| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is aat [H]
Identifier: 238027534
GI number: 238027534
Start: 2131851
End: 2132594
Strand: Direct
Name: aat [H]
Synonym: bglu_1g19520
Alternate gene names: 238027534
Gene position: 2131851-2132594 (Clockwise)
Preceding gene: 238027533
Following gene: 238027535
Centisome position: 54.57
GC content: 72.31
Gene sequence:
>744_bases ATGGTCCCCTGGCTCGCCCCCGACGCTCCGTTCCCATCCGTCGAGCGCGCGCTCGGCCCCGCGAGCGGCGCGCCGGGCCT GCTCGCCGCGAGCGCCGAACTGCACCCGGCGCGCGTGGCCGACGCCTACCATCGCGGCATCTTTCCGTGGTACTCCGACG GCCAGCCCGTGCTCTGGTGGAGCCCCGACCCGCGCATGATCCTGGTGCCGGCCGAGTTTCGCGTCTCGACCACGTTCCGC AAGACGCTGCGCCGCGTAATGCGCGACGCGCGCTGGGAAGTCCGCGTCGACGCCGACTTCGCCGCCGTGATGCGTGCCTG CGCGCAGGCACCGCGGCCGGGCCAGCGCGGCACCTGGATCACCGACGAGATCGTCGCCGCCTACACGGCGCTGCACCGCG CCGGCAACGCGCACAGCGTCGAGACCTGGTTCGACGGCAAGCGCGTCGGCGGACTCTACGGTGTCGCATTCGGCCGGATG TTCTTCGGCGAATCGATGTTCGCGCATGCCACCGACGCCTCCAAGATCGCGCTCGCCGCGCTCGTCGCCCATCTGCTCGA GCACGGCGTCGAGATGATCGACTGCCAGCAGAACACCAGCCACCTCGCCTCGCTCGGCGGCCGCGAAATCGACCGCCGTC GCTTCGTCGCTCACGTGCGCGCCGCCACCGGCGAGCCCGGCATTCCCTGGCGCTTCGACAAGCAGGTGCTCGTGCGCCTG ACCGGCGCGGCCGAGGCCGGCTGA
Upstream 100 bases:
>100_bases CGCTGCGCCTGTTCTTCGCCGATCGCGAAGCCGGCTCGTTCGGCGTGCATACCGGCGATATCTTCCGCTCGCTGCGCAAC GGCTGACACGCGGCACCGGC
Downstream 100 bases:
>100_bases GGCCGGCGCGCGCCAGGCCGGACCGGAGCCGCCCCAGCGCGGCCGGCGGCCCGGCTAGGCACCCGGCGGCCATCACAAAA TCGCGCCGAATCGGCCGCCC
Product: Leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase [H]
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MVPWLAPDAPFPSVERALGPASGAPGLLAASAELHPARVADAYHRGIFPWYSDGQPVLWWSPDPRMILVPAEFRVSTTFR KTLRRVMRDARWEVRVDADFAAVMRACAQAPRPGQRGTWITDEIVAAYTALHRAGNAHSVETWFDGKRVGGLYGVAFGRM FFGESMFAHATDASKIALAALVAHLLEHGVEMIDCQQNTSHLASLGGREIDRRRFVAHVRAATGEPGIPWRFDKQVLVRL TGAAEAG
Sequences:
>Translated_247_residues MVPWLAPDAPFPSVERALGPASGAPGLLAASAELHPARVADAYHRGIFPWYSDGQPVLWWSPDPRMILVPAEFRVSTTFR KTLRRVMRDARWEVRVDADFAAVMRACAQAPRPGQRGTWITDEIVAAYTALHRAGNAHSVETWFDGKRVGGLYGVAFGRM FFGESMFAHATDASKIALAALVAHLLEHGVEMIDCQQNTSHLASLGGREIDRRRFVAHVRAATGEPGIPWRFDKQVLVRL TGAAEAG >Mature_247_residues MVPWLAPDAPFPSVERALGPASGAPGLLAASAELHPARVADAYHRGIFPWYSDGQPVLWWSPDPRMILVPAEFRVSTTFR KTLRRVMRDARWEVRVDADFAAVMRACAQAPRPGQRGTWITDEIVAAYTALHRAGNAHSVETWFDGKRVGGLYGVAFGRM FFGESMFAHATDASKIALAALVAHLLEHGVEMIDCQQNTSHLASLGGREIDRRRFVAHVRAATGEPGIPWRFDKQVLVRL TGAAEAG
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine [H]
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family [H]
Homologues:
Organism=Escherichia coli, GI1787111, Length=210, Percent_Identity=43.8095238095238, Blast_Score=176, Evalue=1e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR004616 [H]
Pfam domain/function: PF03588 Leu_Phe_trans [H]
EC number: =2.3.2.6 [H]
Molecular weight: Translated: 27108; Mature: 27108
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPWLAPDAPFPSVERALGPASGAPGLLAASAELHPARVADAYHRGIFPWYSDGQPVLWW CCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCEECCCCEEEEE SPDPRMILVPAEFRVSTTFRKTLRRVMRDARWEVRVDADFAAVMRACAQAPRPGQRGTWI CCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCH TDEIVAAYTALHRAGNAHSVETWFDGKRVGGLYGVAFGRMFFGESMFAHATDASKIALAA HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHH LVAHLLEHGVEMIDCQQNTSHLASLGGREIDRRRFVAHVRAATGEPGIPWRFDKQVLVRL HHHHHHHCCCCEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEECCEEEEEE TGAAEAG ECCCCCC >Mature Secondary Structure MVPWLAPDAPFPSVERALGPASGAPGLLAASAELHPARVADAYHRGIFPWYSDGQPVLWW CCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCEECCCCEEEEE SPDPRMILVPAEFRVSTTFRKTLRRVMRDARWEVRVDADFAAVMRACAQAPRPGQRGTWI CCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCH TDEIVAAYTALHRAGNAHSVETWFDGKRVGGLYGVAFGRMFFGESMFAHATDASKIALAA HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHH LVAHLLEHGVEMIDCQQNTSHLASLGGREIDRRRFVAHVRAATGEPGIPWRFDKQVLVRL HHHHHHHCCCCEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEECCEEEEEE TGAAEAG ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA