The gene/protein map for NC_012724 is currently unavailable.
Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is yycG [H]

Identifier: 238027770

GI number: 238027770

Start: 2389048

End: 2391498

Strand: Reverse

Name: yycG [H]

Synonym: bglu_1g21940

Alternate gene names: 238027770

Gene position: 2391498-2389048 (Counterclockwise)

Preceding gene: 238027771

Following gene: 238027769

Centisome position: 61.22

GC content: 74.75

Gene sequence:

>2451_bases
ATGAAGCCTGACACCGGCTCCCGGCGGCGCCCCCCCGGCCGGCGCTTTCTCCTCGAATGGCTCGCGATCGGCGTGCTCGG
CGTGGCGGCCGTGCTGGCCGGCGTGGCCTGGCAGGCCACCGCGAGCATCGACCGGCTGATCTACGACCATCTGCTCGCCG
CGCGCCGCCTGGCGCCCGATCCGGCCATCGTGGTGGTCGAGATCGACAATCCGAGCCTGGAACGGCTCGGCCGCTGGCCC
TGGCCGCGCAGCGTGCATGCGCAACTGCTCGAGCGGCTCGCCCAGGCGCGGCCCGCCGCCGTGGTCTACGACGTATTGTT
TACCGAGGCCTCGCCCGACGACGCGCAACTGGCCGCCGCGCTCGCGCGCGTGCCGACCTGGCTGCCGGTGCTGCTGGGCC
CCGAGAACGCCGCCGGCGCGCGCGCGCTGACGCTGCCGGTGCCGCCGCTCGCGGCGCGCGCGGCCGGCATGGGCCACATC
AACTTCGAAGTCGATCCGGACGGCATCGTGCGCAGCGTCGCGCCGACCGAGAGCGACGGGCGGCGCGACTGGCCGCAGCT
CATGCTGGCCGTGGCGCGCGGCATCACGCGTGCCGCGGCCCCGGCGGCGGGCGCGGCGTTGGCCGCGAGCGAGGCGGGGC
CGAGCCGGCAGGGCGCGACGCCGGCGGGGGCCATGCCGCACGCCTCGCGGTTCGCCGCCTCGCTGCCCGGCGGCCGCTAC
CTGATTCCGTTCAGCCGCGGCACACCCGCCTATTCGTCCTGCTCGCTCGCCGACGTGCTGGCCGGCAAGGTGCCGGACGC
GGCGCTGCGCGGCAAGGTGATCGTGGTCGGCGTGACGGCGGCCGGACTCTACGACCGCTTCGCCACGCCGATCTCGGGCG
AGTTCGGCCCGCTGCCGGGCGTCTACCTGCATGCCAACGTGCTCGACATGCTGCTGACGGGCCGCGCGATCTCGCCGGTC
TCGCGCGGCTGGCTGTGCCTCGCCTCGCTGCCGCCGCTCGCGGCGCTGCTGGCGGGCATCCTGCTGCTGTCGCCGCGCCG
CGCGCTGCTGCTCGCGCTGTCGGTGGCGGCGCTGTCGGTGGCGGGCAGCGCGGCGCTGTTGTACGGCGCGCGACTGTGGC
TGACGCCGGCCCCGGCGATCCTCGGCCTGATCGTGGTCTATCCGACCTGGAACTGGCGGCGCCTCGACATGACCATGGCC
TACCTGCGCGACGAGCTCGAGCGGCTCGCCGCCGAGCCGCACCTGCTGCCCGAGTCGCCGCGTGCGTCCGGCGCGCGCGC
CGAGTTCGGCGGCGACCCGCTCGAGCGGCAGATGAACCTGATGGCGCAGGCCGCGCGGCGCGTGCAGGACATGAAGCGCT
TCGTCTGGGACAGCCTCGACAGCGTGCCCGAGCCGATCTTCGTGACCGACGTGGCCGGCATCGTGCTGATCGCCAACCAC
GCGGCCCGGCGCTATTGCGCGCGCCTGCGGGCGGCCTCGCCCGAGGGCCGCCCGCTGCCGGCCGCGCTCGGCGAGCTGGC
ATTCGTCAAGAGCGTGGCCCATCCCGAGCGCGAGCCGGACCTGCGCGCCGCCTGGCCGGACGCGCTCGATCCGACGCGCG
GCGAGGCGCCGGCGCTGCTCGCGAGCGGGCTCGAGGTGCGCGATGCCGACGGCCTCGACCATCTGCTGCGCTACGCGCCC
TGTACCAACGCCGAGGGCCAGGCGATCGGCTGGATCGCCGGGCTGGTGGACGTGACCGCGCTGCATGCGGCCGAGCGGCA
GCGCGAGGAGGCGCTGCATCTGCTGTCGCACGACATGCGCTCGCCGCAGGCCTCGATCCTCGCGCTGGTGCGCACCGAGC
GGCAGCGCCGCGACGCCGGGCCGGCGCAGCGCGAGCTGCTGGCCCGCATCGAGCGGCACGCGCAGCGCGCGCTGACGCTC
GCCGACGAGTTCGTGCAGCTCGCACGCGCCGAGTCGCAGACCTACCGGATCGACGTCGTGAACCTCGCGGACCTGCTGCT
CGACGCCAGCGACGAGGTCTGGCCGCAGGCGCAGGCGAAGCGGATTCGCATCGACACGGCGCTCGGCGAGGCGCCGTGCT
GGATCGGTGCGGAGCGCTCGCTGATGACGCGCGCGCTGGTGAACCTGCTGAGCAACGCGATCAAGTACAGTCCTGCCGAC
ACGCTGGTCCGCTGCACGCTGGCATTCACGGAGGCGCCGCCGCGCGTGACCTGCACGATCCGCGACCAGGGCTACGGGAT
CGCGCCCGAGCACCAGCGGCACCTGTTCGAGCGCTTCCGCCGCTTTCACGCGGGCGAGCGGCCCGAAATCGCCGGCACCG
GGCTCGGGATGGTGTTCGTGAAGACGGTGGTGACGCGGCACGGCGGCGGCATCGCGGTGGACAGCGCGCCGGGGCGAGGC
ACCGCGATCGCGATCACGCTGCCGCGGCTCACCGACGTGGCGGATCCATGA

Upstream 100 bases:

>100_bases
GCTATTACTGGACCGTGATCGCCGAGCAGTTCGTCGACGGCCGCTTCTACGACAAGGCCGGCGCCGTCAACAGTTTCACG
CTCGCGCGCTGAGCCGGCCG

Downstream 100 bases:

>100_bases
CGATCGGCAGCGCAGCGCAGCGCAGCGCCGCGGCGCGCGCCGACACTGAACCGGCCGCCCGGCGGCCAGCCAGGAGAGAG
CAATGAAGACGAGATGGGCA

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 816; Mature: 816

Protein sequence:

>816_residues
MKPDTGSRRRPPGRRFLLEWLAIGVLGVAAVLAGVAWQATASIDRLIYDHLLAARRLAPDPAIVVVEIDNPSLERLGRWP
WPRSVHAQLLERLAQARPAAVVYDVLFTEASPDDAQLAAALARVPTWLPVLLGPENAAGARALTLPVPPLAARAAGMGHI
NFEVDPDGIVRSVAPTESDGRRDWPQLMLAVARGITRAAAPAAGAALAASEAGPSRQGATPAGAMPHASRFAASLPGGRY
LIPFSRGTPAYSSCSLADVLAGKVPDAALRGKVIVVGVTAAGLYDRFATPISGEFGPLPGVYLHANVLDMLLTGRAISPV
SRGWLCLASLPPLAALLAGILLLSPRRALLLALSVAALSVAGSAALLYGARLWLTPAPAILGLIVVYPTWNWRRLDMTMA
YLRDELERLAAEPHLLPESPRASGARAEFGGDPLERQMNLMAQAARRVQDMKRFVWDSLDSVPEPIFVTDVAGIVLIANH
AARRYCARLRAASPEGRPLPAALGELAFVKSVAHPEREPDLRAAWPDALDPTRGEAPALLASGLEVRDADGLDHLLRYAP
CTNAEGQAIGWIAGLVDVTALHAAERQREEALHLLSHDMRSPQASILALVRTERQRRDAGPAQRELLARIERHAQRALTL
ADEFVQLARAESQTYRIDVVNLADLLLDASDEVWPQAQAKRIRIDTALGEAPCWIGAERSLMTRALVNLLSNAIKYSPAD
TLVRCTLAFTEAPPRVTCTIRDQGYGIAPEHQRHLFERFRRFHAGERPEIAGTGLGMVFVKTVVTRHGGGIAVDSAPGRG
TAIAITLPRLTDVADP

Sequences:

>Translated_816_residues
MKPDTGSRRRPPGRRFLLEWLAIGVLGVAAVLAGVAWQATASIDRLIYDHLLAARRLAPDPAIVVVEIDNPSLERLGRWP
WPRSVHAQLLERLAQARPAAVVYDVLFTEASPDDAQLAAALARVPTWLPVLLGPENAAGARALTLPVPPLAARAAGMGHI
NFEVDPDGIVRSVAPTESDGRRDWPQLMLAVARGITRAAAPAAGAALAASEAGPSRQGATPAGAMPHASRFAASLPGGRY
LIPFSRGTPAYSSCSLADVLAGKVPDAALRGKVIVVGVTAAGLYDRFATPISGEFGPLPGVYLHANVLDMLLTGRAISPV
SRGWLCLASLPPLAALLAGILLLSPRRALLLALSVAALSVAGSAALLYGARLWLTPAPAILGLIVVYPTWNWRRLDMTMA
YLRDELERLAAEPHLLPESPRASGARAEFGGDPLERQMNLMAQAARRVQDMKRFVWDSLDSVPEPIFVTDVAGIVLIANH
AARRYCARLRAASPEGRPLPAALGELAFVKSVAHPEREPDLRAAWPDALDPTRGEAPALLASGLEVRDADGLDHLLRYAP
CTNAEGQAIGWIAGLVDVTALHAAERQREEALHLLSHDMRSPQASILALVRTERQRRDAGPAQRELLARIERHAQRALTL
ADEFVQLARAESQTYRIDVVNLADLLLDASDEVWPQAQAKRIRIDTALGEAPCWIGAERSLMTRALVNLLSNAIKYSPAD
TLVRCTLAFTEAPPRVTCTIRDQGYGIAPEHQRHLFERFRRFHAGERPEIAGTGLGMVFVKTVVTRHGGGIAVDSAPGRG
TAIAITLPRLTDVADP
>Mature_816_residues
MKPDTGSRRRPPGRRFLLEWLAIGVLGVAAVLAGVAWQATASIDRLIYDHLLAARRLAPDPAIVVVEIDNPSLERLGRWP
WPRSVHAQLLERLAQARPAAVVYDVLFTEASPDDAQLAAALARVPTWLPVLLGPENAAGARALTLPVPPLAARAAGMGHI
NFEVDPDGIVRSVAPTESDGRRDWPQLMLAVARGITRAAAPAAGAALAASEAGPSRQGATPAGAMPHASRFAASLPGGRY
LIPFSRGTPAYSSCSLADVLAGKVPDAALRGKVIVVGVTAAGLYDRFATPISGEFGPLPGVYLHANVLDMLLTGRAISPV
SRGWLCLASLPPLAALLAGILLLSPRRALLLALSVAALSVAGSAALLYGARLWLTPAPAILGLIVVYPTWNWRRLDMTMA
YLRDELERLAAEPHLLPESPRASGARAEFGGDPLERQMNLMAQAARRVQDMKRFVWDSLDSVPEPIFVTDVAGIVLIANH
AARRYCARLRAASPEGRPLPAALGELAFVKSVAHPEREPDLRAAWPDALDPTRGEAPALLASGLEVRDADGLDHLLRYAP
CTNAEGQAIGWIAGLVDVTALHAAERQREEALHLLSHDMRSPQASILALVRTERQRRDAGPAQRELLARIERHAQRALTL
ADEFVQLARAESQTYRIDVVNLADLLLDASDEVWPQAQAKRIRIDTALGEAPCWIGAERSLMTRALVNLLSNAIKYSPAD
TLVRCTLAFTEAPPRVTCTIRDQGYGIAPEHQRHLFERFRRFHAGERPEIAGTGLGMVFVKTVVTRHGGGIAVDSAPGRG
TAIAITLPRLTDVADP

Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH and ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF [H]

COG id: COG4252

COG function: function code T; Predicted transmembrane sensor domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1786600, Length=237, Percent_Identity=25.7383966244726, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1786783, Length=221, Percent_Identity=29.4117647058824, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788713, Length=373, Percent_Identity=23.3243967828418, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1789149, Length=228, Percent_Identity=26.7543859649123, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1790346, Length=232, Percent_Identity=25, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1788549, Length=438, Percent_Identity=22.8310502283105, Blast_Score=77, Evalue=5e-15,
Organism=Escherichia coli, GI1786912, Length=239, Percent_Identity=27.6150627615063, Blast_Score=74, Evalue=5e-14,
Organism=Escherichia coli, GI1790436, Length=239, Percent_Identity=26.7782426778243, Blast_Score=73, Evalue=8e-14,
Organism=Escherichia coli, GI145693157, Length=232, Percent_Identity=21.551724137931, Blast_Score=66, Evalue=9e-12,
Organism=Escherichia coli, GI1787894, Length=129, Percent_Identity=31.0077519379845, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 87543; Mature: 87543

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPDTGSRRRPPGRRFLLEWLAIGVLGVAAVLAGVAWQATASIDRLIYDHLLAARRLAPD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PAIVVVEIDNPSLERLGRWPWPRSVHAQLLERLAQARPAAVVYDVLFTEASPDDAQLAAA
CCEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHEEHHHHHCCCCCCHHHHHHH
LARVPTWLPVLLGPENAAGARALTLPVPPLAARAAGMGHINFEVDPDGIVRSVAPTESDG
HHHCCCCCEEEECCCCCCCCEEEEECCCCHHHHHCCCCEEEEEECCCHHHHCCCCCCCCC
RRDWPQLMLAVARGITRAAAPAAGAALAASEAGPSRQGATPAGAMPHASRFAASLPGGRY
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEE
LIPFSRGTPAYSSCSLADVLAGKVPDAALRGKVIVVGVTAAGLYDRFATPISGEFGPLPG
EEEECCCCCCCCCCCHHHHHHCCCCCHHHCCCEEEEEECHHHHHHHHCCCCCCCCCCCCC
VYLHANVLDMLLTGRAISPVSRGWLCLASLPPLAALLAGILLLSPRRALLLALSVAALSV
EEEHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AGSAALLYGARLWLTPAPAILGLIVVYPTWNWRRLDMTMAYLRDELERLAAEPHLLPESP
CCCHHHHHCCHHEECCCHHHEEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCC
RASGARAEFGGDPLERQMNLMAQAARRVQDMKRFVWDSLDSVPEPIFVTDVAGIVLIANH
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHH
AARRYCARLRAASPEGRPLPAALGELAFVKSVAHPEREPDLRAAWPDALDPTRGEAPALL
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
ASGLEVRDADGLDHLLRYAPCTNAEGQAIGWIAGLVDVTALHAAERQREEALHLLSHDMR
HCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPQASILALVRTERQRRDAGPAQRELLARIERHAQRALTLADEFVQLARAESQTYRIDVV
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHH
NLADLLLDASDEVWPQAQAKRIRIDTALGEAPCWIGAERSLMTRALVNLLSNAIKYSPAD
HHHHHHHCCCCCCCCCHHHCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH
TLVRCTLAFTEAPPRVTCTIRDQGYGIAPEHQRHLFERFRRFHAGERPEIAGTGLGMVFV
HHEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
KTVVTRHGGGIAVDSAPGRGTAIAITLPRLTDVADP
HHHHHHCCCCEEEECCCCCCCEEEEEECCHHCCCCC
>Mature Secondary Structure
MKPDTGSRRRPPGRRFLLEWLAIGVLGVAAVLAGVAWQATASIDRLIYDHLLAARRLAPD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PAIVVVEIDNPSLERLGRWPWPRSVHAQLLERLAQARPAAVVYDVLFTEASPDDAQLAAA
CCEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHEEHHHHHCCCCCCHHHHHHH
LARVPTWLPVLLGPENAAGARALTLPVPPLAARAAGMGHINFEVDPDGIVRSVAPTESDG
HHHCCCCCEEEECCCCCCCCEEEEECCCCHHHHHCCCCEEEEEECCCHHHHCCCCCCCCC
RRDWPQLMLAVARGITRAAAPAAGAALAASEAGPSRQGATPAGAMPHASRFAASLPGGRY
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEE
LIPFSRGTPAYSSCSLADVLAGKVPDAALRGKVIVVGVTAAGLYDRFATPISGEFGPLPG
EEEECCCCCCCCCCCHHHHHHCCCCCHHHCCCEEEEEECHHHHHHHHCCCCCCCCCCCCC
VYLHANVLDMLLTGRAISPVSRGWLCLASLPPLAALLAGILLLSPRRALLLALSVAALSV
EEEHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AGSAALLYGARLWLTPAPAILGLIVVYPTWNWRRLDMTMAYLRDELERLAAEPHLLPESP
CCCHHHHHCCHHEECCCHHHEEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCC
RASGARAEFGGDPLERQMNLMAQAARRVQDMKRFVWDSLDSVPEPIFVTDVAGIVLIANH
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHH
AARRYCARLRAASPEGRPLPAALGELAFVKSVAHPEREPDLRAAWPDALDPTRGEAPALL
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
ASGLEVRDADGLDHLLRYAPCTNAEGQAIGWIAGLVDVTALHAAERQREEALHLLSHDMR
HCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPQASILALVRTERQRRDAGPAQRELLARIERHAQRALTLADEFVQLARAESQTYRIDVV
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHH
NLADLLLDASDEVWPQAQAKRIRIDTALGEAPCWIGAERSLMTRALVNLLSNAIKYSPAD
HHHHHHHCCCCCCCCCHHHCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH
TLVRCTLAFTEAPPRVTCTIRDQGYGIAPEHQRHLFERFRRFHAGERPEIAGTGLGMVFV
HHEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
KTVVTRHGGGIAVDSAPGRGTAIAITLPRLTDVADP
HHHHHHCCCCEEEECCCCCCCEEEEEECCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 9829949; 10878122; 11758928 [H]