names: 238027807

Gene position: 2436509-2437819 (Clockwise)

Preceding gene: 238027806

Following gene: 238027812

Centisome position: 62.37

GC content: 66.59

Gene sequence:

>1311_bases
GTGACCGTTACCTCTCCCCCCCTCGCCGCAGCCGGCGACGAGCCGCGCGTGATGTCGAAGATCGCATGGCGTTTGATGCC
AACCCTCGTCGTGATGTTTCTGATCTCGTTCATCGACCGTCAGAACGTCGGCTTCGCCAAGCTGCAAATGGTGCATAGCC
TGAACATGACGGAGGCCGCGTTCGGGCTTGCCTCGTCGCTGTTCTTCATCGGCTATCTGCTGTTCGAGGTGCCGAGCACG
CTTGCGCTGCATCGCTTCGGCGCGCGCGTGTGGCTCGCGCGGATCATGCTGACGTGGGGCTTGATCACCGTCGCGATGGG
CTTCACGACCTCGATGCCGGTGTTCTGCGGGCTGCGCTTCCTGCTCGGCGTTGCCGAGGCCGGCTTCTATCCGGGCGCGA
TTTATTACATGACGCTGTGGTTTCCGCAGAGCTACCGCGCACGCGTGCTCGGCATCTTCACGCTCGGCAGCGCGCTCGCG
AACATGCTCGGCTCGCTGGTCGGCGGCTGGCTGCTGAGCCTGAGCGGAATCGGCGGGCTGGCGGGCTGGCAGTGGGTGTT
CATCGCGACCGGACTGCCCGCCGTGATCGTCGGCATTCTCGTGTTCCGGCTGCTGCCGACGTCGTTCCGCGAAGCGCGCT
TCCTGTCCGATCACGAAAAGGCGATCGTCGGGGCCGCGCTCGAACGCGAGGCTCCGCTGCGGGCCGAACATTCGCAGCCG
TGGAAGGCCCTGCTCGATCCGCGCGTGATCCTGTTCGCGGCCACCTACATGATGATGTCGACCTCGCTGTACGGCGTGAC
GTACTGGCTGCCGACCCTCGTCAAGTCGTTCGGCGTGGCGAGCGGCACCAACGGCCTGCTGAGCATGCTGCCGTGGGCGC
TGGCCGTGGTGCTGCTGATCTGGCTGCCGCCGAAGCTGCGCCGCGCGAAGAGCCTGCTGCGCACGATCGGGATCGTGGCG
CTGCTGGCGGCAACCGGGTTCGTGCTGAGCCTCGTGCTGCCCACCACGCCGCTGCGCTTCATCGCGCTGGTGCTCGGCGG
CGCGTGCATTCCCTTGATCTATCCGTGCTTCTGGTCGATGCCGCCGCGCTACTTCACGGGCGCGCGCGCTGCGGCAAGCG
TGGCCGCGATCAATTCGATCGGCAATCTCGGCGGATTTTTCGGCCAGAACCTGATGCCGCTCGCGGGCAAGCTGACCGGC
ACCGCGTTCGGACCGATGATCGTGCCGATCGTTTGTTTGAGCGTGCTGGGAATCGGTGCGTTGGTCGGCTGGGCGCGGTC
CGGGCGGTCGATGGCGGCGGCGAGCGCGTGA

Upstream 100 bases:

>100_bases
GGCGCCGCATCGGGCGCCTCGCTCGTCTTTGCAGTACCAGCGTGCGGGTAGCCGCCGCTCGTTCGCATTCGTACCAGTTC
GTATCCACCAGGAGTCTCGT

Downstream 100 bases:

>100_bases
GGCTGGGCTGGTGAAGCGGGCCGGACGGACGCCTTGCCGGGCGGGCGTCCGTTTCGCCGCCGTGGCTCAGCTCGCGTTGC
AGGCCGGCTCGGTCCGGCGG

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MTVTSPPLAAAGDEPRVMSKIAWRLMPTLVVMFLISFIDRQNVGFAKLQMVHSLNMTEAAFGLASSLFFIGYLLFEVPST
LALHRFGARVWLARIMLTWGLITVAMGFTTSMPVFCGLRFLLGVAEAGFYPGAIYYMTLWFPQSYRARVLGIFTLGSALA
NMLGSLVGGWLLSLSGIGGLAGWQWVFIATGLPAVIVGILVFRLLPTSFREARFLSDHEKAIVGAALEREAPLRAEHSQP
WKALLDPRVILFAATYMMMSTSLYGVTYWLPTLVKSFGVASGTNGLLSMLPWALAVVLLIWLPPKLRRAKSLLRTIGIVA
LLAATGFVLSLVLPTTPLRFIALVLGGACIPLIYPCFWSMPPRYFTGARAAASVAAINSIGNLGGFFGQNLMPLAGKLTG
TAFGPMIVPIVCLSVLGIGALVGWARSGRSMAAASA

Sequences:

>Translated_436_residues
MTVTSPPLAAAGDEPRVMSKIAWRLMPTLVVMFLISFIDRQNVGFAKLQMVHSLNMTEAAFGLASSLFFIGYLLFEVPST
LALHRFGARVWLARIMLTWGLITVAMGFTTSMPVFCGLRFLLGVAEAGFYPGAIYYMTLWFPQSYRARVLGIFTLGSALA
NMLGSLVGGWLLSLSGIGGLAGWQWVFIATGLPAVIVGILVFRLLPTSFREARFLSDHEKAIVGAALEREAPLRAEHSQP
WKALLDPRVILFAATYMMMSTSLYGVTYWLPTLVKSFGVASGTNGLLSMLPWALAVVLLIWLPPKLRRAKSLLRTIGIVA
LLAATGFVLSLVLPTTPLRFIALVLGGACIPLIYPCFWSMPPRYFTGARAAASVAAINSIGNLGGFFGQNLMPLAGKLTG
TAFGPMIVPIVCLSVLGIGALVGWARSGRSMAAASA
>Mature_435_residues
TVTSPPLAAAGDEPRVMSKIAWRLMPTLVVMFLISFIDRQNVGFAKLQMVHSLNMTEAAFGLASSLFFIGYLLFEVPSTL
ALHRFGARVWLARIMLTWGLITVAMGFTTSMPVFCGLRFLLGVAEAGFYPGAIYYMTLWFPQSYRARVLGIFTLGSALAN
MLGSLVGGWLLSLSGIGGLAGWQWVFIATGLPAVIVGILVFRLLPTSFREARFLSDHEKAIVGAALEREAPLRAEHSQPW
KALLDPRVILFAATYMMMSTSLYGVTYWLPTLVKSFGVASGTNGLLSMLPWALAVVLLIWLPPKLRRAKSLLRTIGIVAL
LAATGFVLSLVLPTTPLRFIALVLGGACIPLIYPCFWSMPPRYFTGARAAASVAAINSIGNLGGFFGQNLMPLAGKLTGT
AFGPMIVPIVCLSVLGIGALVGWARSGRSMAAASA

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI87082071, Length=373, Percent_Identity=34.3163538873995, Blast_Score=205, Evalue=4e-54,
Organism=Escherichia coli, GI87082320, Length=299, Percent_Identity=27.4247491638796, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1789515, Length=298, Percent_Identity=24.1610738255034, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI2367379, Length=437, Percent_Identity=23.1121281464531, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1789152, Length=309, Percent_Identity=23.3009708737864, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17569727, Length=209, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6322025, Length=365, Percent_Identity=26.5753424657534, Blast_Score=90, Evalue=6e-19,
Organism=Saccharomyces cerevisiae, GI6319876, Length=249, Percent_Identity=28.5140562248996, Blast_Score=86, Evalue=8e-18,
Organism=Saccharomyces cerevisiae, GI6321502, Length=202, Percent_Identity=30.6930693069307, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6321698, Length=276, Percent_Identity=21.7391304347826, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322612, Length=253, Percent_Identity=27.6679841897233, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6319250, Length=247, Percent_Identity=24.6963562753036, Blast_Score=70, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6323032, Length=206, Percent_Identity=22.8155339805825, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24658696, Length=216, Percent_Identity=28.7037037037037, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46874; Mature: 46743

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCHHCCCC
>Mature Secondary Structure 
TVTSPPLAAAGDEPRVMSKIAWRLMPTLVVMFLISFIDRQNVGFAKLQMVHSLNMTEAA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHH
FGLASSLFFIGYLLFEVPSTLALHRFGARVWLARIMLTWGLITVAMGFTTSMPVFCGLRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LLGVAEAGFYPGAIYYMTLWFPQSYRARVLGIFTLGSALANMLGSLVGGWLLSLSGIGGL
HHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AGWQWVFIATGLPAVIVGILVFRLLPTSFREARFLSDHEKAIVGAALEREAPLRAEHSQP
CHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
WKALLDPRVILFAATYMMMSTSLYGVTYWLPTLVKSFGVASGTNGLLSMLPWALAVVLLI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
WLPPKLRRAKSLLRTIGIVALLAATGFVLSLVLPTTPLRFIALVLGGACIPLIYPCFWSM
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCC
PPRYFTGARAAASVAAINSIGNLGGFFGQNLMPLAGKLTGTAFGPMIVPIVCLSVLGIGA
CCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LVGWARSGRSMAAASA
HHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]