Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027568

Identifier: 238027568

GI number: 238027568

Start: 2170095

End: 2171795

Strand: Direct

Name: 238027568

Synonym: bglu_1g19860

Alternate gene names: NA

Gene position: 2170095-2171795 (Clockwise)

Preceding gene: 238027552

Following gene: 238027569

Centisome position: 55.55

GC content: 75.78

Gene sequence:

>1701_bases
ATGGATACCCAAACGATTACCCAAGGCATGCTCCGGACCACGCTGATCGCGGCCACCGCGGCAGCCATGCTTTCCCTCTC
CGCCTGCGGCGGTTCCGGTTCGCTGAGCCAGGGCACCGGCGGCTCGAGCTCCGGCACTTCCGGCACTTCCGGCACGAATA
CGCCGCAAGGCACGGGCTCCTCCTCGGGTATCAGCGGCACCTCGTCGTCCGGCACCAGCTCCGGCACCAGCGGCACCTCC
TCGTCGGGCACCAGTTCCGGCACCAGCGGCACCTCGTCGTCGGGCAGCAGCGGCACCTCCTCGTCCGGCACCAGCGGCAC
GAGTTCGAGCAACGCGGTAGGCAGCGTGGTCGCCAGTACCAGCAACGTGGTGTCGAGCGTCGGCACCACCGTGTCGGGCC
TCGGCACGGTGATCGGCAGCCAGTCGGTGCCGGGCCTCGGCAGCGCGCCGACCCAGGCGCTCGGCAGCGTGGTGGGCAGT
GTCGGCGGCGCGGTCAGCGCGCTCGGCAACGGCCTCGCGGGCGGGCTCGGCCAGCTCGGCGCGACCGCCAACCCGCTCGG
CACCACGCTCGGCTCGACCGGCAACGTGGTGTCGCAGCTCGGCAACGCCGTGACCGGCACCGGCAACCTCGTGACGAGCC
TGGGCAGCGGCCCGCTCACGCCGCTCGCCCCGGTCACCTCGACCGTCGGCGGCCTGGTCTCGACGCTCGGCACCACGGTG
GCCAACGGCGGCGCGACGCTCGGCAACGTATTGAGCACCGGTCCCGTGCAGCAGATCACGCAGACCGTCAGCTCGGCGAT
CACGCCGATCACCGCGGTGGTCGCCAACACGACGCAGACGGTCGGCAACGCGACCGGACTGGGCGCGCCGGTCAACACGC
TGCTGGGCACGATCGGCGGCAGCCTGAACCAGGCCGGCTCGCTGATCGCCACGAAGGGCGGCGGCAACCCCGTCACCGCG
GGCCTCGGCTCGACCGTGTCGGCCACCGGCAACACCGTCGCCTCGCTCGGCGGCCTGGTCACGGGCGGCAGCGGCGGCAA
CCCGCTGGCACCGGTCAGCTCGGTGGTGGGCGGCCTCGCCAACACGCTCGGCGGCCTCGGCGGCACCAGCGGCGGCAGCG
GCCCGCTGGCACCGGTCACCGGGCTCGTTTCGTCGGTTACCGGCGCGCTCGGCGGCGTCACGGGCGGGGCCGCAGGCGGT
AGCGCGAGCGGCCTGCTGGCACCCGTCACGGGTCTCGCCTCGTCGGTCACCGGCGCACTCGGCGGCGCCACGGGCGGGGC
CGCAGGCGGCGCCGCGGGCGGTGCGCTGGCACCCGTCACCGGGCTCGTCTCGTCGGTCACCGGCGCGCTCGGCGGCGCCA
CGGGCGGGGCTGCAGGCGGCGCCGCGGGCGGCGCGCTGGCACCCGTCACCGGGCTCGTCTCGTCGGTCACCGGCGCACTC
GGCGGCGCCACGGGAGGCGGCTCGGCGGGCGGCAGCGCCAGTGGCCTGCTCGCGCCGGTCACCGGCGTGCTGGCGGGCGT
GACGGGCGCAGCGGGCGGTGCGGCCGCCGGCGCGACCAGCGCCGCCACCTCCGGCGCGGCCACGGTCGCGACCGGCCTGA
GCGGGTCGAGCAACGGCGCCGCGACGAAAGGCTCGGGCGGCGGCCTGCTGGCACCCGTGACCTCGCTGGTGGGCGGGCTG
CTCGGCGGCGGCAAGAAATAA

Upstream 100 bases:

>100_bases
AGGCAGCGACTTTCGCATCGACTTTTCAATCGGGTGGCACGAGTGTTGCAGAGTGTATCTCGCGGTAACACAGATCACAC
AACACCACTGCGAGGACGAC

Downstream 100 bases:

>100_bases
CGGCGTTTCGTCGGTCAAGTCAATCAAATCGCGTCAGGAGACCCATCATGCAACCGATTCACCCGCTCTCTTCCCCGACC
GCCTCGTCGGCGCTGCGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Hemagglutinin-Related Transmembrane Protein; Triple Helix Repeat-Containing Collagen; Collagen Triple Helix Repeat; Hemagglutinin Transmembrane Protein

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MDTQTITQGMLRTTLIAATAAAMLSLSACGGSGSLSQGTGGSSSGTSGTSGTNTPQGTGSSSGISGTSSSGTSSGTSGTS
SSGTSSGTSGTSSSGSSGTSSSGTSGTSSSNAVGSVVASTSNVVSSVGTTVSGLGTVIGSQSVPGLGSAPTQALGSVVGS
VGGAVSALGNGLAGGLGQLGATANPLGTTLGSTGNVVSQLGNAVTGTGNLVTSLGSGPLTPLAPVTSTVGGLVSTLGTTV
ANGGATLGNVLSTGPVQQITQTVSSAITPITAVVANTTQTVGNATGLGAPVNTLLGTIGGSLNQAGSLIATKGGGNPVTA
GLGSTVSATGNTVASLGGLVTGGSGGNPLAPVSSVVGGLANTLGGLGGTSGGSGPLAPVTGLVSSVTGALGGVTGGAAGG
SASGLLAPVTGLASSVTGALGGATGGAAGGAAGGALAPVTGLVSSVTGALGGATGGAAGGAAGGALAPVTGLVSSVTGAL
GGATGGGSAGGSASGLLAPVTGVLAGVTGAAGGAAAGATSAATSGAATVATGLSGSSNGAATKGSGGGLLAPVTSLVGGL
LGGGKK

Sequences:

>Translated_566_residues
MDTQTITQGMLRTTLIAATAAAMLSLSACGGSGSLSQGTGGSSSGTSGTSGTNTPQGTGSSSGISGTSSSGTSSGTSGTS
SSGTSSGTSGTSSSGSSGTSSSGTSGTSSSNAVGSVVASTSNVVSSVGTTVSGLGTVIGSQSVPGLGSAPTQALGSVVGS
VGGAVSALGNGLAGGLGQLGATANPLGTTLGSTGNVVSQLGNAVTGTGNLVTSLGSGPLTPLAPVTSTVGGLVSTLGTTV
ANGGATLGNVLSTGPVQQITQTVSSAITPITAVVANTTQTVGNATGLGAPVNTLLGTIGGSLNQAGSLIATKGGGNPVTA
GLGSTVSATGNTVASLGGLVTGGSGGNPLAPVSSVVGGLANTLGGLGGTSGGSGPLAPVTGLVSSVTGALGGVTGGAAGG
SASGLLAPVTGLASSVTGALGGATGGAAGGAAGGALAPVTGLVSSVTGALGGATGGAAGGAAGGALAPVTGLVSSVTGAL
GGATGGGSAGGSASGLLAPVTGVLAGVTGAAGGAAAGATSAATSGAATVATGLSGSSNGAATKGSGGGLLAPVTSLVGGL
LGGGKK
>Mature_566_residues
MDTQTITQGMLRTTLIAATAAAMLSLSACGGSGSLSQGTGGSSSGTSGTSGTNTPQGTGSSSGISGTSSSGTSSGTSGTS
SSGTSSGTSGTSSSGSSGTSSSGTSGTSSSNAVGSVVASTSNVVSSVGTTVSGLGTVIGSQSVPGLGSAPTQALGSVVGS
VGGAVSALGNGLAGGLGQLGATANPLGTTLGSTGNVVSQLGNAVTGTGNLVTSLGSGPLTPLAPVTSTVGGLVSTLGTTV
ANGGATLGNVLSTGPVQQITQTVSSAITPITAVVANTTQTVGNATGLGAPVNTLLGTIGGSLNQAGSLIATKGGGNPVTA
GLGSTVSATGNTVASLGGLVTGGSGGNPLAPVSSVVGGLANTLGGLGGTSGGSGPLAPVTGLVSSVTGALGGVTGGAAGG
SASGLLAPVTGLASSVTGALGGATGGAAGGAAGGALAPVTGLVSSVTGALGGATGGAAGGAAGGALAPVTGLVSSVTGAL
GGATGGGSAGGSASGLLAPVTGVLAGVTGAAGGAAAGATSAATSGAATVATGLSGSSNGAATKGSGGGLLAPVTSLVGGL
LGGGKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48997; Mature: 48997

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTQTITQGMLRTTLIAATAAAMLSLSACGGSGSLSQGTGGSSSGTSGTSGTNTPQGTGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSGISGTSSSGTSSGTSGTSSSGTSSGTSGTSSSGSSGTSSSGTSGTSSSNAVGSVVAST
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
SNVVSSVGTTVSGLGTVIGSQSVPGLGSAPTQALGSVVGSVGGAVSALGNGLAGGLGQLG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCHHHCC
ATANPLGTTLGSTGNVVSQLGNAVTGTGNLVTSLGSGPLTPLAPVTSTVGGLVSTLGTTV
CCCCCHHHHCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ANGGATLGNVLSTGPVQQITQTVSSAITPITAVVANTTQTVGNATGLGAPVNTLLGTIGG
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
SLNQAGSLIATKGGGNPVTAGLGSTVSATGNTVASLGGLVTGGSGGNPLAPVSSVVGGLA
CHHHCCCEEEECCCCCCEECCCCCCCCCCCCHHHHHCCEEECCCCCCCCHHHHHHHHHHH
NTLGGLGGTSGGSGPLAPVTGLVSSVTGALGGVTGGAAGGSASGLLAPVTGLASSVTGAL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
GGATGGAAGGAAGGALAPVTGLVSSVTGALGGATGGAAGGAAGGALAPVTGLVSSVTGAL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
GGATGGGSAGGSASGLLAPVTGVLAGVTGAAGGAAAGATSAATSGAATVATGLSGSSNGA
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCCCC
ATKGSGGGLLAPVTSLVGGLLGGGKK
CCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDTQTITQGMLRTTLIAATAAAMLSLSACGGSGSLSQGTGGSSSGTSGTSGTNTPQGTGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSGISGTSSSGTSSGTSGTSSSGTSSGTSGTSSSGSSGTSSSGTSGTSSSNAVGSVVAST
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
SNVVSSVGTTVSGLGTVIGSQSVPGLGSAPTQALGSVVGSVGGAVSALGNGLAGGLGQLG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCHHHCC
ATANPLGTTLGSTGNVVSQLGNAVTGTGNLVTSLGSGPLTPLAPVTSTVGGLVSTLGTTV
CCCCCHHHHCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ANGGATLGNVLSTGPVQQITQTVSSAITPITAVVANTTQTVGNATGLGAPVNTLLGTIGG
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
SLNQAGSLIATKGGGNPVTAGLGSTVSATGNTVASLGGLVTGGSGGNPLAPVSSVVGGLA
CHHHCCCEEEECCCCCCEECCCCCCCCCCCCHHHHHCCEEECCCCCCCCHHHHHHHHHHH
NTLGGLGGTSGGSGPLAPVTGLVSSVTGALGGVTGGAAGGSASGLLAPVTGLASSVTGAL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
GGATGGAAGGAAGGALAPVTGLVSSVTGALGGATGGAAGGAAGGALAPVTGLVSSVTGAL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
GGATGGGSAGGSASGLLAPVTGVLAGVTGAAGGAAAGATSAATSGAATVATGLSGSSNGA
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCCCC
ATKGSGGGLLAPVTSLVGGLLGGGKK
CCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA