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The map label for this gene is yecS [H]

Identifier: 238027538

GI number: 238027538

Start: 2135980

End: 2136639

Strand: Direct

Name: yecS [H]

Synonym: bglu_1g19560

Alternate gene names: 238027538

Gene position: 2135980-2136639 (Clockwise)

Preceding gene: 238027537

Following gene: 238027548

Centisome position: 54.68

GC content: 67.12

Gene sequence:

>660_bases
ATGTCGATCACTTCCCTGCTCGTCGATTCGCTGCCTGTGCTTGCGCAGGGCGCGGTATTGACCGTCAAGTTCGCCGTCCT
GTCGATGGTGTTCGGCCTCATCGCCGCCGTCGTGCTCGCGCTGATGGGCATCGCCCACAGCCGCGTGCTCAATGCCATCG
CACGCGTCTACGTGAGCCTGATGCGCGGCACGCCGCTGCTGGTGCAGATCTTCGTCATCTATTACGGCCTGCCGAGCCTG
GGCATCTCGCTCGACCCGACGCCGGCCGGCGTGATCGCGCTGTCGGCGAACGTCGCGGCCTACATGTCCGAAAGCATGCG
CGGCGCGATCAACGGCATCGAGAGCGGCCAGTGGCTCGCCTCGTACAGCCTCGGCCTGTCGTGGAGCCAGACGCTGCGCT
ACGTGATCGGCCCGCAGGCGCTGCGCATCGCCGTGCCGAGCCTGTCGAACAGCCTCATCAGCCTGATCAAGGACACCTCG
CTGGTCTCGGTGATCACCGTCACGGAACTGCTGCGCAGCGCCCAGGAGATCATCGCCTCGACCTACCAGCCGCTGCCGCT
CTATCTGGCGGCCGCGGCCGTGTACTGGGTGCTGTGCCAGATCCTCGAGTGGGTGCAGCGCTGGTGCGAGCGCCGGCTCG
CGCTGCCGGGGCGGTACTGA

Upstream 100 bases:

>100_bases
CAAGCACGCGCTTGCAGGGCGGCACCGGCGACGGTGCCGCCCTTCGCTTTGTATCGTCGGTTTATGATGGCGCTTTTCGC
GCCTGCCTCACCCGCCCCAC

Downstream 100 bases:

>100_bases
GGCCGGCCGGCGCCCGGCTGCGGGCCGGGCCCGCGCGCCGACGCGAGGCCCACGCGCCCTCCGGCGATGCCCGAGCGCGT
CGCGCTGGGCGTCCGGCCCT

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSITSLLVDSLPVLAQGAVLTVKFAVLSMVFGLIAAVVLALMGIAHSRVLNAIARVYVSLMRGTPLLVQIFVIYYGLPSL
GISLDPTPAGVIALSANVAAYMSESMRGAINGIESGQWLASYSLGLSWSQTLRYVIGPQALRIAVPSLSNSLISLIKDTS
LVSVITVTELLRSAQEIIASTYQPLPLYLAAAAVYWVLCQILEWVQRWCERRLALPGRY

Sequences:

>Translated_219_residues
MSITSLLVDSLPVLAQGAVLTVKFAVLSMVFGLIAAVVLALMGIAHSRVLNAIARVYVSLMRGTPLLVQIFVIYYGLPSL
GISLDPTPAGVIALSANVAAYMSESMRGAINGIESGQWLASYSLGLSWSQTLRYVIGPQALRIAVPSLSNSLISLIKDTS
LVSVITVTELLRSAQEIIASTYQPLPLYLAAAAVYWVLCQILEWVQRWCERRLALPGRY
>Mature_218_residues
SITSLLVDSLPVLAQGAVLTVKFAVLSMVFGLIAAVVLALMGIAHSRVLNAIARVYVSLMRGTPLLVQIFVIYYGLPSLG
ISLDPTPAGVIALSANVAAYMSESMRGAINGIESGQWLASYSLGLSWSQTLRYVIGPQALRIAVPSLSNSLISLIKDTSL
VSVITVTELLRSAQEIIASTYQPLPLYLAAAAVYWVLCQILEWVQRWCERRLALPGRY

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=209, Percent_Identity=47.3684210526316, Blast_Score=198, Evalue=3e-52,
Organism=Escherichia coli, GI1787030, Length=208, Percent_Identity=37.9807692307692, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1787086, Length=217, Percent_Identity=34.1013824884793, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1788646, Length=211, Percent_Identity=29.3838862559242, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1787087, Length=223, Percent_Identity=32.2869955156951, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1788645, Length=209, Percent_Identity=33.0143540669856, Blast_Score=101, Evalue=3e-23,
Organism=Escherichia coli, GI87082239, Length=206, Percent_Identity=30.5825242718447, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1786873, Length=218, Percent_Identity=31.651376146789, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1786874, Length=215, Percent_Identity=24.6511627906977, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI48994930, Length=171, Percent_Identity=30.4093567251462, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23624; Mature: 23493

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITSLLVDSLPVLAQGAVLTVKFAVLSMVFGLIAAVVLALMGIAHSRVLNAIARVYVSL
CCHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAINGIESGQWLA
HCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHH
SYSLGLSWSQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIAS
HHHCCCCHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYQPLPLYLAAAAVYWVLCQILEWVQRWCERRLALPGRY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SITSLLVDSLPVLAQGAVLTVKFAVLSMVFGLIAAVVLALMGIAHSRVLNAIARVYVSL
CHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAINGIESGQWLA
HCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHH
SYSLGLSWSQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIAS
HHHCCCCHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYQPLPLYLAAAAVYWVLCQILEWVQRWCERRLALPGRY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]