| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027685
Identifier: 238027685
GI number: 238027685
Start: 2297625
End: 2298872
Strand: Direct
Name: 238027685
Synonym: bglu_1g21060
Alternate gene names: NA
Gene position: 2297625-2298872 (Clockwise)
Preceding gene: 238027684
Following gene: 238027686
Centisome position: 58.82
GC content: 61.14
Gene sequence:
>1248_bases GTGTGGATGATGAAGACGAGTAAAGACGAAATTCTGGTCGCTTTTGACAAGGCGACGGTGCGATCTTTCGATAAAGACGG TCGCATGCGTGTGTCGATCAGCCGGATCTCAAAAGCTGGCGTGAACCCGTATTGGGGAAAGGAGATCGTCGGTGGCGAGG AGCTCGGCCTCGACCCGGAGCGCGTCTACTACGTGTTCCGGCCGCCAGAGGAGCTGGAGAAGGCCGCGCCGACGTTCAAC AATCTGCCCATCCTTGCCGAGCACAAGTTCGTCAGTGCGGATTCGCCAGAAAAAGACCTAATTATCGGAACAACTGGTTC AAATGCGCGATTTGACGGTGAATATCTCACGAACGATTTAGCGTTCTGGGACGGCGAATACATCGGAAAAATCGAGTCCG ACGAGCAACGCGAACTGTCCAGTTCCTACCGATATACCGCTATTAAAAAAAGTGGAACCTATAATGGCGCGCATTACGAC ATCGTGATGACGGACATTATCGGGAATCACGTTGCCACCGTTGTCGAGGGGCGCGCCGGCCCTAATGTGCTGGTCGCGGA TTCCCGATTTCAACCTACCGGAAGGGTACGAACCGTGAAGCTGAATCCGAAACAGATGGCGGCCCTCAAGGCCCGGCTGC CGAAGCTGAAGGTCGCGATGGACGAAGGGCTTGACACCGACGGCGTCGTCCAGGCGCTCGAGCAAGTCGTCGAGGAAGTG CAGGAACTGGCCGAGCCGAGCGCCGCCGCAGCAGCCCAGGACGAAGAAGGCTCGTTGCTCGCGAAGCTCAAGGCGCTGAT CGACGAGGCCGGCGCCAGCAAGGCGGCGGCTGACGAGAAAGACGACGACGCGAAGAAGGCAGCGGCCGACGAGGTAGCCG CGCGCGCCGCCGAGGCGAAGAAGGCCGAGGATGCCAAGAACGCCGCCGCGATGGACGCGAAGATCAAGGCCGCCGCCGAC GGCGCGCGCCAGTCGATCGAAAGCCGCTTCCGCGCGGCGGATAAGGTCGCGCCGATCACCGGCCGCGTCGACGCGATGGC GTTCGACTCGGCCGAGGCAATCTACGCCCACGCGCTGAAGGTCGGCGGCATGGACCCCGAGAAGCACGACAAGGCGGCCT ACGCGGGCATCGTCGATGTGCTGATCACGACGAAGTCGCAGCCGTCGCCGCACGTTGCGCATGATGCCGCCGGCAGTGCC AAGTTGCTGGAGATGTTCCCGGCACTCGGCAAGATCAACCACGCGTAA
Upstream 100 bases:
>100_bases AAGGTTTTCGACTTGAAACGGGGGCTTATGATCGACGGCGAATACATTTTCCCCGGCGAGTTGCCGAAGTGCGGATGCGT GGGTGCTCCGATTATTCCGG
Downstream 100 bases:
>100_bases AGGAGCGCGACACCATGGGCTTCCCCAACGCAGTACGTCTTCAGCCCGAGGTCGGCGTGCCGGGCACGCGTGCCTCGATG AATCCGATCTCGGTCATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage-Related Protein; Phage Protein
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MWMMKTSKDEILVAFDKATVRSFDKDGRMRVSISRISKAGVNPYWGKEIVGGEELGLDPERVYYVFRPPEELEKAAPTFN NLPILAEHKFVSADSPEKDLIIGTTGSNARFDGEYLTNDLAFWDGEYIGKIESDEQRELSSSYRYTAIKKSGTYNGAHYD IVMTDIIGNHVATVVEGRAGPNVLVADSRFQPTGRVRTVKLNPKQMAALKARLPKLKVAMDEGLDTDGVVQALEQVVEEV QELAEPSAAAAAQDEEGSLLAKLKALIDEAGASKAAADEKDDDAKKAAADEVAARAAEAKKAEDAKNAAAMDAKIKAAAD GARQSIESRFRAADKVAPITGRVDAMAFDSAEAIYAHALKVGGMDPEKHDKAAYAGIVDVLITTKSQPSPHVAHDAAGSA KLLEMFPALGKINHA
Sequences:
>Translated_415_residues MWMMKTSKDEILVAFDKATVRSFDKDGRMRVSISRISKAGVNPYWGKEIVGGEELGLDPERVYYVFRPPEELEKAAPTFN NLPILAEHKFVSADSPEKDLIIGTTGSNARFDGEYLTNDLAFWDGEYIGKIESDEQRELSSSYRYTAIKKSGTYNGAHYD IVMTDIIGNHVATVVEGRAGPNVLVADSRFQPTGRVRTVKLNPKQMAALKARLPKLKVAMDEGLDTDGVVQALEQVVEEV QELAEPSAAAAAQDEEGSLLAKLKALIDEAGASKAAADEKDDDAKKAAADEVAARAAEAKKAEDAKNAAAMDAKIKAAAD GARQSIESRFRAADKVAPITGRVDAMAFDSAEAIYAHALKVGGMDPEKHDKAAYAGIVDVLITTKSQPSPHVAHDAAGSA KLLEMFPALGKINHA >Mature_415_residues MWMMKTSKDEILVAFDKATVRSFDKDGRMRVSISRISKAGVNPYWGKEIVGGEELGLDPERVYYVFRPPEELEKAAPTFN NLPILAEHKFVSADSPEKDLIIGTTGSNARFDGEYLTNDLAFWDGEYIGKIESDEQRELSSSYRYTAIKKSGTYNGAHYD IVMTDIIGNHVATVVEGRAGPNVLVADSRFQPTGRVRTVKLNPKQMAALKARLPKLKVAMDEGLDTDGVVQALEQVVEEV QELAEPSAAAAAQDEEGSLLAKLKALIDEAGASKAAADEKDDDAKKAAADEVAARAAEAKKAEDAKNAAAMDAKIKAAAD GARQSIESRFRAADKVAPITGRVDAMAFDSAEAIYAHALKVGGMDPEKHDKAAYAGIVDVLITTKSQPSPHVAHDAAGSA KLLEMFPALGKINHA
Specific function: Unknown
COG id: COG3566
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44647; Mature: 44647
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWMMKTSKDEILVAFDKATVRSFDKDGRMRVSISRISKAGVNPYWGKEIVGGEELGLDPE CCCCCCCCCCEEEEECHHHHHHCCCCCCEEEEHHHHHHCCCCCCCCCCCCCCHHCCCCHH RVYYVFRPPEELEKAAPTFNNLPILAEHKFVSADSPEKDLIIGTTGSNARFDGEYLTNDL HEEEEECCHHHHHHHCCCCCCCCEEECCCEECCCCCCCCEEEEECCCCCEECCHHHHCCH AFWDGEYIGKIESDEQRELSSSYRYTAIKKSGTYNGAHYDIVMTDIIGNHVATVVEGRAG HHCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCEEEEEEHHHHCCHHHHHEECCCC PNVLVADSRFQPTGRVRTVKLNPKQMAALKARLPKLKVAMDEGLDTDGVVQALEQVVEEV CCEEEECCCCCCCCCEEEEEECHHHHHHHHHHCCCEEEHHHCCCCHHHHHHHHHHHHHHH QELAEPSAAAAAQDEEGSLLAKLKALIDEAGASKAAADEKDDDAKKAAADEVAARAAEAK HHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KAEDAKNAAAMDAKIKAAADGARQSIESRFRAADKVAPITGRVDAMAFDSAEAIYAHALK HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHH VGGMDPEKHDKAAYAGIVDVLITTKSQPSPHVAHDAAGSAKLLEMFPALGKINHA HCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MWMMKTSKDEILVAFDKATVRSFDKDGRMRVSISRISKAGVNPYWGKEIVGGEELGLDPE CCCCCCCCCCEEEEECHHHHHHCCCCCCEEEEHHHHHHCCCCCCCCCCCCCCHHCCCCHH RVYYVFRPPEELEKAAPTFNNLPILAEHKFVSADSPEKDLIIGTTGSNARFDGEYLTNDL HEEEEECCHHHHHHHCCCCCCCCEEECCCEECCCCCCCCEEEEECCCCCEECCHHHHCCH AFWDGEYIGKIESDEQRELSSSYRYTAIKKSGTYNGAHYDIVMTDIIGNHVATVVEGRAG HHCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCEEEEEEHHHHCCHHHHHEECCCC PNVLVADSRFQPTGRVRTVKLNPKQMAALKARLPKLKVAMDEGLDTDGVVQALEQVVEEV CCEEEECCCCCCCCCEEEEEECHHHHHHHHHHCCCEEEHHHCCCCHHHHHHHHHHHHHHH QELAEPSAAAAAQDEEGSLLAKLKALIDEAGASKAAADEKDDDAKKAAADEVAARAAEAK HHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KAEDAKNAAAMDAKIKAAADGARQSIESRFRAADKVAPITGRVDAMAFDSAEAIYAHALK HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHH VGGMDPEKHDKAAYAGIVDVLITTKSQPSPHVAHDAAGSAKLLEMFPALGKINHA HCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA