Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027570

Identifier: 238027570

GI number: 238027570

Start: 2173349

End: 2175031

Strand: Direct

Name: 238027570

Synonym: bglu_1g19880

Alternate gene names: NA

Gene position: 2173349-2175031 (Clockwise)

Preceding gene: 238027569

Following gene: 238027571

Centisome position: 55.63

GC content: 67.44

Gene sequence:

>1683_bases
ATGCAAACCCCGAAACAGGTTTGGACGCTGCTGTGCGCGCTCGCCGCGACGGCCGCCGCTCCCGCCCAGGCGCAGACCCG
CCCCGCCGGCAACCCGCTCGAATCGCTGCCGCAGATCAGCCCGCCCCAGCGCGCCGCCGTCACGGTCCAGGTCGAGCCGC
AGGCGCAGCAGGTGCAGCAGTTGCTCGCGCGCCATCTCACGCCGGCCACGATCCGCATCGAAGGCGTCAGATCGATTCCG
TTCGAGGAGGTATCGGCGCGCTTCACGCCGCTCGTGGGCAAGGACATCACGATAGGACAACTGATCGAAACCGCGAACGG
CGTGACCAAGCTCTACCAGGACCGCAGCTACGCCCTGTCGTTCGCGTTCGTGCCGGCGCAGACTTTCGAGGACGGCGTGG
TGAGGATCACGGTGGTCGAGGGCTTCGTGTCCGACGTGCAGATCACCGGCAACCCCGGCGCGATGGAGTCGAAGCTGCGC
GCGGTGGCCGCGCACATCACCGCCGACCGGCCGCTGCGGCGCGCCACGTTCGAGCGCTACGTGAACACTTTCGGCCTGCT
GCCCGGCATCACCGTGAAGGCCAACGTGCCGCCGCCGCAGAACACCGACGGCGCGACCACCCTCTCGCTCGACGTCAAGC
GCAAGCCGATCAACGTGAGCAGCGGCATCGCCACCAGCAATCCCGGCGTGCAGGGGCTGTTTACCGTGACCGAAAGCGGC
CTGACCTCGCTCGGTGAGCAACTGAGCCTGTCGGCGCTCGCGCCCAAAGGCCCGAACAACGTGACCTACGTGGCGGCAAG
CGGTTCGGTGCCGATCGGCAGCAATGGCCTCACGGCGCGCGTCGACGCGAGCCATTACCGCGGCAACCCGAGCGACAACC
CGGGCCTGCCCTCCTACGTGAAGCGCACCGTGGTCAACGACAAGCTCGGCGTTTCCGCCTCGTACCCGATCCTGCTGAAC
AACCAGCGCAGCCTGCTCGCCACGGTGTCCGGCTACGCCTCGCACAGCGAAGACCAGTACCGGAACCAGATCGGCGGCCA
GTTCATCGGCCTGCGCTCGCAGGTGCGCGTGCTGCAGGCGCAGATGGACTTCACCAACGTGCGGCCGACCTCGGTCACCA
AGGTCAGCCTCAACGTCGCAAAGGCGTTCGACATTCTCGGCGCGTCGAAATCGGCCGACACCAACATCGCCGGCTCGACG
CCGAGCAACCCGGCCTCGATCACCTTCGTGCGCACCGGCGCGACGCTCGTGCAGACCAACGAGTGGCCGCTCAAGATCGG
CACCACGCTGCAGTTCACGGGCCAGTTCAGCCCGGTCTCGCTGCCCACCACCGAGCAGATCGCGTTCGGCGCGCAGCGCT
TCGCGCTCGGCTACGAGCCCGGCGAAACCTCGGGCGATTCGGGTTGGGGCATGTCCGCCGAGATCAACCGCTCGTTCGCG
CTCGGCCTTGCCTACCTGAAGTCGATCACGCCTTACATCGCCTATGACATGGCGCGCGTCTATCTGCATGCCGGCACGCC
ACAGCCGAACCGGCTCTCGTCGGTCGGCCTCGGCGTGCGCGTGTCGGACGGCCAGCACTACAACATCGACGTCTCGGTCG
CGAAGCCGATCGGCGACGCGCCGATCGAAAGCGCCTCGCGCAGCCCGCGCGTCAATGCGTCGTTCTCCTATCAGTTGAAT
TGA

Upstream 100 bases:

>100_bases
CGGTCATCACAGGTTGCATGAGACGGAGGGCATCGCTCGCGATGTCCTCCGTTTGCAGTGGAAAACTAAAAAGCAGCAGG
CCTACGAGGACTCACCGACA

Downstream 100 bases:

>100_bases
TTCCGGCGGGCGGCCGCGTCGATTAGAGGCACCTCTATCAAACGCGGCGGCCTCTTTCACGTATGCTCAGCGAAGGCTCC
CGGCCCTTGCGAGGCGCGGG

Product: putative exported heme utilisation-like protein

Products: NA

Alternate protein names: Hemolysin Activation/Secretion Protein; Polypeptide-Transport-Associated Domain Protein ShlB-Type; Activation/Secretion Signal Peptide Protein; Hemolysin Activation/Secretion Protein-Like; Exported Protein; POTRA Domain ShlB-Type Family; Hemolysin Activation/Secretion Protein-Like Protein; ShlB-Type Family Protein; Secreted Protein Related Heme Utilisation; OMP85 Family Outer Membrane Protein; Exported Heme Utilisation Related Protein; Heme/Hemopexin Utilization Protein; HlyB Family Hemolysin Activator Protein

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MQTPKQVWTLLCALAATAAAPAQAQTRPAGNPLESLPQISPPQRAAVTVQVEPQAQQVQQLLARHLTPATIRIEGVRSIP
FEEVSARFTPLVGKDITIGQLIETANGVTKLYQDRSYALSFAFVPAQTFEDGVVRITVVEGFVSDVQITGNPGAMESKLR
AVAAHITADRPLRRATFERYVNTFGLLPGITVKANVPPPQNTDGATTLSLDVKRKPINVSSGIATSNPGVQGLFTVTESG
LTSLGEQLSLSALAPKGPNNVTYVAASGSVPIGSNGLTARVDASHYRGNPSDNPGLPSYVKRTVVNDKLGVSASYPILLN
NQRSLLATVSGYASHSEDQYRNQIGGQFIGLRSQVRVLQAQMDFTNVRPTSVTKVSLNVAKAFDILGASKSADTNIAGST
PSNPASITFVRTGATLVQTNEWPLKIGTTLQFTGQFSPVSLPTTEQIAFGAQRFALGYEPGETSGDSGWGMSAEINRSFA
LGLAYLKSITPYIAYDMARVYLHAGTPQPNRLSSVGLGVRVSDGQHYNIDVSVAKPIGDAPIESASRSPRVNASFSYQLN

Sequences:

>Translated_560_residues
MQTPKQVWTLLCALAATAAAPAQAQTRPAGNPLESLPQISPPQRAAVTVQVEPQAQQVQQLLARHLTPATIRIEGVRSIP
FEEVSARFTPLVGKDITIGQLIETANGVTKLYQDRSYALSFAFVPAQTFEDGVVRITVVEGFVSDVQITGNPGAMESKLR
AVAAHITADRPLRRATFERYVNTFGLLPGITVKANVPPPQNTDGATTLSLDVKRKPINVSSGIATSNPGVQGLFTVTESG
LTSLGEQLSLSALAPKGPNNVTYVAASGSVPIGSNGLTARVDASHYRGNPSDNPGLPSYVKRTVVNDKLGVSASYPILLN
NQRSLLATVSGYASHSEDQYRNQIGGQFIGLRSQVRVLQAQMDFTNVRPTSVTKVSLNVAKAFDILGASKSADTNIAGST
PSNPASITFVRTGATLVQTNEWPLKIGTTLQFTGQFSPVSLPTTEQIAFGAQRFALGYEPGETSGDSGWGMSAEINRSFA
LGLAYLKSITPYIAYDMARVYLHAGTPQPNRLSSVGLGVRVSDGQHYNIDVSVAKPIGDAPIESASRSPRVNASFSYQLN
>Mature_560_residues
MQTPKQVWTLLCALAATAAAPAQAQTRPAGNPLESLPQISPPQRAAVTVQVEPQAQQVQQLLARHLTPATIRIEGVRSIP
FEEVSARFTPLVGKDITIGQLIETANGVTKLYQDRSYALSFAFVPAQTFEDGVVRITVVEGFVSDVQITGNPGAMESKLR
AVAAHITADRPLRRATFERYVNTFGLLPGITVKANVPPPQNTDGATTLSLDVKRKPINVSSGIATSNPGVQGLFTVTESG
LTSLGEQLSLSALAPKGPNNVTYVAASGSVPIGSNGLTARVDASHYRGNPSDNPGLPSYVKRTVVNDKLGVSASYPILLN
NQRSLLATVSGYASHSEDQYRNQIGGQFIGLRSQVRVLQAQMDFTNVRPTSVTKVSLNVAKAFDILGASKSADTNIAGST
PSNPASITFVRTGATLVQTNEWPLKIGTTLQFTGQFSPVSLPTTEQIAFGAQRFALGYEPGETSGDSGWGMSAEINRSFA
LGLAYLKSITPYIAYDMARVYLHAGTPQPNRLSSVGLGVRVSDGQHYNIDVSVAKPIGDAPIESASRSPRVNASFSYQLN

Specific function: Unknown

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59478; Mature: 59478

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTPKQVWTLLCALAATAAAPAQAQTRPAGNPLESLPQISPPQRAAVTVQVEPQAQQVQQ
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCHHHHHHH
LLARHLTPATIRIEGVRSIPFEEVSARFTPLVGKDITIGQLIETANGVTKLYQDRSYALS
HHHHHCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
FAFVPAQTFEDGVVRITVVEGFVSDVQITGNPGAMESKLRAVAAHITADRPLRRATFERY
EEEEECCCCCCCEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
VNTFGLLPGITVKANVPPPQNTDGATTLSLDVKRKPINVSSGIATSNPGVQGLFTVTESG
HHHHCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHH
LTSLGEQLSLSALAPKGPNNVTYVAASGSVPIGSNGLTARVDASHYRGNPSDNPGLPSYV
HHHHHHHHEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEHHHCCCCCCCCCCCHHHH
KRTVVNDKLGVSASYPILLNNQRSLLATVSGYASHSEDQYRNQIGGQFIGLRSQVRVLQA
HHHHHCCCCCCCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHCCEEECHHHHHHHHHH
QMDFTNVRPTSVTKVSLNVAKAFDILGASKSADTNIAGSTPSNPASITFVRTGATLVQTN
HHCCCCCCCCEEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECC
EWPLKIGTTLQFTGQFSPVSLPTTEQIAFGAQRFALGYEPGETSGDSGWGMSAEINRSFA
CCCEEECCEEEEECCCCCCCCCCHHHHHHCHHHEEEECCCCCCCCCCCCCCCCCCCCHHH
LGLAYLKSITPYIAYDMARVYLHAGTPQPNRLSSVGLGVRVSDGQHYNIDVSVAKPIGDA
HHHHHHHHCCHHHHHHEEEEEEECCCCCCCCHHHCCCEEEECCCCEEEEEEEEECCCCCC
PIESASRSPRVNASFSYQLN
CCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MQTPKQVWTLLCALAATAAAPAQAQTRPAGNPLESLPQISPPQRAAVTVQVEPQAQQVQQ
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCHHHHHHH
LLARHLTPATIRIEGVRSIPFEEVSARFTPLVGKDITIGQLIETANGVTKLYQDRSYALS
HHHHHCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
FAFVPAQTFEDGVVRITVVEGFVSDVQITGNPGAMESKLRAVAAHITADRPLRRATFERY
EEEEECCCCCCCEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
VNTFGLLPGITVKANVPPPQNTDGATTLSLDVKRKPINVSSGIATSNPGVQGLFTVTESG
HHHHCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHH
LTSLGEQLSLSALAPKGPNNVTYVAASGSVPIGSNGLTARVDASHYRGNPSDNPGLPSYV
HHHHHHHHEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEHHHCCCCCCCCCCCHHHH
KRTVVNDKLGVSASYPILLNNQRSLLATVSGYASHSEDQYRNQIGGQFIGLRSQVRVLQA
HHHHHCCCCCCCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHCCEEECHHHHHHHHHH
QMDFTNVRPTSVTKVSLNVAKAFDILGASKSADTNIAGSTPSNPASITFVRTGATLVQTN
HHCCCCCCCCEEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECC
EWPLKIGTTLQFTGQFSPVSLPTTEQIAFGAQRFALGYEPGETSGDSGWGMSAEINRSFA
CCCEEECCEEEEECCCCCCCCCCHHHHHHCHHHEEEECCCCCCCCCCCCCCCCCCCCHHH
LGLAYLKSITPYIAYDMARVYLHAGTPQPNRLSSVGLGVRVSDGQHYNIDVSVAKPIGDA
HHHHHHHHCCHHHHHHEEEEEEECCCCCCCCHHHCCCEEEECCCCEEEEEEEEECCCCCC
PIESASRSPRVNASFSYQLN
CCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA