Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027771

Identifier: 238027771

GI number: 238027771

Start: 2391507

End: 2392967

Strand: Reverse

Name: 238027771

Synonym: bglu_1g21950

Alternate gene names: NA

Gene position: 2392967-2391507 (Counterclockwise)

Preceding gene: 238027772

Following gene: 238027770

Centisome position: 61.26

GC content: 76.04

Gene sequence:

>1461_bases
GTGAGCGCCACGCGGTTCGCCGCCCGCCGCGCGATCGCGGCGGGCGGGCTGGTGCTGGCCGCCGTCGGCGCGGCCGGTGC
CATCAGCGCGCGCGCCGCCGCGCGCGCGCCGGCCGCCGATGGCGGCCCGCCGGCGAGCCGCGCGAGCGGCGGCACGGCCC
ACCCCCTCGCGACGGTGCCCTACCTGACCCGCGAGGGCGACACCCTCTACGAGATCTCGACGCGTTATCTGCAAGGCCCC
GGCGACTGGCCCCTGGTGGCGCGCCTGAACGGCGTGCCGGCGCCGAAGCGGCTGCAGCGCGGCGTGGTGATCCGCCTGCC
GGCCGCGCGGCTGCGCCGCGAGCGGCTGACCGTGCGCGTCGTCGCGCTGCATGGCGCGGTCGAGCGCGCCGGCCGCGACG
GCGCGTTCGCCGCGCTCGGGGCCAAGGCCACGCTCGGCGAGGGCGACCGCCTGCGCACCGGCAGCGACGGCTTCGTCACG
CTGGAGCTGAGCGACGGCACCCACCTGAGCCTGCCGCCCGACAGCCAGATCGACTTGACCGTGCTGCGCCGCACCGTGCT
GACCGGCGTGCTCGAGCGCGAGTTCGAACTGCGGCGCGGCTCGGTGGACAGCGAGGTCACGCATCTGAAGCGGCCCGACG
ACCGCTTCCAGATCCGCGCGCCGTCGGTGGTGGCCGGCGTGCGCGGCACGCGCTTTCGCGTCGGCTATGACGATGGCGAC
GGCGACGGCGACGGCGACGGCGGGCAGGCGCTCACGCGCGTCGAGGTGCTCGACGGCGCGGTCGGCGTCGAGCCCGATGC
GCCGCGCGCCGCCCGGCGCCGTGCCGCGGCTCCGGGCGCGACGCTGGTGCACGCGAATTTCGGCAGCGTGACGCGGGCCG
GCGGGCAGGTGGGCGCCCCGGTGCCGCTGCTCGAGGCGCCGCGGCTCGCCAGGCCGGGCAAGCTGCAGGACGACGCGCAG
GTCGACTTCGAGATCGTGCCGCTCGACGGCGCGCGGGCCTACCACGTCGAGCTCGCGAGCGACGCCGGCTTGCTCGACCT
GTTGCGCGAGGTGCGGTCCGACACGCCGCGCGTGCGCTTCTCCGATCTGCCCGACGGCCGCTACTTCGTGCGCATCGCCG
CGCTCGACGCGAACGGGCTCGAAGGGCAGGCGCGCGTGTACGGCTTCGAGCGGCGCCGCTTCGGACTGCGCACCGAGGCC
GGCCCGGCCGGCGACGGCTACGCGTTCCGCTGGAATCCGAGCGGCGCGACGGCCGCCGTCACGCGCTACCGCTTCATCCT
GTCCGCCTCGCGCGAGCTGGCCGATCCGATCGTCGATCAGCCGGGGTTGACCGACACGCGCCTCGTGATCGCGCATCTGC
CGCCCGGGCGCTATTACTGGACCGTGATCGCCGAGCAGTTCGTCGACGGCCGCTTCTACGACAAGGCCGGCGCCGTCAAC
AGTTTCACGCTCGCGCGCTGA

Upstream 100 bases:

>100_bases
TGCGCACCAAGCTGGCGCTGCGGCCCGAGAACGGTTATCGCCTCGCGCCGATCTACGGCTACGGCTACCGGCTCGAACGG
CTGCAGCAGGGAGCCGCCGA

Downstream 100 bases:

>100_bases
GCCGGCCGATGAAGCCTGACACCGGCTCCCGGCGGCGCCCCCCCGGCCGGCGCTTTCTCCTCGAATGGCTCGCGATCGGC
GTGCTCGGCGTGGCGGCCGT

Product: LysM domain-containing protein

Products: NA

Alternate protein names: LysM Domain-Containing Protein; LysM Cell Wall-Like Protein; LysM Domain-Containing; LysM Motif-Containing Protein; LysM Domain Protein

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MSATRFAARRAIAAGGLVLAAVGAAGAISARAAARAPAADGGPPASRASGGTAHPLATVPYLTREGDTLYEISTRYLQGP
GDWPLVARLNGVPAPKRLQRGVVIRLPAARLRRERLTVRVVALHGAVERAGRDGAFAALGAKATLGEGDRLRTGSDGFVT
LELSDGTHLSLPPDSQIDLTVLRRTVLTGVLEREFELRRGSVDSEVTHLKRPDDRFQIRAPSVVAGVRGTRFRVGYDDGD
GDGDGDGGQALTRVEVLDGAVGVEPDAPRAARRRAAAPGATLVHANFGSVTRAGGQVGAPVPLLEAPRLARPGKLQDDAQ
VDFEIVPLDGARAYHVELASDAGLLDLLREVRSDTPRVRFSDLPDGRYFVRIAALDANGLEGQARVYGFERRRFGLRTEA
GPAGDGYAFRWNPSGATAAVTRYRFILSASRELADPIVDQPGLTDTRLVIAHLPPGRYYWTVIAEQFVDGRFYDKAGAVN
SFTLAR

Sequences:

>Translated_486_residues
MSATRFAARRAIAAGGLVLAAVGAAGAISARAAARAPAADGGPPASRASGGTAHPLATVPYLTREGDTLYEISTRYLQGP
GDWPLVARLNGVPAPKRLQRGVVIRLPAARLRRERLTVRVVALHGAVERAGRDGAFAALGAKATLGEGDRLRTGSDGFVT
LELSDGTHLSLPPDSQIDLTVLRRTVLTGVLEREFELRRGSVDSEVTHLKRPDDRFQIRAPSVVAGVRGTRFRVGYDDGD
GDGDGDGGQALTRVEVLDGAVGVEPDAPRAARRRAAAPGATLVHANFGSVTRAGGQVGAPVPLLEAPRLARPGKLQDDAQ
VDFEIVPLDGARAYHVELASDAGLLDLLREVRSDTPRVRFSDLPDGRYFVRIAALDANGLEGQARVYGFERRRFGLRTEA
GPAGDGYAFRWNPSGATAAVTRYRFILSASRELADPIVDQPGLTDTRLVIAHLPPGRYYWTVIAEQFVDGRFYDKAGAVN
SFTLAR
>Mature_485_residues
SATRFAARRAIAAGGLVLAAVGAAGAISARAAARAPAADGGPPASRASGGTAHPLATVPYLTREGDTLYEISTRYLQGPG
DWPLVARLNGVPAPKRLQRGVVIRLPAARLRRERLTVRVVALHGAVERAGRDGAFAALGAKATLGEGDRLRTGSDGFVTL
ELSDGTHLSLPPDSQIDLTVLRRTVLTGVLEREFELRRGSVDSEVTHLKRPDDRFQIRAPSVVAGVRGTRFRVGYDDGDG
DGDGDGGQALTRVEVLDGAVGVEPDAPRAARRRAAAPGATLVHANFGSVTRAGGQVGAPVPLLEAPRLARPGKLQDDAQV
DFEIVPLDGARAYHVELASDAGLLDLLREVRSDTPRVRFSDLPDGRYFVRIAALDANGLEGQARVYGFERRRFGLRTEAG
PAGDGYAFRWNPSGATAAVTRYRFILSASRELADPIVDQPGLTDTRLVIAHLPPGRYYWTVIAEQFVDGRFYDKAGAVNS
FTLAR

Specific function: Unknown

COG id: COG4254

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51739; Mature: 51608

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATRFAARRAIAAGGLVLAAVGAAGAISARAAARAPAADGGPPASRASGGTAHPLATVP
CCCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECC
YLTREGDTLYEISTRYLQGPGDWPLVARLNGVPAPKRLQRGVVIRLPAARLRRERLTVRV
EEECCCCEEEEEEHHEECCCCCCCEEEEECCCCCHHHHHCCEEEEECHHHHHHHCEEEEE
VALHGAVERAGRDGAFAALGAKATLGEGDRLRTGSDGFVTLELSDGTHLSLPPDSQIDLT
EEEHHHHHHCCCCCCEEEECCCCCCCCCCCEECCCCCEEEEEECCCCEEECCCCCCCHHH
VLRRTVLTGVLEREFELRRGSVDSEVTHLKRPDDRFQIRAPSVVAGVRGTRFRVGYDDGD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEECCCEEECCCCCEEEEECCCCC
GDGDGDGGQALTRVEVLDGAVGVEPDAPRAARRRAAAPGATLVHANFGSVTRAGGQVGAP
CCCCCCCCHHEEEEEECCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC
VPLLEAPRLARPGKLQDDAQVDFEIVPLDGARAYHVELASDAGLLDLLREVRSDTPRVRF
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEE
SDLPDGRYFVRIAALDANGLEGQARVYGFERRRFGLRTEAGPAGDGYAFRWNPSGATAAV
CCCCCCEEEEEEEEECCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCEEEECCCCCHHHH
TRYRFILSASRELADPIVDQPGLTDTRLVIAHLPPGRYYWTVIAEQFVDGRFYDKAGAVN
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHCCEEECCCCCCC
SFTLAR
CEEECC
>Mature Secondary Structure 
SATRFAARRAIAAGGLVLAAVGAAGAISARAAARAPAADGGPPASRASGGTAHPLATVP
CCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECC
YLTREGDTLYEISTRYLQGPGDWPLVARLNGVPAPKRLQRGVVIRLPAARLRRERLTVRV
EEECCCCEEEEEEHHEECCCCCCCEEEEECCCCCHHHHHCCEEEEECHHHHHHHCEEEEE
VALHGAVERAGRDGAFAALGAKATLGEGDRLRTGSDGFVTLELSDGTHLSLPPDSQIDLT
EEEHHHHHHCCCCCCEEEECCCCCCCCCCCEECCCCCEEEEEECCCCEEECCCCCCCHHH
VLRRTVLTGVLEREFELRRGSVDSEVTHLKRPDDRFQIRAPSVVAGVRGTRFRVGYDDGD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEECCCEEECCCCCEEEEECCCCC
GDGDGDGGQALTRVEVLDGAVGVEPDAPRAARRRAAAPGATLVHANFGSVTRAGGQVGAP
CCCCCCCCHHEEEEEECCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC
VPLLEAPRLARPGKLQDDAQVDFEIVPLDGARAYHVELASDAGLLDLLREVRSDTPRVRF
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEE
SDLPDGRYFVRIAALDANGLEGQARVYGFERRRFGLRTEAGPAGDGYAFRWNPSGATAAV
CCCCCCEEEEEEEEECCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCEEEECCCCCHHHH
TRYRFILSASRELADPIVDQPGLTDTRLVIAHLPPGRYYWTVIAEQFVDGRFYDKAGAVN
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHCCEEECCCCCCC
SFTLAR
CEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA