| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027686
Identifier: 238027686
GI number: 238027686
Start: 2298887
End: 2299579
Strand: Direct
Name: 238027686
Synonym: bglu_1g21070
Alternate gene names: NA
Gene position: 2298887-2299579 (Clockwise)
Preceding gene: 238027685
Following gene: 238027687
Centisome position: 58.85
GC content: 67.97
Gene sequence:
>693_bases ATGGGCTTCCCCAACGCAGTACGTCTTCAGCCCGAGGTCGGCGTGCCGGGCACGCGTGCCTCGATGAATCCGATCTCGGT CATCTCGCGCGTCGCGCAGACGCCCGTTACCGTGGGCCGCTTCGTCTGGCCCGGTACCGACACCGACGGTCAGGTGCAGA ACACCGGCGCCGGCAAGGTGCTTGGCTTCGCGATCACCGACCAGGTTGGCGTCATCCCGAACTACCTGCAGGAATACAGC ATGGTCGTGCCCGCAGGCATGGCCGTGCAGGTGGCCGAACAGGGTGAGTGGTTCGCCTCGTCGGCCAACGTCGCCACGCT CGGCCAGAAGGTCTACGCGAACTACGGCGACGGCTCGCTGTCGTTCGGCGCGACCGGCTCCGCGTCGACTAACGCCGGCA TCACCGCGAACACGGCATCCAACACGACGCTGACCGTGACGGCCAATACCGGCGCGCCGATCCAGGTCGGGCAACCGGTC AGCGGGTCCGGCATCCCGGCCGGCACGTACATCGCGGCCTTCGGAACGGGCACCGGCGGCGCCGGCACCTACACGCTCAG CCAAGCCGCCACGGCGACCGCGACGGGCGTCACCGTCACTTCGACGACGAACGTCGAAACGCAGTTCGTCGTGACGCGCG GCGGCGCGGCGAATGCGGTGATCAAGATCTCGACCTGGAGCAACCTCGCATGA
Upstream 100 bases:
>100_bases CGTCGCCGCACGTTGCGCATGATGCCGCCGGCAGTGCCAAGTTGCTGGAGATGTTCCCGGCACTCGGCAAGATCAACCAC GCGTAAAGGAGCGCGACACC
Downstream 100 bases:
>100_bases AGCTCGCCCAACTGACCGATTACGGGATTCACCTCGCGCATGGCGCCGAGCTGCTGACTCCCGAGGTGCGCGCCCGCGTC GTCGCCGCGATGGACGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MGFPNAVRLQPEVGVPGTRASMNPISVISRVAQTPVTVGRFVWPGTDTDGQVQNTGAGKVLGFAITDQVGVIPNYLQEYS MVVPAGMAVQVAEQGEWFASSANVATLGQKVYANYGDGSLSFGATGSASTNAGITANTASNTTLTVTANTGAPIQVGQPV SGSGIPAGTYIAAFGTGTGGAGTYTLSQAATATATGVTVTSTTNVETQFVVTRGGAANAVIKISTWSNLA
Sequences:
>Translated_230_residues MGFPNAVRLQPEVGVPGTRASMNPISVISRVAQTPVTVGRFVWPGTDTDGQVQNTGAGKVLGFAITDQVGVIPNYLQEYS MVVPAGMAVQVAEQGEWFASSANVATLGQKVYANYGDGSLSFGATGSASTNAGITANTASNTTLTVTANTGAPIQVGQPV SGSGIPAGTYIAAFGTGTGGAGTYTLSQAATATATGVTVTSTTNVETQFVVTRGGAANAVIKISTWSNLA >Mature_229_residues GFPNAVRLQPEVGVPGTRASMNPISVISRVAQTPVTVGRFVWPGTDTDGQVQNTGAGKVLGFAITDQVGVIPNYLQEYSM VVPAGMAVQVAEQGEWFASSANVATLGQKVYANYGDGSLSFGATGSASTNAGITANTASNTTLTVTANTGAPIQVGQPVS GSGIPAGTYIAAFGTGTGGAGTYTLSQAATATATGVTVTSTTNVETQFVVTRGGAANAVIKISTWSNLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23001; Mature: 22870
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFPNAVRLQPEVGVPGTRASMNPISVISRVAQTPVTVGRFVWPGTDTDGQVQNTGAGKV CCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEECEEEECCCCCCCEEECCCCCEE LGFAITDQVGVIPNYLQEYSMVVPAGMAVQVAEQGEWFASSANVATLGQKVYANYGDGSL EEEEECCCCCCCHHHHHHHHEECCCCEEEEEECCCCEEECCCCHHHHCCEEEEECCCCEE SFGATGSASTNAGITANTASNTTLTVTANTGAPIQVGQPVSGSGIPAGTYIAAFGTGTGG ECCCCCCCCCCCCEEEECCCCEEEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCCC AGTYTLSQAATATATGVTVTSTTNVETQFVVTRGGAANAVIKISTWSNLA CCEEEECCCCEEEECCEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCC >Mature Secondary Structure GFPNAVRLQPEVGVPGTRASMNPISVISRVAQTPVTVGRFVWPGTDTDGQVQNTGAGKV CCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEECEEEECCCCCCCEEECCCCCEE LGFAITDQVGVIPNYLQEYSMVVPAGMAVQVAEQGEWFASSANVATLGQKVYANYGDGSL EEEEECCCCCCCHHHHHHHHEECCCCEEEEEECCCCEEECCCCHHHHCCEEEEECCCCEE SFGATGSASTNAGITANTASNTTLTVTANTGAPIQVGQPVSGSGIPAGTYIAAFGTGTGG ECCCCCCCCCCCCEEEECCCCEEEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCCC AGTYTLSQAATATATGVTVTSTTNVETQFVVTRGGAANAVIKISTWSNLA CCEEEECCCCEEEECCEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA