| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is marR [C]
Identifier: 238027578
GI number: 238027578
Start: 2185888
End: 2186397
Strand: Direct
Name: marR [C]
Synonym: bglu_1g19960
Alternate gene names: 238027578
Gene position: 2185888-2186397 (Clockwise)
Preceding gene: 238027571
Following gene: 238027579
Centisome position: 55.96
GC content: 65.88
Gene sequence:
>510_bases ATGCCGGACCCTTCCACGCCCCCGCCGGCCGGCCTGTCCGTGTCCGCGTATCCGATCAACGACAGCGTCGGCTACCTGCT TTCGCGCGTGCGCTCGCTGATGACCAACCTCGTCACGCAGCGCACCCAGACCGAGCTCGGCATCACCGGCACCCAGGCCA GCATGTTGTTCATGCTCGCGGTCGGCAAATGCTCGACGGCGGCCGAACTGGCGCGCGAGTACGCGATCGATGCGAGCGCC GTCACACGCCTGCTTGACCGCGTCGAGAAACGCGGCCTGCTCTCGCGCGTGCGCAGCCACGAGGACCGACGCGTGGTGCG CCTCGAACTGACCGACGAGGGCCGCGAACTTGCGGAACGGATGCCGGAAATTTTCATCAGCGTGCTCGATCGCCTGCTCG ACGGCTTCACGCCCGAGGAAGTCGGTTTCCTGAAAAGCATGCTGCGCCGCATTCTGAGCAATTACTGCGGCGAAACCAGC AGCGGCAGCAGCGGCGGCAACGCTTCGTAA
Upstream 100 bases:
>100_bases CGCTCCCCATTTGTCGCCGCGCACCCCGTCGATCTTATTTGCCGCGACAAACAATCGCGCTTATACTGCTGCCTAGTCAA CCATTGCAGAATCAGAGAAT
Downstream 100 bases:
>100_bases CACACGTCTGGGCAATCACTCTCCGATGCATCGACATAAGGAAATCCTTGCAATGTCCACTTTTGAATCACGGGCGGCGG CCATGCCGCGCAAGGGCGTG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Regulatory Protein MarR; Transcriptional Regulator MarR Family Protein; Multiple Antibiotic Resistance Protein MarR; MarR Transcriptional Regulator; Selenocysteine-Containing Oxidoreductase Fusion Protein; Multiple Antibiotic Resistance Protein; Transcriptional Regulators; Transcriptional Regulator Protein MarR Family; Transcriptional Regulator Protein; Transcription Regulator; Multiple Antibiotic Resistance Operon Repressor MarR; Transcriptional Regulator Marr Family; MarR Family Regulatory Helix-Turn-Helix
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MPDPSTPPPAGLSVSAYPINDSVGYLLSRVRSLMTNLVTQRTQTELGITGTQASMLFMLAVGKCSTAAELAREYAIDASA VTRLLDRVEKRGLLSRVRSHEDRRVVRLELTDEGRELAERMPEIFISVLDRLLDGFTPEEVGFLKSMLRRILSNYCGETS SGSSGGNAS
Sequences:
>Translated_169_residues MPDPSTPPPAGLSVSAYPINDSVGYLLSRVRSLMTNLVTQRTQTELGITGTQASMLFMLAVGKCSTAAELAREYAIDASA VTRLLDRVEKRGLLSRVRSHEDRRVVRLELTDEGRELAERMPEIFISVLDRLLDGFTPEEVGFLKSMLRRILSNYCGETS SGSSGGNAS >Mature_168_residues PDPSTPPPAGLSVSAYPINDSVGYLLSRVRSLMTNLVTQRTQTELGITGTQASMLFMLAVGKCSTAAELAREYAIDASAV TRLLDRVEKRGLLSRVRSHEDRRVVRLELTDEGRELAERMPEIFISVLDRLLDGFTPEEVGFLKSMLRRILSNYCGETSS GSSGGNAS
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18467; Mature: 18336
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDPSTPPPAGLSVSAYPINDSVGYLLSRVRSLMTNLVTQRTQTELGITGTQASMLFMLA CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VGKCSTAAELAREYAIDASAVTRLLDRVEKRGLLSRVRSHEDRRVVRLELTDEGRELAER HCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH MPEIFISVLDRLLDGFTPEEVGFLKSMLRRILSNYCGETSSGSSGGNAS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PDPSTPPPAGLSVSAYPINDSVGYLLSRVRSLMTNLVTQRTQTELGITGTQASMLFMLA CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VGKCSTAAELAREYAIDASAVTRLLDRVEKRGLLSRVRSHEDRRVVRLELTDEGRELAER HCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH MPEIFISVLDRLLDGFTPEEVGFLKSMLRRILSNYCGETSSGSSGGNAS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA