| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027806
Identifier: 238027806
GI number: 238027806
Start: 2433803
End: 2434822
Strand: Direct
Name: 238027806
Synonym: bglu_1g22330
Alternate gene names: NA
Gene position: 2433803-2434822 (Clockwise)
Preceding gene: 238027805
Following gene: 238027807
Centisome position: 62.3
GC content: 58.53
Gene sequence:
>1020_bases ATGAATGCTACGCCTGTTGGAATCGACATTGCAAAAAGTGTCTTTCAAGTGCACTACGTCGCCCCGGAAACCGGCGAAAT CGTGAACAAGCAGATCAAGCGCTCGCAGTTTCTCGAATATTTCGCAAATCGTGCGCCGTGCATGATCGGGATGGAAGCGT GCGGTAGCGCCTATCACTGGGCAAGACAGCTGATGCAGATGGGACATCAGGTTAAGTTGATGCCAGCGAAGTTTGTGAAG GCATTCAACGTTGGCAACAAAAACGATGCGATGGACGCGCAAGCGATCTGGCTGGCAGTCCAGCAGCCACGGAAGGCGGT GGCGGTAAAAAGCGAAATGCAGCAGGCGGTGCTGATGATGCATCGTCAGCGGGAACAACTGGTGAAGTTCCGTACGATGC AGATCAACGGCTTGCGCGGGATGTTGGCCGAGTTCGGCGAGGTGATGGGTAAAGGCCGCACCGCGATGATCAAAGCAGTC CAGGACGCCCTCGCGCGTGCCGAAGCGCGGCTGCCGAAACTGCTGATCGATACACTGCGCGAGCAGTGGGCGCGGGTCAA TAAGCTGGATGAGGAAATCGCGACGATCGAGCGGCGGTTGCGCGAATGGAAGAAGGACGACAAGGCGGTACAGGCGGTTA TCGAGATTCCGGGCGTTGGCCTGCTGACGGCGACGGCAGCAGTCGCGATGATGGGTGATCCGAAAGCATTCAAGTCTGGG CGCGAGTTCGCGGCATGGGCCGGATTAGTGCCGAAGCAGACTGGCACCGGCGGCAAGGTGAGCCTCCACGGGATCAGCAA GCGCGGCGACACCTACCTGCGCACTTTGCTGATCCACGGCGCTCGATCTGTACTGACGAATGCGAAGGAGCCTGGTCCGT GGGTTGAGGGCATGAAGAAGCGGCGACCATCGAACGTGGTAGTGGTTGCGTTGGCAAACAAGATGGCGCGGACGATCTGG ACGGTGCTCGCCCATGACAGGCCGTACAGGAAAGATCACGTGAGCGTGAAGCCGGCATAA
Upstream 100 bases:
>100_bases CCCTGAATGTAGCGCAAAGGAAGGTGGATCCCGCGGGCCAACGGCATCGATGTGCCCAGGTGGAAAATGCACGCATTTCC CGGCAACCGGAGGATCCGAA
Downstream 100 bases:
>100_bases CCGTGGTCGCACGGCTTGTAAGATTAACGTTTAACACAGGGTGAACGTCGAAAGGTTGCGTTGGCAATCGTGTGAGATGA CAAGACAGGTCGGACCGGGA
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MNATPVGIDIAKSVFQVHYVAPETGEIVNKQIKRSQFLEYFANRAPCMIGMEACGSAYHWARQLMQMGHQVKLMPAKFVK AFNVGNKNDAMDAQAIWLAVQQPRKAVAVKSEMQQAVLMMHRQREQLVKFRTMQINGLRGMLAEFGEVMGKGRTAMIKAV QDALARAEARLPKLLIDTLREQWARVNKLDEEIATIERRLREWKKDDKAVQAVIEIPGVGLLTATAAVAMMGDPKAFKSG REFAAWAGLVPKQTGTGGKVSLHGISKRGDTYLRTLLIHGARSVLTNAKEPGPWVEGMKKRRPSNVVVVALANKMARTIW TVLAHDRPYRKDHVSVKPA
Sequences:
>Translated_339_residues MNATPVGIDIAKSVFQVHYVAPETGEIVNKQIKRSQFLEYFANRAPCMIGMEACGSAYHWARQLMQMGHQVKLMPAKFVK AFNVGNKNDAMDAQAIWLAVQQPRKAVAVKSEMQQAVLMMHRQREQLVKFRTMQINGLRGMLAEFGEVMGKGRTAMIKAV QDALARAEARLPKLLIDTLREQWARVNKLDEEIATIERRLREWKKDDKAVQAVIEIPGVGLLTATAAVAMMGDPKAFKSG REFAAWAGLVPKQTGTGGKVSLHGISKRGDTYLRTLLIHGARSVLTNAKEPGPWVEGMKKRRPSNVVVVALANKMARTIW TVLAHDRPYRKDHVSVKPA >Mature_339_residues MNATPVGIDIAKSVFQVHYVAPETGEIVNKQIKRSQFLEYFANRAPCMIGMEACGSAYHWARQLMQMGHQVKLMPAKFVK AFNVGNKNDAMDAQAIWLAVQQPRKAVAVKSEMQQAVLMMHRQREQLVKFRTMQINGLRGMLAEFGEVMGKGRTAMIKAV QDALARAEARLPKLLIDTLREQWARVNKLDEEIATIERRLREWKKDDKAVQAVIEIPGVGLLTATAAVAMMGDPKAFKSG REFAAWAGLVPKQTGTGGKVSLHGISKRGDTYLRTLLIHGARSVLTNAKEPGPWVEGMKKRRPSNVVVVALANKMARTIW TVLAHDRPYRKDHVSVKPA
Specific function: Required for the transposition of an insertion element (Potential) [H]
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 20 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003583 - InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 37773; Mature: 37773
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATPVGIDIAKSVFQVHYVAPETGEIVNKQIKRSQFLEYFANRAPCMIGMEACGSAYHW CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCHHHHH ARQLMQMGHQVKLMPAKFVKAFNVGNKNDAMDAQAIWLAVQQPRKAVAVKSEMQQAVLMM HHHHHHCCCCEEECHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH HRQREQLVKFRTMQINGLRGMLAEFGEVMGKGRTAMIKAVQDALARAEARLPKLLIDTLR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQWARVNKLDEEIATIERRLREWKKDDKAVQAVIEIPGVGLLTATAAVAMMGDPKAFKSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCC REFAAWAGLVPKQTGTGGKVSLHGISKRGDTYLRTLLIHGARSVLTNAKEPGPWVEGMKK CHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH RRPSNVVVVALANKMARTIWTVLAHDRPYRKDHVSVKPA CCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNATPVGIDIAKSVFQVHYVAPETGEIVNKQIKRSQFLEYFANRAPCMIGMEACGSAYHW CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCHHHHH ARQLMQMGHQVKLMPAKFVKAFNVGNKNDAMDAQAIWLAVQQPRKAVAVKSEMQQAVLMM HHHHHHCCCCEEECHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH HRQREQLVKFRTMQINGLRGMLAEFGEVMGKGRTAMIKAVQDALARAEARLPKLLIDTLR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQWARVNKLDEEIATIERRLREWKKDDKAVQAVIEIPGVGLLTATAAVAMMGDPKAFKSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCC REFAAWAGLVPKQTGTGGKVSLHGISKRGDTYLRTLLIHGARSVLTNAKEPGPWVEGMKK CHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH RRPSNVVVVALANKMARTIWTVLAHDRPYRKDHVSVKPA CCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]